MGE detailed information
MGE type: Conjugative plasmid MGE length: 109593 bp
Accession: NZ_CP036180 Location: 1..109593 Organism: Escherichia coli strain WCHEC025970 Replicon: plasmid p1_025970
Accession: NZ_CP036180 Location: 1..109593 Organism: Escherichia coli strain WCHEC025970 Replicon: plasmid p1_025970
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EYD11_RS26810 () | 1..858 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| EYD11_RS26815 () | 1559..1699 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| EYD11_RS24905 () | 1797..2450 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| EYD11_RS24910 () | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| EYD11_RS24915 () | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| EYD11_RS24920 () | 3383..3798 | + | 416 | Protein_6 | IS1 family transposase | - |
| EYD11_RS24925 () | 3834..4379 | - | 546 | Protein_7 | Tn3 family transposase TnpA_Tn3 | Transposase |
| EYD11_RS24930 () | 4445..5149 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EYD11_RS24935 () | 5396..5869 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| EYD11_RS24940 () | 6025..7029 | + | 1005 | Protein_10 | IS91 family transposase ISAzo26 | Transposase |
| EYD11_RS26665 () | 7083..7175 | - | 93 | Protein_11 | IS91 family transposase ISAzo26 | Transposase |
| EYD11_RS24950 () | 7341..8540 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| EYD11_RS24955 () | 8550..8738 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| EYD11_RS26670 () | 8968..9072 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| EYD11_RS24960 () | 9201..9458 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| EYD11_RS24965 () | 9516..10292 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| EYD11_RS24970 () | 10289..11032 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| EYD11_RS24975 () | 11083..11433 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| EYD11_RS24985 () | 11985..13073 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| EYD11_RS24990 () | 13075..15300 | + | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| EYD11_RS24995 () | 15350..16249 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| EYD11_RS25000 () | 16239..16529 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| EYD11_RS25010 () | 16825..17055 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EYD11_RS25015 () | 17052..17468 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EYD11_RS25020 () | 17630..19768 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| EYD11_RS25025 () | 20122..20379 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| EYD11_RS25030 () | 20379..20969 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| EYD11_RS25035 () | 21232..22788 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| EYD11_RS25040 () | 22980..23597 | + | 618 | WP_000521603.1 | hypothetical protein | - |
| EYD11_RS25045 () | 23890..24927 | - | 1038 | WP_044502555.1 | permease | - |
| EYD11_RS25050 () | 25032..25355 | + | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| EYD11_RS25055 () | 25554..26258 | + | 705 | WP_102204227.1 | IS6 family transposase IS15DI | Transposase |
| EYD11_RS25060 () | 26288..26992 | + | 705 | WP_032193599.1 | replication initiation protein | - |
| EYD11_RS25075 () | 28603..29199 | - | 597 | WP_000583524.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| EYD11_RS25085 () | 29256..29960 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EYD11_RS25090 () | 30232..30912 | + | 681 | Protein_36 | IS91 family transposase ISAzo26 | Transposase |
| EYD11_RS25095 () | 30977..31681 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EYD11_RS25105 () | 31733..33499 | + | 1767 | Protein_38 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| EYD11_RS25110 () | 33578..34582 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| EYD11_RS25115 () | 34764..34940 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| EYD11_RS25125 () | 35270..36085 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| EYD11_RS25130 () | 36146..36949 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| EYD11_RS25135 () | 36949..37785 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| EYD11_RS25145 () | 38091..38333 | + | 243 | WP_000844627.1 | transposase | - |
| EYD11_RS25150 () | 38365..39015 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| EYD11_RS25155 () | 39121..40320 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| EYD11_RS25160 () | 40287..40475 | - | 189 | Protein_47 | IS91 family transposase | - |
| EYD11_RS25165 () | 40587..40892 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| EYD11_RS25170 () | 40920..42134 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| EYD11_RS26820 () | 42351..42797 | - | 447 | Protein_50 | DUF3363 domain-containing protein | - |
| EYD11_RS25180 () | 43266..44759 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| EYD11_RS25185 () | 44970..45194 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| EYD11_RS25190 () | 45191..45928 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| EYD11_RS26675 () | 46414..46554 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| EYD11_RS25200 () | 46560..47264 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EYD11_RS25205 () | 47319..47519 | + | 201 | Protein_56 | DDE-type integrase/transposase/recombinase | - |
| EYD11_RS25210 () | 47824..48381 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EYD11_RS25215 () | 48564..49424 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| EYD11_RS25220 () | 49594..50349 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| EYD11_RS25225 () | 50475..51179 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EYD11_RS25230 () | 51234..51752 | - | 519 | Protein_61 | IS6 family transposase IS15DII | Transposase |
| EYD11_RS25235 () | 52024..52728 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| EYD11_RS26825 () | 52794..52859 | + | 66 | Protein_63 | IS1 family transposase | - |
| EYD11_RS25255 () | 54308..54542 | + | 235 | Protein_64 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EYD11_RS25260 () | 54670..54951 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| EYD11_RS25265 () | 55074..55424 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| EYD11_RS25270 () | 55427..56389 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| EYD11_RS25275 () | 56536..56829 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| EYD11_RS25285 () | 56906..57589 | + | 684 | WP_000085883.1 | DNA methylase | - |
| EYD11_RS25290 () | 57590..57811 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| EYD11_RS25295 () | 57825..58259 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| EYD11_RS26830 () | 58310..59086 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| EYD11_RS25310 () | 59627..59929 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| EYD11_RS25315 () | 59976..60398 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| EYD11_RS25320 () | 60395..60586 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| EYD11_RS25330 () | 61624..61854 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| EYD11_RS25335 () | 61906..63267 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| EYD11_RS25340 () | 63314..63877 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| EYD11_RS25365 () | 64720..65247 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| EYD11_RS25370 () | 65305..65538 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| EYD11_RS25375 () | 65599..67622 | + | 2024 | Protein_81 | ParB/RepB/Spo0J family partition protein | - |
| EYD11_RS25380 () | 67691..68125 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| EYD11_RS25385 () | 68122..68841 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 68853..69077 | + | 225 | NuclAT_0 | - | - |
| - () | 68853..69077 | + | 225 | NuclAT_0 | - | - |
| - () | 68853..69077 | + | 225 | NuclAT_0 | - | - |
| - () | 68853..69077 | + | 225 | NuclAT_0 | - | - |
| EYD11_RS26680 () | 68862..69041 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| EYD11_RS25390 () | 69121..69279 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| EYD11_RS26835 () | 69517..69894 | - | 378 | Protein_86 | hypothetical protein | - |
| EYD11_RS25410 () | 70194..70490 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| EYD11_RS25415 () | 70601..71422 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| EYD11_RS25420 () | 71719..72366 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| EYD11_RS25425 () | 72643..73026 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| EYD11_RS25430 () | 73217..73903 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| EYD11_RS25435 () | 73997..74224 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| EYD11_RS25440 () | 74258..74623 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| EYD11_RS25445 () | 74638..74949 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| EYD11_RS25450 () | 74971..75537 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| EYD11_RS25455 () | 75548..76252 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| EYD11_RS25460 () | 76252..77679 | + | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| EYD11_RS25465 () | 77669..78259 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| EYD11_RS25470 () | 78213..78443 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| EYD11_RS25475 () | 78455..78706 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| EYD11_RS25480 () | 78703..79218 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EYD11_RS25485 () | 79353..79574 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| EYD11_RS25490 () | 79734..82361 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| EYD11_RS25495 () | 82358..82744 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| EYD11_RS25500 () | 82741..83373 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| EYD11_RS25505 () | 83370..84362 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| EYD11_RS25510 () | 84389..84697 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| EYD11_RS25515 () | 84760..85281 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| EYD11_RS25520 () | 85308..85946 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EYD11_RS25525 () | 85943..86314 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| EYD11_RS25530 () | 86340..86762 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| EYD11_RS25535 () | 86759..88609 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EYD11_RS25540 () | 88636..88893 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| EYD11_RS25545 () | 88886..89629 | + | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EYD11_RS25550 () | 89745..90026 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EYD11_RS25555 () | 90013..90558 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EYD11_RS25560 () | 90488..90862 | + | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| EYD11_RS25565 () | 90816..91208 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| EYD11_RS25570 () | 91195..92568 | + | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| EYD11_RS25575 () | 92565..95381 | + | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EYD11_RS25580 () | 95414..95935 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| EYD11_RS25585 () | 95960..96691 | + | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| EYD11_RS25590 () | 96894..97631 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| EYD11_RS25595 () | 97682..99934 | + | 2253 | WP_061093448.1 | type IV conjugative transfer system coupling protein TraD | - |
| EYD11_RS25600 () | 99934..105204 | + | 5271 | WP_061093447.1 | Multifunctional conjugation protein TraI | Relaxase |
| EYD11_RS25605 () | 105224..105970 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| EYD11_RS25610 () | 106025..106585 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| EYD11_RS25615 () | 106717..106917 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| EYD11_RS25620 () | 107303..107902 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| EYD11_RS25625 () | 108066..108296 | + | 231 | WP_001736714.1 | hypothetical protein | - |
| - () | 108497..108556 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 108497..108556 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 108497..108556 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 108497..108556 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| EYD11_RS25635 () | 108601..108750 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| EYD11_RS25640 () | 109034..109282 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|