NZ_CP0358511..155153

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 155153 bp
Accession: NZ_CP035851        Location: 1..155153         Organism: Escherichia coli strain TW10590       Replicon: plasmid pTW10590_155


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EXE32_RS23920 (471) 471..680 - 210 WP_001353639.1 Hha/YmoA family nucleoid-associated regulatory protein -
EXE32_RS23925 (726) 726..1187 - 462 WP_001233850.1 thermonuclease family protein -
EXE32_RS23930 (1432) 1432..1644 - 213 WP_001301409.1 ANR family transcriptional regulator -
EXE32_RS23935 (1776) 1776..2336 - 561 WP_000139341.1 fertility inhibition protein FinO -
EXE32_RS23940 (2391) 2391..3092 - 702 WP_249530662.1 conjugal transfer pilus acetylase TraX -
EXE32_RS23945 (3147) 3147..3566 - 420 WP_000451342.1 hypothetical protein -
EXE32_RS23950 (3615) 3615..8885 - 5271 WP_216349612.1 conjugative transfer relaxase/helicase TraI -
EXE32_RS23955 (8885) 8885..11218 - 2334 WP_216349613.1 type IV conjugative transfer system coupling protein TraD -
EXE32_RS23960 (11269) 11269..11781 - 513 Protein_9 hypothetical protein -
EXE32_RS23965 (11812) 11812..13383 - 1572 WP_000381359.1 IS66-like element ISCro1 family transposase -
EXE32_RS23970 (13403) 13403..13750 - 348 WP_000624622.1 IS66 family insertion sequence element accessory protein TnpB -
EXE32_RS23975 (13750) 13750..14427 - 678 WP_001339397.1 IS66-like element accessory protein TnpA -
EXE32_RS23980 (14464) 14464..15213 - 750 WP_253207478.1 TraC family protein -
EXE32_RS26715 (15250) 15250..15631 - 382 Protein_14 hypothetical protein -
EXE32_RS23990 (15624) 15624..15845 - 222 WP_001278695.1 conjugal transfer protein TraR -
EXE32_RS23995 (15980) 15980..16495 - 516 WP_074481278.1 type IV conjugative transfer system lipoprotein TraV -
EXE32_RS24000 (16492) 16492..16743 - 252 WP_074481279.1 conjugal transfer protein TrbG -
EXE32_RS24005 (16736) 16736..17056 - 321 WP_001057295.1 conjugal transfer protein TrbD -
EXE32_RS24010 (17043) 17043..17609 - 567 WP_000896600.1 conjugal transfer pilus-stabilizing protein TraP -
EXE32_RS24015 (17599) 17599..19050 - 1452 WP_000146633.1 F-type conjugal transfer pilus assembly protein TraB -
EXE32_RS24020 (19050) 19050..19778 - 729 WP_001230778.1 type-F conjugative transfer system secretin TraK -
EXE32_RS24025 (19765) 19765..20331 - 567 WP_000399801.1 type IV conjugative transfer system protein TraE -
EXE32_RS24030 (20353) 20353..20664 - 312 WP_000012116.1 type IV conjugative transfer system protein TraL -
EXE32_RS24035 (20679) 20679..21044 - 366 WP_001098999.1 type IV conjugative transfer system pilin TraA -
EXE32_RS24040 (21077) 21077..21304 - 228 WP_000089263.1 conjugal transfer relaxosome protein TraY -
EXE32_RS26720 (21740) 21740..22111 - 372 WP_126688006.1 hypothetical protein -
EXE32_RS24050 (22305) 22305..22688 - 384 WP_000124827.1 conjugal transfer relaxosome DNA-binding protein TraM -
EXE32_RS24055 (23023) 23023..23613 + 591 WP_000252684.1 transglycosylase SLT domain-containing protein -
EXE32_RS24060 (23909) 23909..24730 - 822 WP_001234437.1 DUF932 domain-containing protein -
EXE32_RS24065 (24840) 24840..25136 - 297 WP_001272251.1 hypothetical protein -
EXE32_RS26725 (25436) 25436..25609 + 174 Protein_31 hypothetical protein -
EXE32_RS24075 (26338) 26338..28005 + 1668 WP_001091724.1 group II intron reverse transcriptase/maturase -
EXE32_RS24080 (28470) 28470..28712 - 243 WP_000540588.1 hypothetical protein -
EXE32_RS24085 (28771) 28771..29094 - 324 WP_000533253.1 hypothetical protein -
EXE32_RS24090 (29390) 29390..29639 + 250 Protein_35 hypothetical protein -
EXE32_RS24095 (29940) 29940..30062 - 123 WP_223163518.1 Hok/Gef family protein Toxin Detail
EXE32_RS26730 (30007) 30007..30120 - 114 Protein_37 DUF5431 family protein -
- (30154) 30154..30353 - 200 NuclAT_0 - Antitoxin Detail
- (30154) 30154..30353 - 200 NuclAT_0 - Antitoxin Detail
- (30154) 30154..30353 - 200 NuclAT_0 - Antitoxin Detail
- (30154) 30154..30353 - 200 NuclAT_0 - Antitoxin Detail
EXE32_RS24100 (30310) 30310..30624 - 315 WP_000870669.1 hypothetical protein -
EXE32_RS24105 (30621) 30621..31340 - 720 WP_000994097.1 plasmid SOS inhibition protein A -
EXE32_RS24110 (31337) 31337..31771 - 435 WP_000845966.1 conjugation system SOS inhibitor PsiB -
EXE32_RS24115 (31826) 31826..33784 - 1959 WP_001145496.1 ParB/RepB/Spo0J family partition protein -
EXE32_RS24120 (33843) 33843..34076 - 234 WP_000005975.1 DUF905 domain-containing protein -
EXE32_RS24125 (34132) 34132..34659 - 528 WP_000290816.1 single-stranded DNA-binding protein -
EXE32_RS26735 (34961) 34961..35134 + 174 Protein_44 hypothetical protein -
EXE32_RS24135 (35863) 35863..37530 + 1668 WP_001091724.1 group II intron reverse transcriptase/maturase -
EXE32_RS26740 (37643) 37643..37795 + 153 Protein_46 hypothetical protein -
EXE32_RS24140 (37881) 37881..38444 - 564 WP_001311069.1 class I SAM-dependent methyltransferase -
EXE32_RS24145 (38491) 38491..39852 - 1362 WP_000170673.1 DUF3560 domain-containing protein -
EXE32_RS24150 (39904) 39904..40134 - 231 WP_000218642.1 hypothetical protein -
EXE32_RS26745 (40546) 40546..40800 + 255 Protein_50 hypothetical protein -
EXE32_RS24160 (41529) 41529..43196 + 1668 WP_001091724.1 group II intron reverse transcriptase/maturase -
EXE32_RS24165 (43355) 43355..43978 - 624 WP_000088605.1 tetracycline resistance transcriptional repressor TetR(B) -
EXE32_RS24170 (44060) 44060..45265 + 1206 WP_032259273.1 tetracycline efflux MFS transporter Tet(B) -
EXE32_RS24175 (45378) 45378..45971 - 594 WP_032213584.1 tetracyline resistance-associated transcriptional repressor TetC -
EXE32_RS24180 (46291) 46291..46482 - 192 WP_001027516.1 hypothetical protein -
EXE32_RS24185 (46479) 46479..46901 - 423 WP_000271709.1 DUF1380 family protein -
EXE32_RS24190 (46948) 46948..47373 - 426 WP_001198895.1 antirestriction protein -
EXE32_RS24195 (47789) 47789..48559 - 771 WP_001006247.1 hypothetical protein -
EXE32_RS24200 (48604) 48604..49122 - 519 WP_223156508.1 DUF1380 family protein -
EXE32_RS24205 (49052) 49052..49273 - 222 WP_001104865.1 hypothetical protein -
EXE32_RS24210 (49274) 49274..49957 - 684 WP_000085884.1 DNA methylase -
EXE32_RS24215 (50034) 50034..50345 - 312 WP_032144809.1 hypothetical protein -
EXE32_RS24220 (50342) 50342..51244 - 903 WP_001513647.1 DUF1281 domain-containing protein -
EXE32_RS26750 (51339) 51339..51608 - 270 WP_072126982.1 hypothetical protein -
EXE32_RS24225 (51779) 51779..52741 + 963 WP_000959884.1 plasmid segregation protein ParM -
EXE32_RS24230 (52744) 52744..53094 + 351 WP_001414994.1 plasmid partitioning/stability family protein -
EXE32_RS24235 (53203) 53203..53463 + 261 WP_024220876.1 hypothetical protein -
EXE32_RS24240 (53488) 53488..53883 - 396 Protein_68 Tn3 family transposase -
EXE32_RS24245 (53935) 53935..54639 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
EXE32_RS24250 (54676) 54676..55443 - 768 WP_000480974.1 APH(6)-I family aminoglycoside O-phosphotransferase -
EXE32_RS24255 (55443) 55443..56246 - 804 WP_001082319.1 aminoglycoside O-phosphotransferase APH(3'')-Ib -
EXE32_RS24260 (56307) 56307..57122 - 816 WP_001043260.1 sulfonamide-resistant dihydropteroate synthase Sul2 -
EXE32_RS24265 (57459) 57459..57662 + 204 WP_000131876.1 hypothetical protein -
EXE32_RS24270 (57653) 57653..57874 + 222 WP_001251694.1 hypothetical protein -
EXE32_RS24275 (58109) 58109..58468 - 360 WP_000050069.1 hypothetical protein -
EXE32_RS24280 (58625) 58625..59485 - 861 WP_000027057.1 broad-spectrum class A beta-lactamase TEM-1 -
EXE32_RS24285 (59776) 59776..60480 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
EXE32_RS24290 (60576) 60576..61085 + 510 WP_000571065.1 trimethoprim-resistant dihydrofolate reductase DfrA8 -
EXE32_RS24295 (61082) 61082..61738 + 657 WP_000144779.1 metallophosphoesterase -
EXE32_RS24300 (61775) 61775..62479 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
EXE32_RS24305 (62532) 62532..63731 - 1200 Protein_81 conjugative relaxase -
EXE32_RS24310 (63731) 63731..65983 - 2253 WP_000009339.1 type IV conjugative transfer system coupling protein TraD -
EXE32_RS24315 (66034) 66034..66771 - 738 WP_032231676.1 hypothetical protein -
EXE32_RS24320 (66974) 66974..67684 - 711 WP_042032882.1 conjugal transfer complement resistance protein TraT -
EXE32_RS24325 (67737) 67737..68234 - 498 WP_000605862.1 entry exclusion protein -
EXE32_RS24330 (68253) 68253..71072 - 2820 WP_032231677.1 conjugal transfer mating-pair stabilization protein TraG -
EXE32_RS24335 (71069) 71069..72442 - 1374 WP_032231679.1 conjugal transfer pilus assembly protein TraH -
EXE32_RS24340 (72429) 72429..72821 - 393 WP_000138372.1 F-type conjugal transfer protein TrbF -
EXE32_RS24345 (72775) 72775..73089 - 315 WP_001353640.1 P-type conjugative transfer protein TrbJ -
EXE32_RS24350 (73079) 73079..73624 - 546 WP_032231681.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
EXE32_RS24355 (73611) 73611..73895 - 285 WP_000624108.1 type-F conjugative transfer system pilin chaperone TraQ -
EXE32_RS24360 (74292) 74292..74633 - 342 WP_001423199.1 conjugal transfer protein TrbA -
EXE32_RS24365 (74647) 74647..75390 - 744 WP_001462109.1 type-F conjugative transfer system pilin assembly protein TraF -
EXE32_RS24370 (75383) 75383..75640 - 258 WP_000864319.1 conjugal transfer protein TrbE -
EXE32_RS24375 (75667) 75667..77529 - 1863 WP_223363321.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
EXE32_RS24380 (77765) 77765..78145 - 381 WP_032259120.1 hypothetical protein -
EXE32_RS24385 (78142) 78142..78780 - 639 WP_001104082.1 type-F conjugative transfer system pilin assembly protein TrbC -
EXE32_RS24390 (78808) 78808..79260 - 453 WP_000069431.1 hypothetical protein -
EXE32_RS24395 (79290) 79290..79751 - 462 WP_000277848.1 hypothetical protein -
EXE32_RS24400 (79777) 79777..80094 - 318 Protein_100 TraU family protein -
EXE32_RS24405 (80264) 80264..80572 - 309 WP_032231685.1 hypothetical protein -
EXE32_RS24410 (80598) 80598..81590 - 993 WP_000830836.1 conjugal transfer pilus assembly protein TraU -
EXE32_RS24415 (81587) 81587..82219 - 633 WP_001377749.1 type-F conjugative transfer system protein TraW -
EXE32_RS24420 (82216) 82216..82602 - 387 WP_000214080.1 type-F conjugative transfer system protein TrbI -
EXE32_RS24425 (82599) 82599..85226 - 2628 WP_001064259.1 type IV secretion system protein TraC -
EXE32_RS24430 (85386) 85386..85607 - 222 WP_001278694.1 conjugal transfer protein TraR -
EXE32_RS24435 (85742) 85742..86257 - 516 WP_000809837.1 type IV conjugative transfer system lipoprotein TraV -
EXE32_RS24440 (86254) 86254..86505 - 252 WP_001362535.1 conjugal transfer protein TrbG -
EXE32_RS24445 (86498) 86498..86818 - 321 WP_001057295.1 conjugal transfer protein TrbD -
EXE32_RS24450 (86805) 86805..87371 - 567 WP_000896600.1 conjugal transfer pilus-stabilizing protein TraP -
EXE32_RS24455 (87361) 87361..88812 - 1452 WP_000146633.1 F-type conjugal transfer pilus assembly protein TraB -
EXE32_RS24460 (88812) 88812..89540 - 729 WP_001230778.1 type-F conjugative transfer system secretin TraK -
EXE32_RS24465 (89527) 89527..90093 - 567 WP_000399801.1 type IV conjugative transfer system protein TraE -
EXE32_RS24470 (90115) 90115..90426 - 312 WP_000012116.1 type IV conjugative transfer system protein TraL -
EXE32_RS24475 (90441) 90441..90806 - 366 WP_001098999.1 type IV conjugative transfer system pilin TraA -
EXE32_RS24480 (90838) 90838..91239 - 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
EXE32_RS24485 (91332) 91332..92021 - 690 WP_000283390.1 conjugal transfer transcriptional regulator TraJ -
EXE32_RS24490 (92208) 92208..92591 - 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
EXE32_RS24495 (92913) 92913..93515 + 603 WP_077631932.1 transglycosylase SLT domain-containing protein -
EXE32_RS24500 (93812) 93812..94630 - 819 WP_074481281.1 DUF932 domain-containing protein -
EXE32_RS24505 (94741) 94741..95037 - 297 WP_001272248.1 hypothetical protein -
EXE32_RS26755 (95334) 95334..95507 + 174 Protein_122 hypothetical protein -
EXE32_RS24510 (96236) 96236..97903 + 1668 WP_001091724.1 group II intron reverse transcriptase/maturase -
EXE32_RS24515 (98215) 98215..98406 - 192 WP_001024838.1 hypothetical protein -
EXE32_RS24520 (98403) 98403..98825 - 423 WP_000271732.1 DUF1380 family protein -
EXE32_RS24525 (98872) 98872..99297 - 426 WP_001198874.1 antirestriction protein -
EXE32_RS24530 (99709) 99709..100479 - 771 WP_052908055.1 hypothetical protein -
EXE32_RS24535 (100524) 100524..101078 - 555 WP_077627405.1 DUF1380 family protein -
EXE32_RS24540 (100972) 100972..101193 - 222 WP_001104871.1 hypothetical protein -
EXE32_RS24545 (101194) 101194..101877 - 684 WP_000085868.1 DNA methylase -
EXE32_RS26760 (101953) 101953..102027 - 75 Protein_131 hypothetical protein -
EXE32_RS24550 (102574) 102574..103590 - 1017 WP_000219394.1 IS110-like element ISShdy1 family transposase -
EXE32_RS26765 (103688) 103688..103931 - 244 Protein_133 hypothetical protein -
EXE32_RS24555 (103928) 103928..104830 - 903 WP_216349615.1 DUF1281 domain-containing protein -
EXE32_RS24560 (104940) 104940..105230 - 291 WP_074481295.1 hypothetical protein -
EXE32_RS24565 (105254) 105254..105676 - 423 WP_000774834.1 plasmid partitioning/stability family protein -
EXE32_RS24570 (105679) 105679..106659 - 981 WP_001218105.1 plasmid segregation protein ParM -
EXE32_RS24575 (106862) 106862..106981 + 120 Protein_138 transposase domain-containing protein -
EXE32_RS24580 (107049) 107049..107615 - 567 WP_024171032.1 hypothetical protein -
EXE32_RS24585 (108262) 108262..108819 + 558 WP_000103553.1 TetR/AcrR family transcriptional regulator -
EXE32_RS24590 (109128) 109128..109418 + 291 WP_000754126.1 DUF2282 domain-containing protein -
EXE32_RS24595 (109450) 109450..110376 + 927 WP_000989040.1 DUF692 domain-containing protein -
EXE32_RS24600 (110345) 110345..111103 + 759 WP_001181584.1 DNA-binding domain-containing protein -
EXE32_RS24605 (111105) 111105..111632 + 528 WP_001196880.1 DoxX family protein -
EXE32_RS24610 (111965) 111965..112327 - 363 WP_000181069.1 hypothetical protein -
EXE32_RS24615 (112324) 112324..112515 - 192 WP_000175572.1 DUF2164 family protein -
EXE32_RS24620 (112712) 112712..112813 - 102 Protein_147 methionyl-tRNA formyltransferase -
EXE32_RS24625 (112828) 112828..113337 - 510 WP_000115001.1 peptide deformylase -
EXE32_RS24630 (113661) 113661..114833 + 1173 WP_000952428.1 IS21-like element ISEc62 family transposase -
EXE32_RS24635 (114833) 114833..115627 + 795 WP_000544809.1 IS21-like element helper ATPase IstB -
EXE32_RS24640 (115683) 115683..116105 - 423 Protein_151 DUF1281 domain-containing protein -
EXE32_RS24645 (116528) 116528..118099 - 1572 WP_000381359.1 IS66-like element ISCro1 family transposase -
EXE32_RS24650 (118119) 118119..118466 - 348 WP_000624622.1 IS66 family insertion sequence element accessory protein TnpB -
EXE32_RS24655 (118466) 118466..119143 - 678 WP_001339397.1 IS66-like element accessory protein TnpA -
EXE32_RS24660 (119421) 119421..120392 - 972 WP_216349610.1 ParB/RepB/Spo0J family plasmid partition protein -
EXE32_RS24665 (120392) 120392..121558 - 1167 WP_000772446.1 plasmid-partitioning protein SopA -
EXE32_RS24670 (122091) 122091..122564 - 474 Protein_157 IS3 family transposase -
EXE32_RS24675 (122654) 122654..124162 - 1509 WP_001189123.1 group II intron reverse transcriptase/maturase -
EXE32_RS24680 (124835) 124835..125574 - 740 Protein_159 IS3 family transposase -
EXE32_RS24685 (125635) 125635..126414 + 780 Protein_160 IS66 family transposase -
EXE32_RS24690 (126558) 126558..127183 - 626 Protein_161 transposase -
EXE32_RS24695 (127634) 127634..128610 + 977 Protein_162 RepB family plasmid replication initiator protein -
EXE32_RS24700 (128853) 128853..129593 - 741 WP_001066944.1 tyrosine-type recombinase/integrase -
EXE32_RS24705 (129714) 129714..129842 - 129 Protein_164 serine/threonine protein kinase -
EXE32_RS24710 (130794) 130794..131099 + 306 WP_000336590.1 PapB/FocB family fimbrial expression transcriptional regulator -
EXE32_RS24715 (131351) 131351..132247 + 897 WP_126687956.1 transcriptional regulator HilD -
EXE32_RS24720 (132261) 132261..132704 + 444 WP_001220546.1 lytic transglycosylase domain-containing protein -
EXE32_RS24725 (133003) 133003..133713 + 711 WP_113705914.1 type IV pilus major pilin -
EXE32_RS24730 (133776) 133776..135347 + 1572 WP_001759776.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
EXE32_RS24735 (135366) 135366..135779 + 414 WP_001201934.1 TcpQ domain-containing protein -
EXE32_RS24740 (135797) 135797..137254 + 1458 WP_000768353.1 hypothetical protein -
EXE32_RS24745 (137257) 137257..137817 + 561 WP_001047585.1 type IV pilus Longus assembly protein LngE -
EXE32_RS24750 (137819) 137819..138646 + 828 WP_001054274.1 hypothetical protein -
EXE32_RS24755 (138634) 138634..139119 + 486 WP_000336152.1 type IV pilus Longus-associated protein LngG -
EXE32_RS24760 (139317) 139317..140651 + 1335 WP_001380305.1 ATPase, T2SS/T4P/T4SS family -
EXE32_RS24765 (140635) 140635..141660 + 1026 WP_001759772.1 type II secretion system F family protein -
EXE32_RS24770 (141675) 141675..142796 + 1122 WP_000857355.1 hypothetical protein -
EXE32_RS24775 (142799) 142799..143653 + 855 WP_000289148.1 A24 family peptidase -
EXE32_RS24780 (144672) 144672..145900 + 1229 WP_088895425.1 IS3-like element IS2 family transposase -
EXE32_RS26770 (146279) 146279..146383 + 105 Protein_180 hypothetical protein -
EXE32_RS24785 (146346) 146346..146881 - 536 Protein_181 transposase -
EXE32_RS24790 (147083) 147083..148264 - 1182 WP_126688001.1 DUF3800 domain-containing protein -
EXE32_RS26775 (148452) 148452..148535 + 84 Protein_183 hypothetical protein -
EXE32_RS24795 (148522) 148522..149109 + 588 Protein_184 IS91 family transposase -
EXE32_RS26780 (149259) 149259..149438 - 180 WP_126688003.1 hypothetical protein -
EXE32_RS24800 (150142) 150142..150999 - 858 WP_216349611.1 incFII family plasmid replication initiator RepA -
EXE32_RS24805 (150992) 150992..151066 - 75 WP_011387702.1 RepA leader peptide Tap -
EXE32_RS24810 (151300) 151300..151557 - 258 WP_000083826.1 replication regulatory protein RepA -
EXE32_RS24815 (151841) 151841..151990 - 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
- (152034) 152034..152095 + 62 NuclAT_1 - Antitoxin Detail
- (152034) 152034..152095 + 62 NuclAT_1 - Antitoxin Detail
- (152034) 152034..152095 + 62 NuclAT_1 - Antitoxin Detail
- (152034) 152034..152095 + 62 NuclAT_1 - Antitoxin Detail
EXE32_RS24820 (152247) 152247..152711 - 465 WP_001756974.1 hypothetical protein -
EXE32_RS24825 (152946) 152946..154118 + 1173 WP_000952428.1 IS21-like element ISEc62 family transposase -
EXE32_RS24830 (154118) 154118..154912 + 795 WP_000544809.1 IS21-like element helper ATPase IstB -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance