MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33301 bp
Accession: NZ_CP037906 Location: 1..33301 Organism: Escherichia coli strain LHM10-1 Replicon: plasmid pLHM10-1-MCR-1
Accession: NZ_CP037906 Location: 1..33301 Organism: Escherichia coli strain LHM10-1 Replicon: plasmid pLHM10-1-MCR-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1J55_RS24575 () | 910..1614 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E1J55_RS24580 () | 1701..2165 | - | 465 | WP_001293134.1 | H-NS histone family protein | - |
| E1J55_RS24585 () | 2183..2389 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| E1J55_RS24590 () | 2386..4539 | - | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| E1J55_RS24595 () | 4544..5116 | - | 573 | WP_001198960.1 | hypothetical protein | - |
| E1J55_RS25420 () | 5120..5266 | - | 147 | WP_000382583.1 | hypothetical protein | - |
| E1J55_RS24600 () | 5427..5732 | - | 306 | WP_001350475.1 | putative conjugal transfer protein | - |
| E1J55_RS24605 () | 5716..6135 | - | 420 | WP_000737411.1 | hypothetical protein | - |
| E1J55_RS24610 () | 6147..8009 | - | 1863 | WP_170324155.1 | type IV secretory system conjugative DNA transfer family protein | - |
| E1J55_RS24615 () | 7996..9024 | - | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| E1J55_RS24620 () | 9026..10144 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| E1J55_RS24625 () | 10137..11045 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| E1J55_RS24630 () | 11042..11728 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| E1J55_RS24650 () | 12243..13337 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| E1J55_RS24655 () | 13349..14065 | - | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| E1J55_RS24660 () | 14077..16824 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| E1J55_RS24665 () | 16843..17115 | - | 273 | WP_001328551.1 | Type IV secretion system protein virB2 | VF |
| E1J55_RS24670 () | 17183..17803 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| E1J55_RS24675 () | 18159..18374 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| E1J55_RS24680 () | 18371..18664 | - | 294 | WP_060598542.1 | LuxR family transcriptional regulator | - |
| E1J55_RS24685 () | 18741..19970 | - | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| E1J55_RS24690 () | 19974..20477 | - | 504 | WP_000781813.1 | hypothetical protein | - |
| E1J55_RS24700 () | 20838..21185 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| E1J55_RS24705 () | 21182..21430 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| E1J55_RS24710 () | 21735..22085 | - | 351 | WP_000854259.1 | hypothetical protein | - |
| E1J55_RS24715 () | 22176..22475 | - | 300 | WP_000650309.1 | hypothetical protein | - |
| E1J55_RS24725 () | 22929..23156 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| E1J55_RS24730 () | 23143..23394 | - | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| E1J55_RS24735 () | 23391..23933 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| E1J55_RS24740 () | 24038..24553 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| E1J55_RS24750 () | 25968..26834 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| E1J55_RS24755 () | 26847..27251 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| E1J55_RS24760 () | 27386..27913 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| E1J55_RS24765 () | 28065..29018 | - | 954 | WP_158302283.1 | PAP2 family protein | - |
| E1J55_RS24770 () | 29090..30715 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| E1J55_RS24775 () | 30895..31518 | - | 624 | Protein_35 | DUF2806 domain-containing protein | - |
| E1J55_RS24785 () | 31679..31948 | - | 270 | WP_001086090.1 | hypothetical protein | - |
| E1J55_RS24790 () | 32023..32670 | - | 648 | WP_000587671.1 | P-loop NTPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|