MGE detailed information
MGE type: Prophage MGE length: 11385 bp
Accession: NZ_CP037996 Location: 2946716..2958100 Organism: Shigella flexneri strain FC906 Replicon: chromosome
Accession: NZ_CP037996 Location: 2946716..2958100 Organism: Shigella flexneri strain FC906 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBL25_RS14980 (2942252) | 2942252..2942419 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| CBL25_RS14985 (2942823) | 2942823..2943584 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| CBL25_RS14990 (2943652) | 2943652..2943855 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| CBL25_RS14995 (2944103) | 2944103..2946382 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| CBL25_RS15000 (2946716) | 2946716..2947465 | - | 750 | Protein_2877 | hypothetical protein | VF |
| CBL25_RS15005 (2947521) | 2947521..2948218 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| CBL25_RS15010 (2948236) | 2948236..2949112 | + | 877 | Protein_2879 | IS3 family transposase | - |
| CBL25_RS15015 (2949137) | 2949137..2949316 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| CBL25_RS23995 (2949466) | 2949466..2949627 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| CBL25_RS15020 (2949627) | 2949627..2949812 | - | 186 | Protein_2882 | DUF1737 domain-containing protein | - |
| CBL25_RS15025 (2950072) | 2950072..2950407 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| CBL25_RS15030 (2950688) | 2950688..2950796 | - | 109 | Protein_2884 | DUF3927 family protein | - |
| CBL25_RS15050 (2951717) | 2951717..2952538 | - | 822 | WP_000762882.1 | antitermination protein | - |
| CBL25_RS15055 (2952553) | 2952553..2952909 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CBL25_RS15060 (2952922) | 2952922..2953971 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| CBL25_RS15065 (2953973) | 2953973..2954251 | - | 279 | Protein_2888 | hypothetical protein | - |
| CBL25_RS15070 (2954318) | 2954318..2954569 | - | 252 | WP_000980987.1 | protein Rem | - |
| CBL25_RS15075 (2954787) | 2954787..2954942 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CBL25_RS15080 (2955014) | 2955014..2955301 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CBL25_RS15085 (2955301) | 2955301..2955540 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CBL25_RS15090 (2955565) | 2955565..2955870 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| CBL25_RS15095 (2955867) | 2955867..2957019 | - | 1153 | Protein_2894 | IS3 family transposase IS600 | Transposase |
| CBL25_RS15100 (2957081) | 2957081..2958100 | + | 1020 | Protein_2895 | MHS family MFS transporter YdfJ | - |
| CBL25_RS15105 (2958189) | 2958189..2959649 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| CBL25_RS15110 (2959685) | 2959685..2959888 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CBL25_RS15115 (2960065) | 2960065..2960751 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| CBL25_RS15120 (2960840) | 2960840..2961586 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Prophage | TA120372 | NZ_CP037923 | 1629251..1643278 | 0.009 |