MGE detailed information
MGE type: Conjugative plasmid MGE length: 71003 bp
Accession: NZ_CP035854 Location: 1..71003 Organism: Escherichia coli strain TW10590 Replicon: plasmid pTW10590_71
Accession: NZ_CP035854 Location: 1..71003 Organism: Escherichia coli strain TW10590 Replicon: plasmid pTW10590_71
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXE32_RS26105 (522) | 522..1298 | - | 777 | WP_001005040.1 | hypothetical protein | - |
| EXE32_RS26110 (1344) | 1344..1778 | - | 435 | WP_000274494.1 | DUF1380 family protein | - |
| EXE32_RS26115 (1792) | 1792..2013 | - | 222 | WP_001104880.1 | hypothetical protein | - |
| EXE32_RS26120 (2014) | 2014..2697 | - | 684 | WP_000086129.1 | DNA methylase | - |
| EXE32_RS26125 (2773) | 2773..3084 | - | 312 | WP_021018648.1 | hypothetical protein | - |
| EXE32_RS26130 (3081) | 3081..3983 | - | 903 | WP_077628965.1 | DUF1281 domain-containing protein | - |
| EXE32_RS26135 (4401) | 4401..4649 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| EXE32_RS26140 (4646) | 4646..5083 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EXE32_RS26145 (5083) | 5083..6354 | + | 1272 | WP_000457506.1 | Y-family DNA polymerase | - |
| EXE32_RS26150 (6534) | 6534..7160 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| EXE32_RS26155 (7157) | 7157..7459 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| EXE32_RS26160 (7978) | 7978..9324 | - | 1347 | WP_001132022.1 | protein YagA | - |
| EXE32_RS26165 (9678) | 9678..10280 | + | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| EXE32_RS26170 (10418) | 10418..10684 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| EXE32_RS26175 (10953) | 10953..11156 | - | 204 | Protein_15 | hypothetical protein | - |
| EXE32_RS26180 (11262) | 11262..11537 | - | 276 | WP_000421261.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EXE32_RS26185 (11537) | 11537..11821 | - | 285 | WP_001297026.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EXE32_RS26190 (12729) | 12729..13760 | - | 1032 | WP_000907882.1 | plasmid replication initiator RepA | - |
| EXE32_RS26195 (14463) | 14463..15104 | + | 642 | WP_000335851.1 | transcription termination/antitermination NusG family protein | - |
| EXE32_RS26200 (15245) | 15245..15910 | + | 666 | WP_000154140.1 | hypothetical protein | - |
| EXE32_RS26840 (16265) | 16265..16411 | + | 147 | WP_235777688.1 | PilI type IV pilus biogenesis protein | - |
| EXE32_RS26210 (16527) | 16527..16862 | + | 336 | WP_024168261.1 | hypothetical protein | - |
| EXE32_RS26215 (17089) | 17089..18159 | + | 1071 | WP_000730432.1 | hypothetical protein | VF |
| EXE32_RS26220 (18163) | 18163..18600 | + | 438 | WP_000539951.1 | hypothetical protein | VF |
| EXE32_RS26225 (18632) | 18632..20251 | + | 1620 | WP_001035559.1 | Outer membrane lipoprotein BfpB | VF |
| EXE32_RS26230 (20272) | 20272..21567 | + | 1296 | WP_000129884.1 | type 4b pilus protein PilO2 | - |
| EXE32_RS26235 (21557) | 21557..22015 | + | 459 | WP_000095887.1 | hypothetical protein | VF |
| EXE32_RS26240 (22118) | 22118..23626 | + | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| EXE32_RS26245 (23628) | 23628..24722 | + | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EXE32_RS26250 (24784) | 24784..25320 | + | 537 | WP_000111522.1 | hypothetical protein | VF |
| EXE32_RS26255 (25365) | 25365..25850 | + | 486 | WP_001080767.1 | hypothetical protein | VF |
| EXE32_RS26260 (25866) | 25866..26492 | + | 627 | WP_000939938.1 | prepilin peptidase | - |
| EXE32_RS26265 (26510) | 26510..27703 | + | 1194 | WP_001168170.1 | hypothetical protein | VF |
| EXE32_RS26270 (27760) | 27760..28023 | - | 264 | Protein_34 | transposase | - |
| EXE32_RS26275 (27961) | 27961..28113 | + | 153 | WP_001399803.1 | hypothetical protein | - |
| EXE32_RS26280 (28264) | 28264..29088 | + | 825 | WP_001238934.1 | conjugal transfer protein TraE | - |
| EXE32_RS26285 (29174) | 29174..30376 | + | 1203 | WP_000976355.1 | conjugal transfer protein TraF | - |
| EXE32_RS26290 (30436) | 30436..31020 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| EXE32_RS26295 (31415) | 31415..31873 | + | 459 | WP_001079806.1 | hypothetical protein | VF |
| EXE32_RS26300 (31870) | 31870..32688 | + | 819 | WP_000646093.1 | hypothetical protein | VF |
| EXE32_RS26305 (32685) | 32685..33833 | + | 1149 | WP_001024968.1 | putative protein YggR | VF |
| EXE32_RS26310 (33830) | 33830..34120 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| EXE32_RS26315 (34135) | 34135..34686 | + | 552 | WP_000014585.1 | Phospholipase D | VF |
| EXE32_RS26320 (34776) | 34776..38543 | + | 3768 | WP_001141524.1 | DUF5710 domain-containing protein | - |
| EXE32_RS26325 (38561) | 38561..38908 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| EXE32_RS26330 (38905) | 38905..39597 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| EXE32_RS26335 (39608) | 39608..40591 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| EXE32_RS26340 (40594) | 40594..41883 | + | 1290 | WP_001271993.1 | conjugal transfer protein TraO | - |
| EXE32_RS26345 (41883) | 41883..42587 | + | 705 | WP_001295718.1 | IncI1-type conjugal transfer protein TraP | - |
| EXE32_RS26350 (42587) | 42587..43114 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| EXE32_RS26355 (43165) | 43165..43569 | + | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| EXE32_RS26360 (43633) | 43633..43821 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| EXE32_RS26365 (43805) | 43805..44605 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| EXE32_RS26370 (44695) | 44695..47739 | + | 3045 | WP_001024771.1 | IncI1-type conjugal transfer protein TraU | - |
| EXE32_RS26375 (47739) | 47739..48353 | + | 615 | WP_032174792.1 | IncI1-type conjugal transfer protein TraV | - |
| EXE32_RS26380 (48320) | 48320..49522 | + | 1203 | WP_001189157.1 | IncI1-type conjugal transfer protein TraW | - |
| EXE32_RS26385 (49551) | 49551..50135 | + | 585 | WP_001037992.1 | IncI1-type conjugal transfer protein TraX | - |
| EXE32_RS26390 (50232) | 50232..52400 | + | 2169 | WP_000698356.1 | DotA/TraY family protein | - |
| EXE32_RS26395 (52471) | 52471..53133 | + | 663 | WP_000644795.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EXE32_RS26400 (53205) | 53205..53414 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| EXE32_RS26405 (53816) | 53816..53992 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| EXE32_RS26410 (54057) | 54057..54353 | - | 297 | WP_001275298.1 | DinQ-like type I toxin DqlB | - |
| EXE32_RS26415 (54653) | 54653..54904 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| EXE32_RS26420 (54976) | 54976..55128 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - (55178) | 55178..55240 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (55178) | 55178..55240 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (55178) | 55178..55240 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (55178) | 55178..55240 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| EXE32_RS26425 (55449) | 55449..56534 | + | 1086 | WP_250186221.1 | protein finQ | - |
| - (56604) | 56604..56662 | + | 59 | NuclAT_1 | - | - |
| - (56604) | 56604..56662 | + | 59 | NuclAT_1 | - | - |
| - (56604) | 56604..56662 | + | 59 | NuclAT_1 | - | - |
| - (56604) | 56604..56662 | + | 59 | NuclAT_1 | - | - |
| EXE32_RS26430 (56842) | 56842..58050 | + | 1209 | WP_001295719.1 | IncI1-type conjugal transfer protein TrbA | - |
| EXE32_RS26435 (58069) | 58069..59139 | + | 1071 | WP_000151590.1 | IncI1-type conjugal transfer protein TrbB | - |
| EXE32_RS26440 (59132) | 59132..61423 | + | 2292 | WP_096842292.1 | F-type conjugative transfer protein TrbC | - |
| EXE32_RS26445 (61495) | 61495..62313 | - | 819 | WP_000106194.1 | DUF2971 domain-containing protein | - |
| EXE32_RS26450 (62435) | 62435..65137 | - | 2703 | WP_024190603.1 | Protein TraI | Relaxase |
| EXE32_RS26455 (65148) | 65148..65480 | - | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| EXE32_RS26460 (65713) | 65713..66048 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| EXE32_RS26465 (66134) | 66134..66982 | - | 849 | WP_001077031.1 | DUF4942 domain-containing protein | - |
| EXE32_RS26470 (67226) | 67226..67402 | + | 177 | WP_164721506.1 | hypothetical protein | - |
| EXE32_RS26475 (67562) | 67562..67813 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| EXE32_RS26480 (67844) | 67844..68101 | - | 258 | WP_015056422.1 | hypothetical protein | VF |
| EXE32_RS26485 (68101) | 68101..69027 | - | 927 | WP_000038335.1 | Recombination-promoting nuclease RpnA | VF |
| EXE32_RS26490 (69092) | 69092..69358 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| EXE32_RS26495 (69452) | 69452..69886 | - | 435 | WP_000218858.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|