MGE detailed information
MGE type: Prophage MGE length: 44104 bp
Accession: NZ_CP038268 Location: 312837..356940 Organism: Staphylococcus aureus strain O55 isolate B118 Replicon: chromosome
Accession: NZ_CP038268 Location: 312837..356940 Organism: Staphylococcus aureus strain O55 isolate B118 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SaO55_RS01380 () | 307975..308643 | + | 669 | WP_000936725.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| SaO55_RS01385 () | 308773..310086 | - | 1314 | WP_001077708.1 | YjiH family protein | - |
| SaO55_RS01390 () | 310504..310707 | + | 204 | WP_135789114.1 | YSIRK-type signal peptide-containing protein | - |
| SaO55_RS01395 () | 310719..310958 | + | 240 | Protein_258 | hypothetical protein | - |
| SaO55_RS01400 () | 310989..312743 | + | 1755 | Protein_259 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| SaO55_RS01405 () | 312837..314042 | - | 1206 | WP_135789115.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SaO55_RS01410 () | 314332..315216 | - | 885 | WP_001025527.1 | hypothetical protein | - |
| SaO55_RS01415 () | 315510..315731 | - | 222 | Protein_262 | hypothetical protein | - |
| SaO55_RS01420 () | 315749..316210 | - | 462 | WP_135789116.1 | ImmA/IrrE family metallo-endopeptidase | - |
| SaO55_RS01425 () | 316223..316552 | - | 330 | WP_000429766.1 | helix-turn-helix domain-containing protein | - |
| SaO55_RS01430 () | 316713..316904 | + | 192 | WP_135789117.1 | helix-turn-helix domain-containing protein | - |
| SaO55_RS14440 () | 316992..317168 | + | 177 | WP_001001356.1 | hypothetical protein | - |
| SaO55_RS01435 () | 317165..317404 | - | 240 | WP_001548903.1 | hypothetical protein | - |
| SaO55_RS01440 () | 317451..317666 | + | 216 | WP_001036299.1 | hypothetical protein | - |
| SaO55_RS01445 () | 317691..317954 | + | 264 | WP_001124195.1 | IS3 family transposase ISVa4 | Transposase |
| SaO55_RS01450 () | 317967..318128 | + | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| SaO55_RS01455 () | 318206..318529 | + | 324 | WP_000174996.1 | hypothetical protein | - |
| SaO55_RS01460 () | 318544..318906 | + | 363 | WP_000985974.1 | hypothetical protein | - |
| SaO55_RS01465 () | 318903..320069 | + | 1167 | WP_135789118.1 | DUF2800 domain-containing protein | - |
| SaO55_RS01470 () | 320095..320652 | + | 558 | WP_000645044.1 | DUF2815 family protein | - |
| SaO55_RS01475 () | 320722..322674 | + | 1953 | WP_078103306.1 | DNA polymerase | - |
| SaO55_RS01480 () | 322687..322872 | + | 186 | WP_001164629.1 | DUF3113 family protein | - |
| SaO55_RS01485 () | 322872..323273 | + | 402 | WP_000113977.1 | PVL family protein | - |
| SaO55_RS01490 () | 323273..323527 | + | 255 | WP_031915842.1 | DUF3310 domain-containing protein | - |
| SaO55_RS01495 () | 323527..323775 | + | 249 | WP_135789263.1 | hypothetical protein | - |
| SaO55_RS01500 () | 323788..324213 | + | 426 | WP_044122121.1 | hypothetical protein | - |
| SaO55_RS01505 () | 324210..324404 | + | 195 | WP_000983952.1 | hypothetical protein | - |
| SaO55_RS01510 () | 324401..324838 | + | 438 | WP_044122119.1 | hypothetical protein | - |
| SaO55_RS01515 () | 324835..325119 | + | 285 | WP_001105603.1 | hypothetical protein | - |
| SaO55_RS01520 () | 325112..325363 | + | 252 | WP_001065074.1 | DUF1024 family protein | Toxin Detail |
| SaO55_RS14445 () | 325353..325526 | + | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| SaO55_RS01525 () | 325527..325808 | + | 282 | WP_000454994.1 | hypothetical protein | - |
| SaO55_RS14450 () | 325809..325970 | + | 162 | WP_000889682.1 | hypothetical protein | - |
| SaO55_RS01530 () | 325985..326518 | + | 534 | Protein_288 | dUTPase | - |
| SaO55_RS01535 () | 326555..326800 | + | 246 | WP_001282074.1 | hypothetical protein | - |
| SaO55_RS01540 () | 326797..327003 | + | 207 | WP_031794884.1 | DUF1381 domain-containing protein | - |
| SaO55_RS01545 () | 327000..327152 | + | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| SaO55_RS01550 () | 327220..327420 | + | 201 | WP_115207349.1 | DUF1514 family protein | - |
| SaO55_RS01555 () | 327469..329916 | + | 2448 | WP_135789119.1 | virulence-associated E family protein | - |
| SaO55_RS01560 () | 330025..330123 | - | 99 | WP_001801650.1 | hypothetical protein | - |
| SaO55_RS01565 () | 330257..330547 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| SaO55_RS01570 () | 330528..331895 | + | 1368 | WP_135789120.1 | DEAD/DEAH box helicase | - |
| SaO55_RS01575 () | 331908..332345 | + | 438 | WP_065316441.1 | transcriptional regulator | - |
| SaO55_RS01580 () | 332502..332816 | + | 315 | WP_000160694.1 | HNH endonuclease | - |
| SaO55_RS01585 () | 332943..333248 | + | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| SaO55_RS01590 () | 333238..334929 | + | 1692 | WP_135789121.1 | terminase large subunit | - |
| SaO55_RS01595 () | 334934..336172 | + | 1239 | WP_001100667.1 | phage portal protein | - |
| SaO55_RS01600 () | 336156..336929 | + | 774 | WP_000061859.1 | Clp protease ClpP | - |
| SaO55_RS01605 () | 336941..338104 | + | 1164 | WP_118848044.1 | phage major capsid protein | - |
| SaO55_RS01610 () | 338173..338451 | + | 279 | WP_000050976.1 | head-tail connector protein | - |
| SaO55_RS01615 () | 338463..338795 | + | 333 | WP_118848045.1 | hypothetical protein | - |
| SaO55_RS01620 () | 338792..339193 | + | 402 | WP_000110017.1 | hypothetical protein | - |
| SaO55_RS01625 () | 339194..339589 | + | 396 | WP_031838002.1 | DUF3168 domain-containing protein | - |
| SaO55_RS01630 () | 339624..340265 | + | 642 | WP_000807534.1 | tail protein | - |
| SaO55_RS01635 () | 340357..340812 | + | 456 | WP_031795412.1 | Ig domain-containing protein | - |
| SaO55_RS01640 () | 340870..341220 | + | 351 | WP_135789122.1 | hypothetical protein | - |
| SaO55_RS01645 () | 341262..341420 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| SaO55_RS01650 () | 341434..347634 | + | 6201 | WP_135789123.1 | phage tail tape measure protein | - |
| SaO55_RS01655 () | 347634..348458 | + | 825 | WP_001190535.1 | phage tail family protein | - |
| SaO55_RS01660 () | 348467..350050 | + | 1584 | WP_135789124.1 | prophage endopeptidase tail family protein | - |
| SaO55_RS01665 () | 350050..350340 | + | 291 | WP_000179860.1 | hypothetical protein | - |
| SaO55_RS01670 () | 350356..352266 | + | 1911 | WP_000429563.1 | hypothetical protein | - |
| SaO55_RS01675 () | 352266..353732 | + | 1467 | WP_000067157.1 | BppU family phage baseplate upper protein | - |
| SaO55_RS01680 () | 353732..354121 | + | 390 | WP_001166604.1 | DUF2977 domain-containing protein | - |
| SaO55_RS01685 () | 354114..354278 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| SaO55_RS01690 () | 354324..354623 | + | 300 | WP_000466773.1 | DUF2951 family protein | - |
| SaO55_RS14505 () | 354775..354964 | + | 190 | Protein_321 | putative holin-like toxin | - |
| - () | 354956..355092 | - | 137 | NuclAT_0 | - | Antitoxin Detail |
| - () | 354956..355092 | - | 137 | NuclAT_0 | - | Antitoxin Detail |
| - () | 354956..355092 | - | 137 | NuclAT_0 | - | Antitoxin Detail |
| - () | 354956..355092 | - | 137 | NuclAT_0 | - | Antitoxin Detail |
| SaO55_RS01700 () | 355011..355121 | - | 111 | WP_070003492.1 | hypothetical protein | - |
| SaO55_RS01705 () | 355172..355474 | + | 303 | WP_000448764.1 | phage holin | Toxin Detail |
| SaO55_RS01710 () | 355486..356940 | + | 1455 | WP_000930277.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SaO55_RS01720 () | 358454..358951 | + | 498 | WP_001803960.1 | hypothetical protein | - |
| SaO55_RS01730 () | 359511..360338 | - | 828 | WP_000136028.1 | alpha/beta hydrolase | - |
| SaO55_RS01735 () | 360411..361610 | - | 1200 | WP_044122812.1 | NADH-dependent flavin oxidoreductase | - |
| SaO55_RS01740 () | 361706..361804 | + | 99 | WP_014532562.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|