MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 100586 bp
Accession: NZ_CP034934 Location: 1..100586 Organism: Shigella dysenteriae strain 79-8006 Replicon: plasmid p79-8006
Accession: NZ_CP034934 Location: 1..100586 Organism: Shigella dysenteriae strain 79-8006 Replicon: plasmid p79-8006
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPD85_RS00005 | 5..1132 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| EPD85_RS00015 | 1425..3017 | - | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| EPD85_RS00020 | 3048..3398 | - | 351 | WP_129593018.1 | IS66 family transposase IS682 | Transposase |
| EPD85_RS00025 | 3395..3751 | - | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| EPD85_RS24850 | 3903..4004 | + | 102 | Protein_4 | ATP-binding protein | - |
| EPD85_RS00030 | 4086..4295 | - | 210 | Protein_5 | peptidoglycan-binding protein | - |
| EPD85_RS00035 | 4345..4596 | - | 252 | WP_000433928.1 | transporter | - |
| EPD85_RS00040 | 5048..5332 | + | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EPD85_RS00045 | 5332..5607 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EPD85_RS24615 | 5739..5876 | - | 138 | WP_000766699.1 | hypothetical protein | - |
| EPD85_RS24855 | 6152..6334 | - | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| EPD85_RS00060 | 6337..6904 | - | 568 | Protein_11 | plasmid segregation protein ParM | - |
| EPD85_RS00065 | 6912..8003 | + | 1092 | Protein_12 | IS66 family transposase ISEc49 | Transposase |
| EPD85_RS00070 | 8198..9328 | - | 1131 | WP_050546159.1 | IS91 family transposase | - |
| EPD85_RS00085 | 10700..10972 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| EPD85_RS00090 | 11429..12657 | - | 1229 | Protein_16 | IS3-like element IS2 family transposase | - |
| EPD85_RS00095 | 12901..13119 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EPD85_RS00100 | 13121..13426 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EPD85_RS00105 | 13450..13557 | + | 108 | WP_023592908.1 | IS66 family transposase IS679 | Transposase |
| EPD85_RS00110 | 13819..15456 | + | 1638 | WP_129593020.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| EPD85_RS00115 | 15664..15933 | + | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| EPD85_RS24860 | 15933..16102 | + | 170 | Protein_22 | type II toxin-antitoxin system toxin YacB | - |
| EPD85_RS00120 | 16185..16667 | + | 483 | Protein_23 | Protein kinase OspG | VF |
| EPD85_RS24865 | 17434..17586 | - | 153 | Protein_25 | hypothetical protein | - |
| EPD85_RS00135 | 18069..18911 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| EPD85_RS00140 | 18914..20002 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| EPD85_RS00145 | 20007..20957 | + | 951 | WP_005045525.1 | virulence factor VirK | - |
| EPD85_RS00150 | 21022..21966 | + | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| EPD85_RS00155 | 22120..22791 | - | 672 | Protein_30 | IS630 family transposase IS630 | Transposase |
| EPD85_RS00165 | 23752..25932 | + | 2181 | WP_069661558.1 | type IV conjugative transfer system coupling protein TraD | - |
| EPD85_RS00170 | 25941..26339 | - | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EPD85_RS00175 | 26339..26566 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| EPD85_RS00180 | 26651..31783 | + | 5133 | Protein_35 | Multifunctional conjugation protein TraI | Relaxase |
| EPD85_RS24870 | 31943..32689 | + | 747 | WP_000205722.1 | Multifunctional conjugation protein TraI | Relaxase |
| EPD85_RS00190 | 32744..33304 | + | 561 | WP_005056178.1 | fertility inhibition protein FinO | - |
| EPD85_RS00195 | 33435..33647 | + | 213 | WP_011379083.1 | ANR family transcriptional regulator | - |
| EPD85_RS00200 | 33891..34352 | + | 462 | WP_001233866.1 | thermonuclease family protein | - |
| EPD85_RS00205 | 34398..34607 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| EPD85_RS00210 | 34646..35236 | + | 591 | WP_000766818.1 | DUF2726 domain-containing protein | - |
| EPD85_RS00215 | 35476..35736 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| EPD85_RS00220 | 35960..36034 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EPD85_RS00225 | 36027..36884 | + | 858 | WP_000130973.1 | incFII family plasmid replication initiator RepA | - |
| EPD85_RS00230 | 37868..38191 | - | 324 | Protein_45 | IS110 family transposase IS1663 | Transposase |
| EPD85_RS00235 | 38363..38653 | - | 291 | Protein_46 | IS91 family transposase ISSbo1 | Transposase |
| EPD85_RS00240 | 38720..40062 | + | 1343 | Protein_47 | IS4 family transposase | - |
| EPD85_RS00245 | 40079..40999 | - | 921 | Protein_48 | IS91-like element ISSbo1 family transposase | - |
| EPD85_RS00250 | 41009..41197 | - | 189 | WP_000957863.1 | hypothetical protein | - |
| EPD85_RS00255 | 41305..41559 | - | 255 | Protein_50 | IS3 family transposase IS1203 | Transposase |
| EPD85_RS00260 | 41614..41895 | + | 282 | Protein_51 | transposase domain-containing protein | - |
| EPD85_RS24875 | 41968..42045 | - | 78 | Protein_52 | hypothetical protein | - |
| EPD85_RS00270 | 43409..44863 | + | 1455 | WP_000701106.1 | hypothetical protein | VF |
| EPD85_RS00275 | 45012..45140 | - | 129 | Protein_55 | IS5 family transposase ISSfl7 | Transposase |
| EPD85_RS00280 | 45312..46520 | - | 1209 | WP_046891828.1 | IS91 family transposase ISSbo1 | Transposase |
| EPD85_RS00285 | 46501..46773 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| EPD85_RS00290 | 47045..47347 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EPD85_RS00295 | 47338..47820 | + | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EPD85_RS00300 | 47888..48411 | + | 524 | Protein_60 | transposase | - |
| EPD85_RS00305 | 48454..48792 | - | 339 | Protein_61 | IS3 family transposase IS629 | Transposase |
| EPD85_RS00310 | 48866..50033 | + | 1168 | Protein_62 | IS3 family transposase | - |
| EPD85_RS00315 | 50057..50749 | - | 693 | WP_000625268.1 | hypothetical protein | VF |
| EPD85_RS00320 | 50805..50957 | + | 153 | Protein_64 | IS3 family transposase ISEc17 | Transposase |
| EPD85_RS00325 | 51239..51376 | - | 138 | WP_005026553.1 | hypothetical protein | - |
| EPD85_RS00330 | 52338..53285 | + | 948 | WP_005041436.1 | Outer membrane protease IcsP | VF |
| EPD85_RS00335 | 53847..54219 | - | 373 | Protein_67 | IS3 family transposase IS2 | Transposase |
| EPD85_RS00340 | 54461..55225 | - | 765 | Protein_68 | IS3 family transposase IS2 | Transposase |
| EPD85_RS00345 | 55340..56568 | + | 1229 | WP_134805288.1 | IS3 family transposase IS2 | Transposase |
| EPD85_RS00350 | 56589..57025 | - | 437 | Protein_70 | IS3 family transposase ISEc27 | Transposase |
| EPD85_RS00355 | 57135..57254 | + | 120 | Protein_71 | DUF3440 domain-containing protein | - |
| EPD85_RS00360 | 57504..58370 | + | 867 | WP_001046941.1 | hypothetical protein | VF |
| EPD85_RS00365 | 58698..59438 | + | 741 | WP_000850660.1 | PAP2 family phosphatase PhoN2 | - |
| EPD85_RS25465 | 59511..59633 | + | 123 | WP_000537156.1 | IS3 family transposase IS629 | Transposase |
| EPD85_RS00375 | 60027..60724 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| EPD85_RS24880 | 60739..61145 | - | 407 | Protein_76 | hypothetical protein | VF |
| EPD85_RS00385 | 61130..62196 | - | 1067 | Protein_77 | IS3 family transposase IS2 | Transposase |
| EPD85_RS00390 | 62198..62665 | - | 468 | Protein_78 | IS66 family transposase IS679 | Transposase |
| EPD85_RS24620 | 62682..63367 | - | 686 | Protein_79 | IS3 family transposase ISSfl11 | Transposase |
| EPD85_RS00405 | 63706..63972 | + | 267 | Protein_80 | hypothetical protein | - |
| EPD85_RS00410 | 64057..65766 | - | 1710 | WP_005041841.1 | hypothetical protein | VF |
| EPD85_RS00415 | 66198..66917 | - | 720 | WP_001121865.1 | Phosphothreonine lyase OspF | VF |
| EPD85_RS00420 | 67042..67605 | - | 564 | Protein_83 | ISL3 family transposase ISKox3 | Transposase |
| EPD85_RS00425 | 67589..67847 | + | 259 | Protein_84 | IS1 family transposase | - |
| EPD85_RS00430 | 67956..68534 | - | 579 | WP_000868561.1 | hypothetical protein | - |
| EPD85_RS24885 | 68583..68841 | - | 259 | Protein_86 | integrase core domain-containing protein | - |
| EPD85_RS00435 | 68955..69192 | - | 238 | Protein_87 | IS21 family transposase IS21 | Transposase |
| EPD85_RS00440 | 69379..69808 | - | 430 | Protein_88 | IS91 family transposase IS91 | Transposase |
| EPD85_RS00445 | 69886..70173 | + | 288 | WP_001077959.1 | hypothetical protein | - |
| EPD85_RS24625 | 70204..70485 | + | 282 | Protein_90 | IS66 family transposase ISCro1 | Transposase |
| EPD85_RS00450 | 70442..71844 | - | 1403 | Protein_91 | IS4-like element IS4 family transposase | - |
| EPD85_RS00455 | 71911..72287 | + | 377 | Protein_92 | IS66 family transposase ISCro1 | Transposase |
| EPD85_RS00460 | 72287..72634 | + | 348 | WP_000622995.1 | IS66 family transposase ISCro1 | Transposase |
| EPD85_RS00465 | 72654..73808 | + | 1155 | Protein_94 | IS66 family transposase ISCro1 | Transposase |
| EPD85_RS00470 | 73812..73971 | + | 160 | Protein_95 | IS3 family transposase | - |
| EPD85_RS00475 | 74560..74858 | + | 299 | Protein_96 | IS256 family transposase IS1414 | Transposase |
| EPD85_RS00480 | 74940..75077 | + | 138 | Protein_97 | IS630 family transposase | - |
| EPD85_RS00485 | 75448..76125 | + | 678 | WP_000026472.1 | hypothetical protein | VF |
| EPD85_RS00490 | 76449..76559 | + | 111 | Protein_99 | IS3 family transposase | - |
| EPD85_RS00495 | 76637..76951 | + | 315 | WP_011114726.1 | hypothetical protein | - |
| EPD85_RS00500 | 77233..77799 | + | 567 | WP_024259653.1 | hypothetical protein | VF |
| EPD85_RS00505 | 78061..78183 | - | 123 | Protein_102 | transposase domain-containing protein | - |
| EPD85_RS00510 | 78326..78880 | + | 555 | Protein_103 | IS3 family transposase IS3H | Transposase |
| EPD85_RS00515 | 79220..79580 | + | 361 | Protein_104 | IS1 family transposase | - |
| EPD85_RS00520 | 79667..80678 | + | 1012 | Protein_105 | IS21 family transposase IS100kyp | Transposase |
| EPD85_RS00525 | 80675..81457 | + | 783 | Protein_106 | IS21 family transposase IS100kyp | Transposase |
| EPD85_RS00530 | 81524..81862 | + | 339 | Protein_107 | IS1 family transposase | - |
| EPD85_RS00535 | 81876..82010 | + | 135 | Protein_108 | IS66 family transposase ISEc23 | Transposase |
| EPD85_RS00540 | 82184..83383 | + | 1200 | WP_000200287.1 | AAA family ATPase | - |
| EPD85_RS00545 | 83383..84363 | + | 981 | WP_000431557.1 | ParB family protein | - |
| EPD85_RS00550 | 84619..85104 | + | 486 | WP_000003223.1 | IS110 family transposase ISSde4 | Transposase |
| EPD85_RS00555 | 85131..85310 | - | 180 | Protein_112 | transposase domain-containing protein | - |
| EPD85_RS00560 | 85393..86490 | - | 1098 | Protein_113 | group II intron reverse transcriptase/maturase | - |
| EPD85_RS24895 | 86385..86780 | + | 396 | Protein_114 | hypothetical protein | - |
| EPD85_RS00570 | 87097..87276 | - | 180 | Protein_115 | transposase | - |
| EPD85_RS00580 | 88828..89502 | + | 675 | WP_005031011.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD85_RS00585 | 89499..89663 | + | 165 | Protein_118 | IS66 family transposase ISSfl3 | Transposase |
| EPD85_RS00590 | 89812..90831 | + | 1020 | WP_129592979.1 | IS110 family transposase ISEc11 | Transposase |
| EPD85_RS00595 | 91106..91288 | + | 183 | Protein_120 | IS66 family insertion sequence element accessory protein TnpB | - |
| EPD85_RS00600 | 91308..92909 | + | 1602 | WP_004967149.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD85_RS00605 | 92909..93406 | + | 498 | Protein_122 | IS1 family transposase | - |
| EPD85_RS00610 | 93565..94203 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| EPD85_RS00615 | 94318..94587 | + | 270 | Protein_124 | IS3 family transposase ISEc48 | Transposase |
| EPD85_RS00620 | 94675..95903 | + | 1229 | WP_171764164.1 | IS3 family transposase IS2 | Transposase |
| EPD85_RS00630 | 96151..96433 | + | 283 | Protein_126 | IS110 family transposase | - |
| EPD85_RS00635 | 96563..97690 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| EPD85_RS00645 | 98989..99150 | - | 162 | Protein_129 | IS110 family transposase ISEc11 | Transposase |
| EPD85_RS00650 | 99299..99463 | - | 165 | Protein_130 | IS66 family transposase ISSfl3 | Transposase |
| EPD85_RS00655 | 99460..100134 | - | 675 | WP_046891833.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD85_RS00660 | 100353..100460 | + | 108 | Protein_132 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|