MGE detailed information
MGE type: Conjugative plasmid MGE length: 66171 bp
Accession: NZ_CP035752 Location: 1..66171 Organism: Escherichia coli E110019 Replicon: plasmid pE110019_66
Accession: NZ_CP035752 Location: 1..66171 Organism: Escherichia coli E110019 Replicon: plasmid pE110019_66
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECE110019_RS25830 () | 1359..1898 | + | 540 | WP_000290791.1 | single-stranded DNA-binding protein | - |
| ECE110019_RS25835 () | 1961..2194 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| ECE110019_RS25840 () | 2260..4218 | + | 1959 | WP_000117175.1 | ParB/RepB/Spo0J family partition protein | - |
| ECE110019_RS25845 () | 4273..4707 | + | 435 | WP_000845934.1 | conjugation system SOS inhibitor PsiB | - |
| ECE110019_RS25850 () | 4704..5423 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| - () | 5435..5659 | + | 225 | NuclAT_0 | - | - |
| - () | 5435..5659 | + | 225 | NuclAT_0 | - | - |
| - () | 5435..5659 | + | 225 | NuclAT_0 | - | - |
| - () | 5435..5659 | + | 225 | NuclAT_0 | - | - |
| ECE110019_RS25855 () | 5703..5861 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| ECE110019_RS25860 () | 6215..6427 | - | 213 | WP_162817365.1 | hypothetical protein | - |
| ECE110019_RS25870 () | 6783..7070 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| ECE110019_RS25875 () | 7188..8009 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| ECE110019_RS25880 () | 8306..8896 | - | 591 | WP_165899088.1 | transglycosylase SLT domain-containing protein | - |
| ECE110019_RS25885 () | 9229..9612 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| ECE110019_RS25890 () | 9799..10488 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| ECE110019_RS25895 () | 10587..10982 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| ECE110019_RS25900 () | 11015..11377 | + | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| ECE110019_RS25905 () | 11382..11693 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| ECE110019_RS25910 () | 11715..12281 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| ECE110019_RS25915 () | 12292..12996 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| ECE110019_RS25920 () | 12996..14423 | + | 1428 | WP_000146672.1 | conjugal transfer protein TraB | - |
| ECE110019_RS25925 () | 14413..15000 | + | 588 | WP_000002774.1 | conjugal transfer protein TraP | - |
| ECE110019_RS25930 () | 14939..15307 | + | 369 | WP_071787938.1 | conjugal transfer protein TrbD | - |
| ECE110019_RS25935 () | 15304..15819 | + | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ECE110019_RS25940 () | 15954..16175 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| ECE110019_RS25945 () | 16335..18962 | + | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| ECE110019_RS25950 () | 18959..19345 | + | 387 | WP_000099687.1 | type-F conjugative transfer system protein TrbI | - |
| ECE110019_RS25955 () | 19342..19974 | + | 633 | WP_001203725.1 | type-F conjugative transfer system protein TraW | - |
| ECE110019_RS25960 () | 19971..20963 | + | 993 | WP_000830840.1 | conjugal transfer pilus assembly protein TraU | - |
| ECE110019_RS25965 () | 20972..21610 | + | 639 | WP_000777691.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| ECE110019_RS25970 () | 21607..23415 | + | 1809 | WP_000821845.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| ECE110019_RS25975 () | 23442..23702 | + | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| ECE110019_RS25980 () | 23695..24438 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| ECE110019_RS25985 () | 24554..24835 | + | 282 | WP_000549795.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ECE110019_RS25990 () | 24822..25367 | + | 546 | WP_000052613.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| ECE110019_RS25995 () | 25297..25659 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| ECE110019_RS26000 () | 25659..27032 | + | 1374 | WP_170926237.1 | conjugal transfer protein TraH | - |
| ECE110019_RS26005 () | 27029..29851 | + | 2823 | WP_001007048.1 | conjugal transfer mating pair stabilization protein TraG | - |
| ECE110019_RS26010 () | 29866..30369 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| ECE110019_RS26015 () | 30401..31132 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| ECE110019_RS26020 () | 31385..33628 | + | 2244 | WP_000009374.1 | type IV conjugative transfer system coupling protein TraD | - |
| ECE110019_RS26025 () | 33628..38898 | + | 5271 | WP_000986983.1 | conjugative transfer relaxase/helicase TraI | - |
| ECE110019_RS26030 () | 38918..39661 | + | 744 | WP_000205704.1 | conjugal transfer pilus acetylase TraX | - |
| ECE110019_RS26035 () | 39716..40276 | + | 561 | WP_024184455.1 | fertility inhibition protein FinO | - |
| ECE110019_RS26040 () | 40412..40624 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| ECE110019_RS26045 () | 40871..41332 | + | 462 | WP_000978818.1 | thermonuclease family protein | - |
| ECE110019_RS26050 () | 41378..41587 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| ECE110019_RS26055 () | 41626..42216 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| ECE110019_RS26060 () | 42456..42716 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| ECE110019_RS26065 () | 42941..43015 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| ECE110019_RS26070 () | 43008..43865 | + | 858 | WP_000131009.1 | incFII family plasmid replication initiator RepA | - |
| ECE110019_RS26080 () | 44780..45049 | + | 270 | WP_000079931.1 | hypothetical protein | Antitoxin Detail |
| ECE110019_RS26085 () | 45046..45327 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ECE110019_RS26090 () | 45419..45942 | - | 524 | Protein_51 | IS1 family transposase | - |
| ECE110019_RS26095 () | 46469..46919 | + | 451 | Protein_52 | hypothetical protein | - |
| ECE110019_RS26100 () | 47072..47776 | + | 705 | WP_001067859.1 | IS6 family transposase | - |
| ECE110019_RS26105 () | 47914..48978 | - | 1065 | WP_000946279.1 | fimbrial protein | - |
| ECE110019_RS26110 () | 48994..51485 | - | 2492 | Protein_55 | fimbrial biogenesis outer membrane usher protein | - |
| ECE110019_RS26115 () | 51501..52193 | - | 693 | WP_001223973.1 | molecular chaperone | - |
| ECE110019_RS26120 () | 52246..52830 | - | 585 | WP_000477040.1 | type 1 fimbrial protein | - |
| ECE110019_RS26125 () | 53193..54005 | + | 813 | WP_000876162.1 | winged helix-turn-helix domain-containing protein | - |
| ECE110019_RS26130 () | 54029..54208 | + | 180 | Protein_59 | hypothetical protein | - |
| ECE110019_RS26135 () | 54277..54375 | + | 99 | Protein_60 | IS5/IS1182 family transposase | - |
| ECE110019_RS26140 () | 54390..55087 | - | 698 | Protein_61 | IS1 family transposase | - |
| ECE110019_RS26145 () | 55166..55863 | - | 698 | Protein_62 | IS1 family transposase | - |
| ECE110019_RS26150 () | 55906..56049 | - | 144 | Protein_63 | EAL domain-containing protein | - |
| ECE110019_RS26155 () | 56193..56765 | - | 573 | WP_161953730.1 | transcriptional regulator MrkI | - |
| ECE110019_RS26160 () | 56783..56914 | - | 132 | Protein_65 | PilZ domain-containing protein | - |
| ECE110019_RS26165 () | 56965..57662 | + | 698 | Protein_66 | IS1 family transposase | - |
| ECE110019_RS26170 () | 57859..58209 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| ECE110019_RS26175 () | 58212..59174 | - | 963 | WP_000959874.1 | plasmid segregation protein ParM | - |
| ECE110019_RS26180 () | 59323..59616 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| ECE110019_RS26185 () | 59693..60376 | + | 684 | WP_000085886.1 | DNA methylase | - |
| ECE110019_RS26190 () | 60377..60598 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| ECE110019_RS26195 () | 60612..61046 | + | 435 | WP_000274483.1 | DUF1380 family protein | - |
| ECE110019_RS26200 () | 61091..61861 | + | 771 | WP_001006212.1 | hypothetical protein | - |
| ECE110019_RS27155 () | 61973..62275 | - | 303 | WP_000971634.1 | hypothetical protein | - |
| ECE110019_RS26210 () | 62397..62699 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| ECE110019_RS26215 () | 62746..63168 | + | 423 | WP_000271720.1 | DUF1380 family protein | - |
| ECE110019_RS26220 () | 63165..63356 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| ECE110019_RS26225 () | 63629..63877 | - | 249 | WP_071526484.1 | hypothetical protein | - |
| ECE110019_RS26230 () | 64393..64623 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| ECE110019_RS26235 () | 64675..66036 | + | 1362 | WP_000170708.1 | DUF3560 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|