MGE detailed information
MGE type: IScluster/Tn MGE length: 12126 bp
Accession: NZ_CP037942 Location: 28778..40903 Organism: Escherichia coli strain CFSAN027350 Replicon: plasmid pCFSAN027350
Accession: NZ_CP037942 Location: 28778..40903 Organism: Escherichia coli strain CFSAN027350 Replicon: plasmid pCFSAN027350
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKI55_RS27865 () | 24593..25798 | - | 1206 | WP_000817635.1 | AAA family ATPase | - |
| EKI55_RS27875 () | 26514..26765 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| EKI55_RS27880 () | 26762..27049 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EKI55_RS27885 () | 27048..27296 | + | 249 | Protein_25 | integrase core domain-containing protein | - |
| EKI55_RS27895 () | 27976..28694 | + | 719 | Protein_26 | RepB family plasmid replication initiator protein | - |
| EKI55_RS27900 () | 28778..29428 | + | 651 | WP_000993931.1 | IS66 family transposase IS679 | Transposase |
| EKI55_RS27905 () | 29428..29775 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| EKI55_RS27910 () | 29795..31366 | + | 1572 | WP_000381416.1 | IS66 family transposase IS679 | Transposase |
| EKI55_RS27915 () | 31395..31664 | + | 270 | Protein_30 | protein RepA | - |
| EKI55_RS27920 () | 31814..33352 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27925 () | 33402..33749 | - | 348 | WP_001583081.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27930 () | 33746..34126 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| EKI55_RS27935 () | 34417..34575 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 34619..34843 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34619..34843 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34619..34843 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34619..34843 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| EKI55_RS28940 () | 34655..34843 | + | 189 | WP_001336239.1 | hypothetical protein | - |
| EKI55_RS27940 () | 34855..35574 | - | 720 | WP_032345718.1 | plasmid SOS inhibition protein A | - |
| EKI55_RS27945 () | 35571..36005 | - | 435 | WP_032345719.1 | conjugation system SOS inhibitor PsiB | - |
| EKI55_RS27950 () | 36060..37878 | - | 1819 | Protein_38 | ParB/RepB/Spo0J family partition protein | - |
| EKI55_RS27955 () | 37817..38143 | + | 327 | WP_032345720.1 | hypothetical protein | - |
| EKI55_RS27960 () | 38243..38443 | + | 201 | Protein_40 | IS3 family transposase IS1203 | Transposase |
| EKI55_RS27970 () | 39700..40137 | + | 438 | Protein_42 | IS3 family transposase ISSfl10 | Transposase |
| EKI55_RS27975 () | 40180..40380 | - | 201 | Protein_43 | IS3 family transposase IS1203 | Transposase |
| EKI55_RS27980 () | 40435..40629 | + | 195 | Protein_44 | IS21 family transposase IS21 | Transposase |
| EKI55_RS27985 () | 40697..40921 | - | 225 | Protein_45 | IS3 family transposase IS3H | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|