MGE detailed information
MGE type: Prophage MGE length: 56997 bp
Accession: NZ_CP038021 Location: 1545080..1602076 Organism: Staphylococcus aureus strain 04-002 Replicon: chromosome
Accession: NZ_CP038021 Location: 1545080..1602076 Organism: Staphylococcus aureus strain 04-002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3I93_RS07550 () | 1540513..1541466 | - | 954 | WP_001163814.1 | helix-turn-helix domain-containing protein | - |
| E3I93_RS07555 () | 1541574..1541822 | + | 249 | WP_001151997.1 | ferredoxin | - |
| E3I93_RS07560 () | 1541928..1542473 | - | 546 | WP_001186908.1 | ECF transporter S component | - |
| E3I93_RS07565 () | 1542752..1542916 | - | 165 | WP_001799520.1 | hypothetical protein | - |
| E3I93_RS07570 () | 1543121..1544027 | - | 907 | Protein_1421 | DUF1672 domain-containing protein | - |
| E3I93_RS07575 () | 1544085..1544990 | - | 906 | WP_000913238.1 | DUF1672 domain-containing protein | - |
| E3I93_RS07580 () | 1545080..1545295 | - | 216 | WP_000209712.1 | hypothetical protein | - |
| E3I93_RS07595 () | 1546017..1547471 | - | 1455 | WP_000909205.1 | N-acetylmuramoyl-L-alanine amidase | - |
| E3I93_RS07600 () | 1547482..1547784 | - | 303 | WP_000339141.1 | phage holin | - |
| E3I93_RS07605 () | 1547920..1548219 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| E3I93_RS07610 () | 1548265..1548429 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| E3I93_RS07615 () | 1548422..1548811 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| E3I93_RS07620 () | 1548811..1550277 | - | 1467 | WP_000067132.1 | BppU family phage baseplate upper protein | - |
| E3I93_RS07625 () | 1550277..1552187 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| E3I93_RS07630 () | 1552203..1552493 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| E3I93_RS07635 () | 1552493..1554076 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| E3I93_RS07640 () | 1554085..1554909 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| E3I93_RS07645 () | 1554909..1561108 | - | 6200 | Protein_1434 | phage tail tape measure protein | - |
| E3I93_RS07650 () | 1561122..1561280 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| E3I93_RS07655 () | 1561322..1561672 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| E3I93_RS07660 () | 1561730..1562185 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| E3I93_RS07665 () | 1562277..1562918 | - | 642 | WP_000807536.1 | tail protein | - |
| E3I93_RS07670 () | 1562953..1563348 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| E3I93_RS07675 () | 1563349..1563750 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| E3I93_RS07680 () | 1563747..1564079 | - | 333 | WP_000395502.1 | hypothetical protein | - |
| E3I93_RS07685 () | 1564091..1564369 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| E3I93_RS07690 () | 1564438..1565601 | - | 1164 | WP_047211418.1 | phage major capsid protein | - |
| E3I93_RS07695 () | 1565613..1566386 | - | 774 | WP_064277996.1 | Clp protease ClpP | - |
| E3I93_RS07700 () | 1566370..1567607 | - | 1238 | Protein_1445 | phage portal protein | - |
| E3I93_RS07705 () | 1567612..1569303 | - | 1692 | WP_000153547.1 | terminase large subunit | - |
| E3I93_RS07710 () | 1569293..1569598 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| E3I93_RS07715 () | 1569724..1570038 | - | 315 | WP_000160687.1 | HNH endonuclease | - |
| E3I93_RS07720 () | 1570195..1570632 | - | 438 | WP_000528514.1 | transcriptional regulator | - |
| E3I93_RS07725 () | 1570645..1572012 | - | 1368 | WP_001825320.1 | DEAD/DEAH box helicase | - |
| E3I93_RS07730 () | 1571993..1572283 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| E3I93_RS07735 () | 1572417..1572521 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| E3I93_RS07740 () | 1572636..1575071 | - | 2436 | WP_134521533.1 | virulence-associated E family protein | - |
| E3I93_RS07745 () | 1575123..1575323 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| E3I93_RS07750 () | 1575391..1575543 | - | 153 | WP_031875401.1 | transcriptional regulator | - |
| E3I93_RS07755 () | 1575536..1575772 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| E3I93_RS07760 () | 1575797..1576033 | - | 237 | WP_000195806.1 | DUF1381 domain-containing protein | - |
| E3I93_RS07765 () | 1576070..1576605 | - | 536 | Protein_1458 | dUTPase | - |
| E3I93_RS07770 () | 1576598..1576780 | - | 183 | WP_000028425.1 | hypothetical protein | Antitoxin Detail |
| E3I93_RS07775 () | 1576770..1577021 | - | 252 | WP_001065110.1 | DUF1024 family protein | Toxin Detail |
| E3I93_RS07780 () | 1577036..1577291 | - | 256 | Protein_1461 | hypothetical protein | - |
| E3I93_RS07785 () | 1577306..1577506 | - | 201 | WP_000235324.1 | hypothetical protein | - |
| E3I93_RS07790 () | 1577509..1577766 | - | 258 | WP_000022730.1 | DUF3310 domain-containing protein | - |
| E3I93_RS07795 () | 1577766..1578167 | - | 402 | WP_000113974.1 | PVL family protein | - |
| E3I93_RS07800 () | 1578167..1578352 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| E3I93_RS07805 () | 1578365..1580317 | - | 1953 | WP_001802096.1 | DNA polymerase | - |
| E3I93_RS07810 () | 1580385..1580942 | - | 558 | WP_000645048.1 | DUF2815 family protein | - |
| E3I93_RS07815 () | 1580968..1582134 | - | 1167 | WP_134521535.1 | DUF2800 domain-containing protein | - |
| E3I93_RS07820 () | 1582131..1582493 | - | 363 | WP_000279452.1 | hypothetical protein | - |
| E3I93_RS07825 () | 1582508..1582831 | - | 324 | WP_000174996.1 | hypothetical protein | - |
| E3I93_RS07830 () | 1582911..1583072 | - | 162 | WP_001285961.1 | DUF1270 domain-containing protein | - |
| E3I93_RS07835 () | 1583085..1583348 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| E3I93_RS07840 () | 1583373..1583588 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| E3I93_RS07845 () | 1583643..1584008 | + | 366 | WP_134521537.1 | hypothetical protein | - |
| E3I93_RS07850 () | 1583977..1584222 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| E3I93_RS07855 () | 1584289..1584669 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| E3I93_RS07865 () | 1584922..1585134 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| E3I93_RS14830 () | 1585175..1585324 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| E3I93_RS07870 () | 1585339..1585782 | - | 444 | WP_000435357.1 | hypothetical protein | - |
| E3I93_RS07875 () | 1585830..1586042 | - | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
| E3I93_RS07880 () | 1586194..1586925 | + | 732 | WP_000511090.1 | XRE family transcriptional regulator | - |
| E3I93_RS07885 () | 1586996..1587178 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| E3I93_RS07890 () | 1587215..1587361 | + | 147 | WP_072403847.1 | hypothetical protein | - |
| E3I93_RS07895 () | 1587358..1587972 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| E3I93_RS07900 () | 1588098..1589301 | + | 1204 | Protein_1485 | Tyrosine recombinase XerC ; Integrase | Integrase |
| E3I93_RS07905 () | 1589344..1591386 | - | 2043 | WP_106898740.1 | hypothetical protein | - |
| E3I93_RS07910 () | 1591373..1592305 | - | 933 | WP_001574168.1 | DUF1672 domain-containing protein | - |
| E3I93_RS07915 () | 1592557..1594308 | - | 1752 | WP_000987777.1 | two-component system sensor histidine kinase SrrB | - |
| E3I93_RS07920 () | 1594289..1595014 | - | 726 | WP_000064078.1 | Regulator of RpoS | VF |
| E3I93_RS07925 () | 1595147..1595884 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| E3I93_RS07930 () | 1595877..1596419 | - | 543 | WP_000368652.1 | SMC-Scp complex subunit ScpB | - |
| E3I93_RS07935 () | 1596412..1597143 | - | 732 | WP_000273367.1 | segregation/condensation protein A | - |
| E3I93_RS07940 () | 1597235..1597741 | + | 507 | WP_001183424.1 | DUF309 domain-containing protein | - |
| E3I93_RS07945 () | 1597819..1598706 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E3I93_RS07950 () | 1598755..1599204 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| E3I93_RS07955 () | 1599309..1599851 | - | 543 | WP_134521539.1 | NUDIX hydrolase | - |
| E3I93_RS07960 () | 1599933..1600841 | + | 909 | WP_001171333.1 | aldo/keto reductase | - |
| E3I93_RS07965 () | 1601057..1601305 | - | 249 | WP_000995806.1 | hypothetical protein | - |
| E3I93_RS07970 () | 1601321..1602076 | - | 756 | WP_000678227.1 | SDR family oxidoreductase | - |
| E3I93_RS07975 () | 1602218..1603033 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| E3I93_RS07980 () | 1603138..1604058 | - | 921 | WP_000454059.1 | ribonuclease Z | - |
| E3I93_RS07985 () | 1604371..1605855 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| E3I93_RS07990 () | 1606085..1606951 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|