MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 107717 bp
Accession: NZ_CP038276 Location: 1..107717 Organism: Raoultella ornithinolytica strain WLK218 Replicon: plasmid pWLK-107717
Accession: NZ_CP038276 Location: 1..107717 Organism: Raoultella ornithinolytica strain WLK218 Replicon: plasmid pWLK-107717
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4K08_RS00640 () | 106..1053 | + | 948 | WP_031285326.1 | IS30 family transposase ISAeca1 | Transposase |
| E4K08_RS00645 () | 1170..1370 | - | 201 | WP_060415469.1 | TraY domain-containing protein | - |
| E4K08_RS00650 () | 1455..2156 | - | 702 | WP_137055841.1 | hypothetical protein | - |
| E4K08_RS00655 () | 2395..2787 | - | 393 | WP_032736874.1 | relaxosome protein TraM | - |
| E4K08_RS00660 () | 3219..3695 | + | 477 | WP_076752132.1 | hypothetical protein | VF |
| E4K08_RS00665 () | 3733..4263 | - | 531 | WP_076752134.1 | antirestriction protein | - |
| E4K08_RS00670 () | 4455..4685 | + | 231 | WP_076752135.1 | hypothetical protein | - |
| E4K08_RS00680 () | 4889..5722 | - | 834 | WP_076752137.1 | N-6 DNA methylase | - |
| E4K08_RS00685 () | 5769..5999 | - | 231 | WP_076752138.1 | hypothetical protein | - |
| E4K08_RS00690 () | 6088..6435 | - | 348 | WP_076752140.1 | hypothetical protein | - |
| E4K08_RS00695 () | 6538..6810 | - | 273 | WP_137055850.1 | hypothetical protein | - |
| E4K08_RS00700 () | 7700..8116 | - | 417 | WP_076752145.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| E4K08_RS00705 () | 8113..8424 | - | 312 | WP_076752146.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| E4K08_RS00710 () | 8574..8786 | - | 213 | WP_076752148.1 | hypothetical protein | - |
| E4K08_RS00715 () | 8894..9220 | - | 327 | WP_076752150.1 | hypothetical protein | - |
| E4K08_RS00720 () | 10079..10237 | - | 159 | WP_076752152.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4K08_RS00725 () | 10579..11064 | - | 486 | WP_076752153.1 | GNAT family N-acetyltransferase | Toxin Detail |
| E4K08_RS00730 () | 11052..11318 | - | 267 | WP_012540086.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| E4K08_RS00735 () | 11619..11942 | + | 324 | WP_013087171.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| E4K08_RS00740 () | 11944..12657 | + | 714 | WP_013087170.1 | arsenical resistance protein ArsH | - |
| E4K08_RS00745 () | 12666..13211 | + | 546 | WP_047365773.1 | sigma-70 family RNA polymerase sigma factor | - |
| E4K08_RS00750 () | 13287..13649 | + | 363 | WP_013087168.1 | arsenic metallochaperone ArsD family protein | - |
| E4K08_RS00755 () | 13676..15427 | + | 1752 | WP_175406650.1 | Arsenical pump-driving ATPase | VF |
| E4K08_RS00760 () | 15552..16088 | + | 537 | WP_013087166.1 | Phosphinothricin N-acetyltransferase | VF |
| E4K08_RS00765 () | 16123..16548 | - | 426 | WP_013087165.1 | glutaredoxin-dependent arsenate reductase | - |
| E4K08_RS00770 () | 16561..17850 | - | 1290 | WP_012540054.1 | arsenite efflux transporter membrane subunit ArsB | - |
| E4K08_RS00775 () | 17898..19649 | - | 1752 | WP_137055843.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| E4K08_RS00780 () | 19667..20029 | - | 363 | WP_012540111.1 | arsenite efflux transporter metallochaperone ArsD | - |
| E4K08_RS00785 () | 20077..20427 | - | 351 | WP_012540252.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| E4K08_RS00795 () | 22203..22529 | - | 327 | WP_038992719.1 | hypothetical protein | - |
| E4K08_RS00800 () | 22526..23254 | - | 729 | WP_040107916.1 | plasmid SOS inhibition protein A | - |
| E4K08_RS00805 () | 23251..23682 | - | 432 | WP_038992715.1 | conjugation system SOS inhibitor PsiB | - |
| E4K08_RS00810 () | 23727..25726 | - | 2000 | Protein_34 | ParB/RepB/Spo0J family partition protein | - |
| E4K08_RS00815 () | 25795..26043 | - | 249 | WP_004206771.1 | DUF905 domain-containing protein | - |
| E4K08_RS00820 () | 26092..26634 | - | 543 | WP_004206772.1 | single-stranded DNA-binding protein | - |
| E4K08_RS00830 () | 27223..27543 | - | 321 | WP_032426243.1 | hypothetical protein | - |
| E4K08_RS00835 () | 27578..27832 | - | 255 | WP_137055844.1 | DNA polymerase III subunit theta | - |
| E4K08_RS00840 () | 28069..28494 | - | 426 | WP_004206777.1 | antirestriction protein | - |
| E4K08_RS00845 () | 29015..29245 | - | 231 | WP_004206779.1 | hypothetical protein | - |
| E4K08_RS00850 () | 29460..29885 | + | 426 | WP_009309980.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E4K08_RS00855 () | 29885..31156 | + | 1272 | WP_137055845.1 | Y-family DNA polymerase | - |
| E4K08_RS00860 () | 31235..31486 | + | 252 | WP_004206783.1 | plasmid stabilization protein | - |
| E4K08_RS00865 () | 31540..31845 | + | 306 | WP_047368871.1 | hypothetical protein | - |
| E4K08_RS00880 () | 33171..34142 | - | 972 | WP_076752159.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E4K08_RS00885 () | 34142..35308 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| E4K08_RS00890 () | 36059..37069 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| E4K08_RS00895 () | 37767..38507 | - | 741 | WP_022064517.1 | tyrosine-type recombinase/integrase | - |
| E4K08_RS30530 () | 38540..38815 | + | 276 | WP_155075503.1 | hypothetical protein | - |
| E4K08_RS00905 () | 39155..39421 | - | 267 | WP_063923542.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| E4K08_RS00910 () | 39652..41091 | - | 1440 | WP_137055846.1 | DNA repair protein | - |
| E4K08_RS00915 () | 41177..42208 | + | 1032 | WP_001395480.1 | IS630 family transposase ISEc33 | Transposase |
| E4K08_RS00920 () | 42229..42480 | - | 252 | Protein_53 | DNA repair protein | - |
| E4K08_RS00930 () | 43045..43854 | - | 810 | WP_047727565.1 | hypothetical protein | - |
| E4K08_RS00935 () | 43872..44234 | - | 363 | WP_000533745.1 | hypothetical protein | - |
| E4K08_RS00945 () | 44796..45416 | + | 621 | WP_042015168.1 | hypothetical protein | - |
| E4K08_RS00950 () | 45680..47053 | + | 1374 | WP_042015169.1 | hypothetical protein | - |
| E4K08_RS00955 () | 47171..48094 | - | 924 | WP_052433692.1 | J domain-containing protein | - |
| E4K08_RS00960 () | 48176..48430 | - | 255 | WP_042015188.1 | hypothetical protein | - |
| E4K08_RS00965 () | 49025..51706 | - | 2682 | WP_042015172.1 | hypothetical protein | - |
| E4K08_RS00970 () | 52065..53147 | + | 1083 | WP_042015191.1 | hypothetical protein | - |
| E4K08_RS00975 () | 53149..55368 | + | 2220 | WP_052251511.1 | PifA | - |
| E4K08_RS00990 () | 56676..56892 | + | 217 | Protein_63 | hypothetical protein | - |
| E4K08_RS00995 () | 57136..57570 | + | 435 | WP_042015176.1 | hypothetical protein | - |
| E4K08_RS01000 () | 57551..57838 | + | 288 | WP_135735349.1 | hypothetical protein | - |
| E4K08_RS01005 () | 58416..59819 | + | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| E4K08_RS01010 () | 59848..60480 | - | 633 | WP_001567369.1 | hypothetical protein | - |
| E4K08_RS01015 () | 60915..61919 | - | 1005 | Protein_68 | IS110 family transposase IS4321R | Transposase |
| E4K08_RS01020 () | 61998..62555 | - | 558 | WP_003100847.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| E4K08_RS01025 () | 62549..62920 | - | 372 | WP_003100853.1 | hypothetical protein | - |
| E4K08_RS01030 () | 62917..63417 | - | 501 | WP_003100856.1 | hypothetical protein | - |
| E4K08_RS01035 () | 63414..63740 | - | 327 | WP_003100858.1 | hypothetical protein | - |
| E4K08_RS01040 () | 63995..64351 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| E4K08_RS01045 () | 64341..64742 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| E4K08_RS01050 () | 64739..65029 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| E4K08_RS01060 () | 65228..65932 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E4K08_RS01065 () | 65985..67031 | - | 1047 | Protein_77 | 1,4-alpha-glucan branching enzyme | - |
| E4K08_RS01070 () | 67404..68372 | + | 969 | WP_004099053.1 | IS5 family transposase IS903B | Transposase |
| E4K08_RS01075 () | 68691..69716 | - | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| E4K08_RS01080 () | 69803..70345 | - | 543 | Protein_80 | NADH:flavin oxidoreductase | - |
| E4K08_RS01085 () | 70326..70795 | - | 470 | Protein_81 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| E4K08_RS01095 () | 71802..72608 | - | 807 | WP_099973685.1 | incFII family plasmid replication initiator RepA | - |
| E4K08_RS01100 () | 72667..72738 | - | 72 | WP_009653899.1 | RepA leader peptide Tap | - |
| E4K08_RS01110 () | 72956..73225 | - | 270 | WP_032736837.1 | replication regulatory protein RepA | - |
| E4K08_RS01115 () | 73363..73905 | - | 543 | WP_032736899.1 | Phospholipase D | VF |
| E4K08_RS01120 () | 74095..74349 | - | 255 | Protein_86 | hypothetical protein | - |
| E4K08_RS01125 () | 74389..75180 | - | 792 | WP_137055847.1 | DsbA family protein | - |
| E4K08_RS01130 () | 75330..75920 | - | 591 | WP_009651737.1 | fertility inhibition protein FinO | - |
| E4K08_RS01135 () | 76077..76802 | - | 726 | WP_064386205.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E4K08_RS01140 () | 76885..82143 | - | 5259 | WP_075606914.1 | Multifunctional conjugation protein TraI | Relaxase |
| E4K08_RS01145 () | 82143..84461 | - | 2319 | WP_075606915.1 | type IV conjugative transfer system coupling protein TraD | - |
| E4K08_RS01150 () | 84580..84966 | - | 387 | WP_053390238.1 | hypothetical protein | - |
| E4K08_RS01155 () | 85518..86189 | - | 672 | WP_088883382.1 | hypothetical protein | - |
| E4K08_RS01160 () | 86206..89061 | - | 2856 | WP_075606917.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E4K08_RS01165 () | 89061..90431 | - | 1371 | WP_075606918.1 | conjugal transfer protein TraH | - |
| E4K08_RS01170 () | 90418..90978 | - | 561 | WP_039698500.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E4K08_RS01175 () | 90953..91189 | - | 237 | WP_053390221.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E4K08_RS01180 () | 91200..91952 | - | 753 | WP_053390220.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E4K08_RS01185 () | 91973..92299 | - | 327 | WP_053390219.1 | hypothetical protein | - |
| E4K08_RS01190 () | 92345..92587 | - | 243 | WP_053390218.1 | conjugal transfer protein TrbE | - |
| E4K08_RS01195 () | 92577..93188 | - | 612 | WP_053390217.1 | hypothetical protein | - |
| E4K08_RS01200 () | 93181..93441 | - | 261 | WP_053390216.1 | hypothetical protein | - |
| E4K08_RS01205 () | 93473..95428 | - | 1956 | WP_064359956.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E4K08_RS01210 () | 95425..95808 | - | 384 | WP_053390297.1 | hypothetical protein | - |
| E4K08_RS01215 () | 95805..96452 | - | 648 | WP_064343536.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E4K08_RS01220 () | 96465..97457 | - | 993 | WP_053390276.1 | conjugal transfer pilus assembly protein TraU | - |
| E4K08_RS01225 () | 97468..98094 | - | 627 | WP_064343535.1 | type-F conjugative transfer system protein TraW | - |
| E4K08_RS01230 () | 98091..98483 | - | 393 | WP_064343534.1 | type-F conjugative transfer system protein TrbI | - |
| E4K08_RS01235 () | 98483..101122 | - | 2640 | WP_137055848.1 | type IV secretion system protein TraC | - |
| E4K08_RS01240 () | 101215..101598 | - | 384 | WP_042946290.1 | hypothetical protein | - |
| E4K08_RS01245 () | 101686..101985 | - | 300 | WP_032736863.1 | hypothetical protein | - |
| E4K08_RS01250 () | 101982..102200 | - | 219 | WP_087498964.1 | hypothetical protein | - |
| E4K08_RS01255 () | 102467..102655 | - | 189 | WP_053390286.1 | hypothetical protein | - |
| E4K08_RS01260 () | 103268..103852 | - | 585 | WP_064343530.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E4K08_RS01265 () | 103886..104320 | - | 435 | WP_020322358.1 | TraP protein | - |
| E4K08_RS01270 () | 104313..105734 | - | 1422 | WP_137055849.1 | conjugal transfer protein TraB | - |
| E4K08_RS01275 () | 105734..106468 | - | 735 | WP_032736867.1 | type-F conjugative transfer system secretin TraK | - |
| E4K08_RS01280 () | 106455..107021 | - | 567 | WP_032736869.1 | type IV conjugative transfer system protein TraE | - |
| E4K08_RS01285 () | 107041..107346 | - | 306 | WP_032736870.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|