MGE detailed information
MGE type: Conjugative plasmid MGE length: 75047 bp
Accession: NZ_CP035830 Location: 1..75047 Organism: Escherichia coli strain 67-1 Replicon: plasmid p67_75
Accession: NZ_CP035830 Location: 1..75047 Organism: Escherichia coli strain 67-1 Replicon: plasmid p67_75
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA05_RS26175 (1028) | 1028..1642 | - | 615 | WP_032174792.1 | IncI1-type conjugal transfer protein TraV | - |
| EXA05_RS26185 (2916) | 2916..5999 | - | 3084 | WP_217704800.1 | IncI1-type conjugal transfer protein TraU | - |
| EXA05_RS26190 (6089) | 6089..6889 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| EXA05_RS26195 (6873) | 6873..7061 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| EXA05_RS26200 (7125) | 7125..7529 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| EXA05_RS26205 (7580) | 7580..8107 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| EXA05_RS26210 (8107) | 8107..8811 | - | 705 | WP_001295718.1 | IncI1-type conjugal transfer protein TraP | - |
| EXA05_RS26215 (8811) | 8811..10100 | - | 1290 | WP_001271993.1 | conjugal transfer protein TraO | - |
| EXA05_RS26220 (10103) | 10103..11086 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| EXA05_RS26225 (11097) | 11097..11789 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| EXA05_RS26230 (11786) | 11786..12133 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| EXA05_RS26235 (12151) | 12151..15918 | - | 3768 | WP_001141524.1 | DUF5710 domain-containing protein | - |
| EXA05_RS26240 (16008) | 16008..16559 | - | 552 | WP_000014585.1 | Phospholipase D | VF |
| EXA05_RS26245 (16574) | 16574..16864 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| EXA05_RS26250 (16861) | 16861..18009 | - | 1149 | WP_001024968.1 | putative protein YggR | VF |
| EXA05_RS26255 (18170) | 18170..18820 | + | 651 | WP_000993921.1 | IS66 family transposase IS679 | Transposase |
| EXA05_RS26260 (18820) | 18820..19167 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXA05_RS26265 (19187) | 19187..20758 | + | 1572 | WP_000381449.1 | IS66 family transposase IS679 | Transposase |
| EXA05_RS26270 (20787) | 20787..21536 | - | 750 | Protein_20 | hypothetical protein | VF |
| EXA05_RS26275 (21533) | 21533..21991 | - | 459 | WP_001079806.1 | hypothetical protein | VF |
| EXA05_RS26280 (22386) | 22386..22970 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| EXA05_RS26285 (23030) | 23030..24232 | - | 1203 | WP_000976355.1 | conjugal transfer protein TraF | - |
| EXA05_RS26290 (24318) | 24318..25142 | - | 825 | WP_001238934.1 | conjugal transfer protein TraE | - |
| EXA05_RS26295 (25293) | 25293..25445 | - | 153 | WP_001399803.1 | hypothetical protein | - |
| EXA05_RS26300 (25383) | 25383..25646 | + | 264 | Protein_26 | transposase | - |
| EXA05_RS26305 (25703) | 25703..26896 | - | 1194 | WP_001168170.1 | hypothetical protein | VF |
| EXA05_RS26310 (26914) | 26914..27540 | - | 627 | WP_000939938.1 | prepilin peptidase | - |
| EXA05_RS26315 (27556) | 27556..28041 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| EXA05_RS26320 (28086) | 28086..28622 | - | 537 | WP_000111522.1 | hypothetical protein | VF |
| EXA05_RS26325 (28684) | 28684..29778 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EXA05_RS26330 (29780) | 29780..31288 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| EXA05_RS26335 (31391) | 31391..31849 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| EXA05_RS26340 (31839) | 31839..33134 | - | 1296 | WP_000129884.1 | type 4b pilus protein PilO2 | - |
| EXA05_RS26345 (33155) | 33155..34774 | - | 1620 | WP_001035559.1 | Outer membrane lipoprotein BfpB | VF |
| EXA05_RS26350 (34806) | 34806..35243 | - | 438 | WP_000539951.1 | hypothetical protein | VF |
| EXA05_RS26355 (35247) | 35247..36317 | - | 1071 | WP_000730432.1 | hypothetical protein | VF |
| EXA05_RS26360 (36544) | 36544..36879 | - | 336 | WP_024168261.1 | hypothetical protein | - |
| EXA05_RS26365 (36995) | 36995..37141 | - | 147 | WP_235777688.1 | PilI type IV pilus biogenesis protein | - |
| EXA05_RS26370 (37496) | 37496..38161 | - | 666 | WP_000154140.1 | hypothetical protein | - |
| EXA05_RS26375 (38302) | 38302..38808 | - | 507 | WP_001317510.1 | transcription termination/antitermination NusG family protein | - |
| EXA05_RS26380 (39646) | 39646..40677 | + | 1032 | WP_000907882.1 | plasmid replication initiator RepA | - |
| EXA05_RS26385 (41585) | 41585..41869 | + | 285 | WP_001297026.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EXA05_RS26390 (41869) | 41869..42144 | + | 276 | WP_000421261.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EXA05_RS26395 (42250) | 42250..42453 | + | 204 | Protein_45 | hypothetical protein | - |
| EXA05_RS26400 (42722) | 42722..42988 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| EXA05_RS26405 (43126) | 43126..43728 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| EXA05_RS26410 (44082) | 44082..45428 | + | 1347 | WP_001132022.1 | protein YagA | - |
| EXA05_RS26415 (45947) | 45947..46249 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| EXA05_RS26420 (46246) | 46246..46872 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| EXA05_RS26425 (47068) | 47068..48339 | - | 1272 | WP_000457506.1 | Y-family DNA polymerase | - |
| EXA05_RS26430 (48339) | 48339..48776 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EXA05_RS26435 (48773) | 48773..49021 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| EXA05_RS26440 (49439) | 49439..50341 | + | 903 | WP_077628965.1 | DUF1281 domain-containing protein | - |
| EXA05_RS26445 (50338) | 50338..50649 | + | 312 | WP_021018648.1 | hypothetical protein | - |
| EXA05_RS26450 (50725) | 50725..51408 | + | 684 | WP_000086129.1 | DNA methylase | - |
| EXA05_RS26455 (51409) | 51409..51630 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| EXA05_RS26460 (51644) | 51644..52078 | + | 435 | WP_000274494.1 | DUF1380 family protein | - |
| EXA05_RS26465 (52124) | 52124..52900 | + | 777 | WP_001005040.1 | hypothetical protein | - |
| EXA05_RS26470 (53312) | 53312..53812 | + | 501 | WP_000117614.1 | antirestriction protein ArdA | - |
| EXA05_RS26475 (53952) | 53952..54308 | - | 357 | WP_240589361.1 | hypothetical protein | - |
| EXA05_RS26480 (54542) | 54542..54976 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| EXA05_RS26485 (55070) | 55070..55336 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| EXA05_RS26490 (55401) | 55401..56327 | + | 927 | WP_000038335.1 | Recombination-promoting nuclease RpnA | VF |
| EXA05_RS26495 (56327) | 56327..56584 | + | 258 | WP_015056422.1 | hypothetical protein | VF |
| EXA05_RS26500 (56615) | 56615..56866 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| EXA05_RS26505 (57026) | 57026..57202 | - | 177 | WP_164721506.1 | hypothetical protein | - |
| EXA05_RS26510 (57446) | 57446..58294 | + | 849 | WP_001077031.1 | DUF4942 domain-containing protein | - |
| EXA05_RS26515 (58380) | 58380..58715 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| EXA05_RS26520 (58948) | 58948..59280 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| EXA05_RS26525 (59291) | 59291..61993 | + | 2703 | WP_024190603.1 | Protein TraI | Relaxase |
| EXA05_RS26530 (62115) | 62115..62933 | + | 819 | WP_000106194.1 | DUF2971 domain-containing protein | - |
| EXA05_RS26535 (63005) | 63005..65296 | - | 2292 | WP_096842292.1 | F-type conjugative transfer protein TrbC | - |
| EXA05_RS26540 (65289) | 65289..66359 | - | 1071 | WP_000151590.1 | IncI1-type conjugal transfer protein TrbB | - |
| EXA05_RS26545 (66378) | 66378..67586 | - | 1209 | WP_001295719.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (67766) | 67766..67824 | - | 59 | NuclAT_1 | - | - |
| - (67766) | 67766..67824 | - | 59 | NuclAT_1 | - | - |
| - (67766) | 67766..67824 | - | 59 | NuclAT_1 | - | - |
| - (67766) | 67766..67824 | - | 59 | NuclAT_1 | - | - |
| EXA05_RS26550 (67894) | 67894..68673 | - | 780 | WP_276312874.1 | protein FinQ | - |
| - (69188) | 69188..69250 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (69188) | 69188..69250 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (69188) | 69188..69250 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (69188) | 69188..69250 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| EXA05_RS26555 (69300) | 69300..69452 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| EXA05_RS26560 (69524) | 69524..69775 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| EXA05_RS27005 (70276) | 70276..70371 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| EXA05_RS26570 (70436) | 70436..70612 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| EXA05_RS26575 (71014) | 71014..71223 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| EXA05_RS26580 (71295) | 71295..71957 | - | 663 | WP_000644795.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EXA05_RS26585 (72028) | 72028..74196 | - | 2169 | WP_000698356.1 | DotA/TraY family protein | - |
| EXA05_RS26590 (74293) | 74293..74877 | - | 585 | WP_001037992.1 | IncI1-type conjugal transfer protein TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|