MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66022 bp
Accession: NZ_CP038298 Location: 1..66022 Organism: Escherichia coli O157:H7 strain TB182A Replicon: plasmid pTB182A-4
Accession: NZ_CP038298 Location: 1..66022 Organism: Escherichia coli O157:H7 strain TB182A Replicon: plasmid pTB182A-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3171_RS25145 () | 215..879 | + | 665 | Protein_1 | tyrosine-type recombinase/integrase | - |
| E3171_RS25150 () | 1602..2927 | + | 1326 | WP_001025657.1 | hypothetical protein | VF |
| E3171_RS25155 () | 3076..3359 | + | 284 | Protein_3 | YkgJ family cysteine cluster protein | - |
| E3171_RS25165 () | 5230..5667 | - | 438 | WP_000273581.1 | hypothetical protein | - |
| E3171_RS25170 () | 5916..6095 | - | 180 | WP_000526857.1 | hypothetical protein | - |
| E3171_RS25175 () | 6298..6672 | + | 375 | WP_001368887.1 | hypothetical protein | - |
| E3171_RS25180 () | 6983..7144 | - | 162 | Protein_8 | epoxyqueuosine reductase QueH | - |
| E3171_RS25185 () | 7195..7335 | + | 141 | Protein_9 | serine/threonine protein kinase | - |
| E3171_RS25190 () | 7459..8199 | + | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| E3171_RS25195 () | 8483..9460 | - | 978 | WP_000361616.1 | RepB family plasmid replication initiator protein | - |
| E3171_RS25200 () | 10106..10511 | - | 406 | Protein_12 | DDE-type integrase/transposase/recombinase | - |
| E3171_RS25205 () | 10513..10800 | - | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3171_RS25210 () | 10797..11048 | - | 252 | WP_001132893.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| E3171_RS25215 () | 11437..12642 | + | 1206 | WP_000817637.1 | Plasmid partition protein A | VF |
| E3171_RS25220 () | 12639..13601 | + | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| E3171_RS25225 () | 13742..14753 | - | 1012 | Protein_17 | DUF4113 domain-containing protein | - |
| E3171_RS25230 () | 14784..15200 | + | 417 | Protein_18 | DUF1281 domain-containing protein | - |
| E3171_RS25235 () | 15204..15509 | + | 306 | WP_032163448.1 | hypothetical protein | - |
| E3171_RS25240 () | 15586..16269 | + | 684 | WP_000085942.1 | DNA methylase | - |
| E3171_RS25245 () | 16270..16491 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| E3171_RS25250 () | 16503..16937 | + | 435 | WP_000274489.1 | DUF1380 family protein | - |
| E3171_RS25255 () | 16983..17208 | + | 226 | Protein_23 | hypothetical protein | - |
| E3171_RS25260 () | 17632..18203 | + | 572 | Protein_24 | YubH family protein | - |
| E3171_RS25265 () | 18299..18577 | + | 279 | WP_072131700.1 | antirestriction protein | - |
| E3171_RS25270 () | 18624..19046 | + | 423 | WP_000271758.1 | DUF1380 family protein | - |
| E3171_RS25275 () | 19043..19234 | + | 192 | WP_001024835.1 | hypothetical protein | - |
| E3171_RS25280 () | 19317..19685 | + | 369 | WP_049806405.1 | hypothetical protein | - |
| E3171_RS25285 () | 19733..19939 | + | 207 | WP_000275846.1 | hypothetical protein | - |
| E3171_RS25290 () | 19964..20251 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| E3171_RS25295 () | 20370..21191 | + | 822 | WP_001234472.1 | DUF945 domain-containing protein | - |
| E3171_RS25300 () | 21470..22810 | + | 1341 | WP_001130323.1 | IS4 family transposase ISCro3 | Transposase |
| E3171_RS25305 () | 22931..23521 | - | 591 | WP_013009334.1 | hypothetical protein | VF |
| E3171_RS25310 () | 23854..24237 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| E3171_RS25315 () | 24424..25113 | + | 690 | Protein_35 | conjugal transfer transcriptional regulator TraJ | - |
| E3171_RS25320 () | 25212..25607 | + | 396 | WP_013009335.1 | conjugal transfer relaxosome protein TraY | - |
| E3171_RS25325 () | 25640..26004 | + | 365 | Protein_37 | type IV conjugative transfer system pilin TraA | - |
| E3171_RS25330 () | 26019..26330 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| E3171_RS25335 () | 26352..26918 | + | 567 | WP_000399770.1 | type IV conjugative transfer system protein TraE | - |
| E3171_RS25340 () | 26905..27405 | + | 501 | Protein_40 | type-F conjugative transfer system secretin TraK | - |
| E3171_RS25345 () | 27436..28182 | + | 747 | Protein_41 | conjugative transfer relaxase/helicase TraI | - |
| E3171_RS25350 () | 28182..28643 | + | 462 | WP_077630452.1 | conjugal transfer protein TraI | - |
| E3171_RS25355 () | 28663..29409 | + | 747 | WP_000205758.1 | conjugal transfer pilus acetylase TraX | - |
| E3171_RS25360 () | 29464..30024 | + | 561 | WP_000139371.1 | fertility inhibition protein FinO | - |
| E3171_RS25365 () | 30159..30364 | + | 206 | Protein_45 | hypothetical protein | - |
| E3171_RS25370 () | 30610..31004 | + | 395 | Protein_46 | thermonuclease family protein | - |
| E3171_RS25375 () | 31367..31510 | - | 144 | Protein_47 | IS3 family transposase | - |
| E3171_RS25380 () | 31513..31656 | - | 144 | Protein_48 | IS3 family transposase IS911 | Transposase |
| E3171_RS25385 () | 31734..32407 | + | 674 | Protein_49 | DDE-type integrase/transposase/recombinase | - |
| E3171_RS25390 () | 32853..35513 | + | 2661 | WP_000770129.1 | Metalloprotease StcE | VF |
| E3171_RS25395 () | 35597..36472 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| E3171_RS25400 () | 36473..38443 | + | 1971 | WP_013009342.1 | Type II secretion system protein D | VF |
| E3171_RS25405 () | 38440..39942 | + | 1503 | WP_001418198.1 | Type II secretion system protein E | VF |
| E3171_RS25410 () | 39944..41167 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| E3171_RS25415 () | 41198..41632 | + | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| E3171_RS25420 () | 41629..42180 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| E3171_RS25425 () | 42195..42542 | + | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| E3171_RS25430 () | 42539..43138 | + | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| E3171_RS25435 () | 43135..44112 | + | 978 | WP_000842183.1 | Putative type II secretion system protein K | VF |
| E3171_RS25440 () | 44151..45323 | + | 1173 | WP_071526091.1 | Type II secretion system protein L | VF |
| E3171_RS25445 () | 45310..45825 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| E3171_RS25450 () | 45877..46710 | + | 834 | WP_000088803.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E3171_RS25455 () | 46804..47205 | + | 402 | WP_001222321.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3171_RS25460 () | 47280..47495 | + | 216 | Protein_64 | IS3 family transposase IS1203 | Transposase |
| E3171_RS25465 () | 47794..48087 | + | 294 | Protein_65 | hypothetical protein | - |
| E3171_RS25470 () | 48316..48564 | + | 249 | WP_000083841.1 | replication regulatory protein RepA | - |
| E3171_RS25475 () | 48587..48694 | + | 108 | Protein_67 | incFII family plasmid replication initiator RepA | - |
| E3171_RS25480 () | 49395..49553 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| E3171_RS25485 () | 49608..49877 | + | 270 | WP_000079946.1 | hypothetical protein | Antitoxin Detail |
| E3171_RS25490 () | 49874..50155 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3171_RS25495 () | 50351..50692 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| E3171_RS25500 () | 50992..51579 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| E3171_RS25505 () | 51861..52454 | - | 594 | WP_000517696.1 | hypothetical protein | - |
| E3171_RS25510 () | 52808..54154 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| E3171_RS25515 () | 54433..56313 | + | 1881 | WP_001283342.1 | colicin 1A | - |
| E3171_RS25520 () | 56335..56670 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| E3171_RS25525 () | 56799..57146 | + | 348 | WP_000142440.1 | hypothetical protein | - |
| E3171_RS25530 () | 57164..57754 | - | 591 | WP_000194567.1 | hypothetical protein | - |
| E3171_RS25535 () | 57874..58515 | - | 642 | WP_000470626.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| E3171_RS25540 () | 58670..61648 | + | 2979 | WP_000124031.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| E3171_RS25545 () | 61726..62130 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| E3171_RS25550 () | 62127..62474 | + | 348 | WP_000612550.1 | IS66 family transposase ISKpn24 | Transposase |
| E3171_RS25555 () | 62523..64061 | + | 1539 | WP_000099187.1 | IS66 family transposase ISEc22 | Transposase |
| E3171_RS25560 () | 64143..64583 | + | 441 | WP_072141484.1 | recombinase family protein | - |
| E3171_RS25565 () | 64564..65271 | + | 708 | Protein_85 | Tn3 family transposase TnpA_ISPa40 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|