MGE detailed information
MGE type: IScluster/Tn MGE length: 8209 bp
Accession: NZ_CP038311 Location: 25409..33617 Organism: Escherichia coli O157:H7 strain Show KS 470-1 Replicon: plasmid pKS470-3
Accession: NZ_CP038311 Location: 25409..33617 Organism: Escherichia coli O157:H7 strain Show KS 470-1 Replicon: plasmid pKS470-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U84_RS28155 () | 20680..21000 | - | 321 | WP_001000143.1 | VirB3 family type IV secretion system protein | - |
| E4U84_RS28160 () | 21058..21351 | - | 294 | WP_001031682.1 | TrbC/VirB2 family protein | - |
| E4U84_RS28165 () | 21344..21955 | - | 612 | WP_000603936.1 | lytic transglycosylase domain-containing protein | - |
| E4U84_RS28170 () | 22288..23283 | + | 996 | WP_001103652.1 | type IV secretion system protein | - |
| E4U84_RS28175 () | 23285..23926 | + | 642 | WP_000844300.1 | conjugal transfer protein TrbJ | - |
| E4U84_RS28180 () | 23939..24172 | + | 234 | WP_001056370.1 | EexN family lipoprotein | - |
| E4U84_RS28185 () | 24213..24500 | - | 288 | WP_000332248.1 | helix-turn-helix transcriptional regulator | - |
| E4U84_RS28190 () | 24699..25037 | + | 339 | WP_000612441.1 | helix-turn-helix domain-containing protein | - |
| E4U84_RS28195 () | 25409..25789 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E4U84_RS28200 () | 25786..26133 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U84_RS28205 () | 26183..27721 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U84_RS28210 () | 27905..28909 | - | 1005 | WP_001208090.1 | replication initiation protein | - |
| E4U84_RS28215 () | 30589..30912 | + | 324 | WP_000432877.1 | hypothetical protein | - |
| E4U84_RS28220 () | 30953..31177 | + | 225 | WP_000866040.1 | hypothetical protein | - |
| E4U84_RS28225 () | 31273..31497 | + | 225 | WP_000749828.1 | hypothetical protein | - |
| E4U84_RS28230 () | 31548..31814 | + | 267 | WP_000702249.1 | hypothetical protein | Toxin Detail |
| E4U84_RS28235 () | 31804..32046 | + | 243 | WP_001450803.1 | hypothetical protein | Antitoxin Detail |
| E4U84_RS28240 () | 32430..33617 | - | 1188 | WP_171878221.1 | IS91 family transposase ISEc37 | Transposase |
| E4U84_RS28245 () | 33617..33982 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| E4U84_RS28250 () | 34314..34592 | + | 279 | WP_000545936.1 | hypothetical protein | - |
| E4U84_RS28255 () | 35031..35213 | + | 183 | WP_000833471.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| E4U84_RS28260 () | 35238..35675 | + | 438 | WP_000466317.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| E4U84_RS28265 () | 35704..36408 | - | 705 | WP_001279866.1 | hypothetical protein | - |
| E4U84_RS28270 () | 36405..37166 | - | 762 | WP_001097937.1 | conjugal transfer protein TraL | - |
| E4U84_RS28275 () | 37176..37583 | - | 408 | WP_001190619.1 | hypothetical protein | - |
| E4U84_RS28280 () | 37929..38267 | + | 339 | WP_000753495.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|