MGE detailed information
MGE type: IScluster/Tn MGE length: 17555 bp
Accession: NZ_CP035842 Location: 52352..69906 Organism: Escherichia coli strain TW10722 Replicon: plasmid pTW10722_147
Accession: NZ_CP035842 Location: 52352..69906 Organism: Escherichia coli strain TW10722 Replicon: plasmid pTW10722_147
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA02_RS26050 (47438) | 47438..47578 | + | 141 | WP_000078916.1 | Hok/Gef family protein | - |
| EXA02_RS26055 (47756) | 47756..48088 | + | 333 | WP_001173923.1 | hypothetical protein | - |
| EXA02_RS28470 (48093) | 48093..48374 | + | 282 | WP_016607956.1 | hypothetical protein | - |
| EXA02_RS28475 (48437) | 48437..49003 | + | 567 | WP_071594475.1 | type VI secretion system-associated protein TagO | - |
| EXA02_RS26065 (49149) | 49149..49307 | + | 159 | Protein_71 | topoisomerase C-terminal repeat-containing protein | - |
| EXA02_RS26070 (49447) | 49447..49710 | + | 264 | WP_000063166.1 | hypothetical protein | - |
| EXA02_RS26075 (50643) | 50643..50798 | + | 156 | WP_000074142.1 | hypothetical protein | - |
| EXA02_RS26080 (50847) | 50847..51839 | + | 993 | WP_001398380.1 | hypothetical protein | - |
| EXA02_RS26085 (51941) | 51941..52057 | - | 117 | Protein_75 | plasmid stabilization protein | - |
| EXA02_RS26090 (52352) | 52352..53374 | - | 1023 | WP_001398381.1 | IS110 family transposase ISSm1 | Transposase |
| EXA02_RS26095 (53533) | 53533..55359 | - | 1827 | WP_001239408.1 | AAA family ATPase | - |
| EXA02_RS26100 (55390) | 55390..55947 | - | 558 | WP_001398382.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| EXA02_RS26105 (56432) | 56432..56779 | - | 348 | WP_000142443.1 | DUF6404 family protein | - |
| EXA02_RS26110 (56908) | 56908..57243 | + | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| EXA02_RS26115 (57265) | 57265..59145 | - | 1881 | WP_021018667.1 | colicin Ia central receptor-binding domain-containing protein | - |
| EXA02_RS26120 (59424) | 59424..59801 | - | 378 | Protein_82 | hypothetical protein | - |
| EXA02_RS26125 (59888) | 59888..60910 | + | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| EXA02_RS26130 (60907) | 60907..61689 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| EXA02_RS26135 (61911) | 61911..62258 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| EXA02_RS26140 (62255) | 62255..62635 | - | 381 | WP_001466366.1 | IS66 family transposase ISEc8 | Transposase |
| EXA02_RS26145 (62992) | 62992..63798 | - | 807 | WP_000099345.1 | site-specific integrase | - |
| EXA02_RS26150 (63799) | 63799..64104 | - | 306 | WP_001159861.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EXA02_RS26155 (64106) | 64106..64324 | - | 219 | WP_000813631.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EXA02_RS26160 (64879) | 64879..65568 | + | 690 | WP_001095858.1 | helix-turn-helix domain-containing protein | - |
| EXA02_RS26165 (65644) | 65644..66756 | + | 1113 | WP_024179954.1 | IS4 family transposase IS421 | Transposase |
| EXA02_RS26170 (66951) | 66951..67640 | - | 690 | WP_001433458.1 | RES family NAD+ phosphorylase | - |
| EXA02_RS26175 (68060) | 68060..68290 | + | 231 | WP_001261281.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| EXA02_RS26180 (68287) | 68287..68703 | + | 417 | WP_001044769.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EXA02_RS26185 (68879) | 68879..69997 | + | 1119 | Protein_95 | IS3 family transposase ISEc17 | Transposase |
| EXA02_RS28480 (70932) | 70932..71705 | + | 774 | WP_236923691.1 | apolipoprotein acyltransferase | - |
| EXA02_RS26195 (71724) | 71724..71873 | + | 150 | WP_001399277.1 | ATP-binding protein | - |
| EXA02_RS26200 (72267) | 72267..72494 | - | 228 | WP_001757586.1 | bacterial lipid A biosynthesis acyltransferase family protein | - |
| EXA02_RS26205 (72746) | 72746..73372 | - | 627 | WP_000593827.1 | ABC transporter ATP-binding protein | - |
| EXA02_RS26210 (73365) | 73365..74138 | - | 774 | WP_021018664.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|