MGE detailed information
MGE type: Prophage MGE length: 70322 bp
Accession: NZ_CP037943 Location: 921297..991618 Organism: Escherichia coli strain CFSAN027343 Replicon: chromosome
Accession: NZ_CP037943 Location: 921297..991618 Organism: Escherichia coli strain CFSAN027343 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKI57_RS05075 () | 917153..917953 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| EKI57_RS05080 () | 917966..918817 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| EKI57_RS05085 () | 918872..919330 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| EKI57_RS05090 () | 919759..920325 | + | 567 | WP_133394879.1 | manganese efflux pump MntP | - |
| EKI57_RS05095 () | 920322..921131 | - | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| EKI57_RS05100 () | 921297..921506 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| EKI57_RS05105 () | 921519..921662 | - | 144 | WP_001295496.1 | YobF family protein | - |
| EKI57_RS05110 () | 922331..922618 | - | 288 | WP_001006866.1 | YebO family protein | - |
| EKI57_RS05115 () | 922693..922836 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| EKI57_RS05120 () | 922995..923234 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| EKI57_RS05125 () | 923377..924168 | - | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| EKI57_RS05130 () | 924345..925718 | + | 1374 | WP_001127210.1 | MFS transporter | - |
| EKI57_RS05135 () | 925764..926645 | - | 882 | WP_000984517.1 | protease HtpX | - |
| EKI57_RS05140 () | 926837..928885 | - | 2049 | WP_001427396.1 | carboxy terminal-processing peptidase | - |
| EKI57_RS05145 () | 928905..929603 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| EKI57_RS05150 () | 929700..930197 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| EKI57_RS05155 () | 930327..931610 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| EKI57_RS05160 () | 931579..934212 | + | 2634 | WP_001299674.1 | hypothetical protein | VF |
| EKI57_RS05165 () | 934292..935731 | + | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EKI57_RS05170 () | 935849..936085 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| EKI57_RS05175 () | 936190..936381 | + | 192 | WP_001296140.1 | YebW family protein | - |
| EKI57_RS05180 () | 936382..937038 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| EKI57_RS05185 () | 937723..937989 | + | 267 | Protein_1000 | hypothetical protein | - |
| EKI57_RS05190 () | 937993..938643 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| EKI57_RS05200 () | 938868..939743 | - | 876 | WP_000491545.1 | hypothetical protein | VF |
| EKI57_RS05205 () | 939884..940153 | - | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| EKI57_RS05210 () | 940155..941468 | - | 1314 | WP_133394880.1 | ISNCY family transposase KIS | Transposase |
| EKI57_RS05215 () | 941533..942132 | - | 600 | WP_001230428.1 | hypothetical protein | VF |
| EKI57_RS05220 () | 942200..945592 | - | 3393 | WP_106907854.1 | host specificity protein J | - |
| EKI57_RS05225 () | 945839..946471 | - | 633 | WP_072141513.1 | tail assembly protein | - |
| EKI57_RS05230 () | 946417..947160 | - | 744 | WP_061330346.1 | C40 family peptidase | - |
| EKI57_RS05235 () | 947166..947864 | - | 699 | WP_001448322.1 | phage minor tail protein L | - |
| EKI57_RS05240 () | 947864..948193 | - | 330 | WP_000847298.1 | phage tail protein | - |
| EKI57_RS05245 () | 948190..950802 | - | 2613 | WP_000081788.1 | phage tail tape measure protein | - |
| EKI57_RS05250 () | 950783..951196 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| EKI57_RS05255 () | 951223..951645 | - | 423 | WP_133394852.1 | phage minor tail protein G | - |
| EKI57_RS05260 () | 951659..952411 | - | 753 | WP_000235101.1 | Ig domain-containing protein | - |
| EKI57_RS05265 () | 952419..952814 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| EKI57_RS05270 () | 952811..953389 | - | 579 | WP_000975099.1 | phage tail protein | - |
| EKI57_RS05275 () | 953401..953754 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| EKI57_RS05280 () | 953766..954161 | - | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| EKI57_RS05285 () | 954203..955228 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| EKI57_RS05290 () | 955284..955616 | - | 333 | WP_001295978.1 | head decoration protein | - |
| EKI57_RS05295 () | 955626..956945 | - | 1320 | WP_000123292.1 | S49 family peptidase | - |
| EKI57_RS05300 () | 956926..958527 | - | 1602 | WP_001443752.1 | phage portal protein | - |
| EKI57_RS05305 () | 958524..958730 | - | 207 | WP_000198153.1 | gpW family protein | - |
| EKI57_RS05310 () | 958727..960652 | - | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| EKI57_RS05315 () | 960627..961172 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| EKI57_RS05320 () | 961561..961755 | + | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| EKI57_RS05325 () | 961943..962560 | - | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| EKI57_RS05330 () | 962710..963147 | - | 438 | WP_000092325.1 | lysis protein | - |
| EKI57_RS05335 () | 963144..963641 | - | 498 | WP_000075132.1 | lysozyme RrrD | - |
| EKI57_RS05340 () | 963641..963856 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| EKI57_RS05345 () | 964295..966145 | - | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| EKI57_RS05350 () | 966467..966719 | - | 253 | Protein_1032 | DUF3927 family protein | - |
| EKI57_RS05355 () | 966716..967078 | - | 363 | Protein_1033 | tellurite resistance TerB family protein | - |
| EKI57_RS05360 () | 967316..968137 | - | 822 | WP_000762928.1 | antitermination protein | - |
| EKI57_RS05365 () | 968134..968508 | - | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EKI57_RS05370 () | 968521..969570 | - | 1050 | WP_032284663.1 | DUF968 domain-containing protein | - |
| EKI57_RS05375 () | 969572..969844 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| EKI57_RS05380 () | 969966..970310 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| EKI57_RS05385 () | 970430..970585 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| EKI57_RS05390 () | 970876..971433 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| EKI57_RS05395 () | 971435..971653 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| EKI57_RS05400 () | 971781..972092 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| EKI57_RS05405 () | 972085..972312 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| EKI57_RS05410 () | 972309..972590 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| EKI57_RS05415 () | 972623..973385 | - | 763 | Protein_1045 | DUF1627 domain-containing protein | - |
| EKI57_RS05420 () | 973411..974152 | - | 742 | Protein_1046 | ATP-binding protein | - |
| EKI57_RS05425 () | 974159..975121 | - | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| EKI57_RS05430 () | 975144..975569 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| EKI57_RS05435 () | 975566..975868 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| EKI57_RS05440 () | 975966..976337 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| EKI57_RS05445 () | 976358..976549 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| EKI57_RS05450 () | 976551..976829 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EKI57_RS05455 () | 977116..977268 | + | 153 | WP_001427316.1 | DUF1391 family protein | - |
| EKI57_RS05460 () | 977689..977910 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| EKI57_RS05465 () | 977904..978080 | + | 177 | WP_000245534.1 | hypothetical protein | - |
| EKI57_RS05470 () | 978154..978429 | + | 276 | WP_001307773.1 | hypothetical protein | - |
| EKI57_RS05475 () | 978528..981179 | + | 2652 | WP_133394881.1 | exodeoxyribonuclease VIII | - |
| EKI57_RS05480 () | 981172..981981 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| EKI57_RS05485 () | 982038..982232 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| EKI57_RS05490 () | 982225..982413 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 982231..982409 | - | 179 | NuclAT_1 | - | - |
| - () | 982231..982409 | - | 179 | NuclAT_1 | - | - |
| - () | 982231..982409 | - | 179 | NuclAT_1 | - | - |
| - () | 982231..982409 | - | 179 | NuclAT_1 | - | - |
| EKI57_RS05495 () | 982520..982801 | + | 282 | WP_001443927.1 | excisionase | - |
| EKI57_RS05500 () | 982767..983843 | + | 1077 | WP_133394882.1 | hypothetical protein ; Integrase | Integrase |
| - () | 983974..984208 | + | 235 | - | - | Antitoxin Detail |
| - () | 983975..984078 | - | 104 | - | - | Toxin Detail |
| EKI57_RS05505 () | 984236..984577 | - | 342 | WP_000976492.1 | YebY family protein | - |
| EKI57_RS05510 () | 984590..985462 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| EKI57_RS05515 () | 985466..985840 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| EKI57_RS05520 () | 985979..986209 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| EKI57_RS05525 () | 986311..986967 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| EKI57_RS05530 () | 986991..987653 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| EKI57_RS05535 () | 987650..989710 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| EKI57_RS05540 () | 989919..990578 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| EKI57_RS05545 () | 990905..991261 | - | 357 | WP_001295500.1 | protein YebF | - |
| EKI57_RS05550 () | 991328..991618 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| EKI57_RS05555 () | 991752..992930 | + | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EKI57_RS05560 () | 992986..993627 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EKI57_RS05565 () | 993664..995475 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|