MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94014 bp
Accession: NZ_CP034805 Location: 1..94014 Organism: Escherichia coli strain 2009C-3554 Replicon: plasmid p2009C-3554-2
Accession: NZ_CP034805 Location: 1..94014 Organism: Escherichia coli strain 2009C-3554 Replicon: plasmid p2009C-3554-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A0I22_RS28670 () | 6950..7102 | - | 153 | Protein_1 | IS1 family transposase | - |
| A0I22_RS28675 () | 7099..7219 | - | 121 | Protein_2 | IS21 family transposase ISEc62 | Transposase |
| A0I22_RS28680 () | 7259..7522 | - | 264 | Protein_3 | IS21 family transposase ISEc62 | Transposase |
| A0I22_RS28685 () | 7616..7965 | + | 350 | Protein_4 | IS3 family transposase IS3H | Transposase |
| A0I22_RS28695 () | 8616..9047 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| A0I22_RS28700 () | 9115..11136 | - | 2022 | Protein_6 | hypothetical protein | Relaxase |
| A0I22_RS28705 () | 11270..11428 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 11493..11691 | - | 199 | NuclAT_0 | - | - |
| - () | 11493..11691 | - | 199 | NuclAT_0 | - | - |
| - () | 11493..11691 | - | 199 | NuclAT_0 | - | - |
| - () | 11493..11691 | - | 199 | NuclAT_0 | - | - |
| A0I22_RS28710 () | 11660..12421 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| A0I22_RS28715 () | 12418..12852 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| A0I22_RS28720 () | 12907..14865 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| A0I22_RS28725 () | 14931..15164 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| A0I22_RS28730 () | 15221..15673 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| A0I22_RS29545 () | 15699..15905 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| A0I22_RS28740 () | 15975..16430 | + | 456 | WP_001358896.1 | hypothetical protein | - |
| A0I22_RS28745 () | 16516..17079 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| A0I22_RS28750 () | 17126..18487 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| A0I22_RS28755 () | 18539..18769 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| A0I22_RS29550 () | 19286..19795 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| A0I22_RS28770 () | 19765..19956 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| A0I22_RS28775 () | 19953..20375 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| A0I22_RS28780 () | 20422..20724 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| A0I22_RS29555 () | 21265..22041 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| A0I22_RS28795 () | 22087..22641 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| A0I22_RS28800 () | 22535..22756 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| A0I22_RS28805 () | 22757..23440 | - | 684 | WP_000085945.1 | DNA methylase | - |
| A0I22_RS28815 () | 23517..23822 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| A0I22_RS28820 () | 23826..24728 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| A0I22_RS28825 () | 24805..26529 | - | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| A0I22_RS28850 () | 27829..28800 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| A0I22_RS28855 () | 28800..29966 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| A0I22_RS28865 () | 31867..32205 | - | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| A0I22_RS28870 () | 32167..33380 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| A0I22_RS28880 () | 34103..34909 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| A0I22_RS28885 () | 34910..35215 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A0I22_RS28890 () | 35217..35435 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A0I22_RS28895 () | 35894..36577 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| A0I22_RS28900 () | 36574..37194 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| A0I22_RS28905 () | 37191..37391 | + | 201 | WP_000708307.1 | hypothetical protein | - |
| A0I22_RS28915 () | 37799..38776 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| A0I22_RS28920 () | 39061..39801 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| A0I22_RS28925 () | 39922..40152 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| A0I22_RS29560 () | 40283..40775 | - | 493 | Protein_43 | Transcriptional repressor MprA | VF |
| A0I22_RS28945 () | 40896..42335 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| A0I22_RS28950 () | 42339..44459 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| A0I22_RS28955 () | 44509..47505 | - | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| A0I22_RS28960 () | 47507..48022 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| A0I22_RS28970 () | 48563..49734 | - | 1172 | Protein_48 | IS3 family transposase ISLad1 | Transposase |
| A0I22_RS28980 () | 49913..50314 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| A0I22_RS28985 () | 50406..51239 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| A0I22_RS28990 () | 51297..51809 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| A0I22_RS28995 () | 51796..52968 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| A0I22_RS29000 () | 53007..53984 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| A0I22_RS29005 () | 53981..54580 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| A0I22_RS29010 () | 54577..54924 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| A0I22_RS29015 () | 54939..55493 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| A0I22_RS29020 () | 55490..55924 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| A0I22_RS29025 () | 55955..57178 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| A0I22_RS29030 () | 57180..58685 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| A0I22_RS29035 () | 58685..60652 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| A0I22_RS29040 () | 60653..61528 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| A0I22_RS29045 () | 61615..64311 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| A0I22_RS29055 () | 64759..64845 | + | 87 | Protein_63 | IS3 family transposase ISEhe3 | Transposase |
| A0I22_RS29060 () | 64949..65137 | - | 189 | Protein_64 | hypothetical protein | - |
| A0I22_RS29065 () | 65190..66188 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| A0I22_RS29070 () | 66262..67983 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| A0I22_RS29075 () | 68073..69179 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| A0I22_RS29080 () | 69179..70000 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| A0I22_RS29090 () | 71442..71923 | + | 482 | Protein_69 | IS1 family transposase IS1N | Transposase |
| A0I22_RS29095 () | 72179..76081 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| A0I22_RS29105 () | 76262..77250 | - | 989 | Protein_71 | IS3 family transposase IS629 | Transposase |
| A0I22_RS29110 () | 77307..77696 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| A0I22_RS29115 () | 77740..79950 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| A0I22_RS29120 () | 80127..80312 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| A0I22_RS29125 () | 80312..80728 | + | 417 | Protein_75 | IS91 family transposase | - |
| A0I22_RS29130 () | 80728..81294 | + | 567 | Protein_76 | IS3 family transposase ISSd1 | Transposase |
| A0I22_RS29135 () | 81338..81553 | + | 216 | Protein_77 | transposase | - |
| A0I22_RS29140 () | 81653..81859 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| A0I22_RS29145 () | 81954..82229 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A0I22_RS29150 () | 82229..82513 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| A0I22_RS29165 () | 83425..84282 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| A0I22_RS29170 () | 84275..84349 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| A0I22_RS29180 () | 84585..84839 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| A0I22_RS29185 () | 85079..85417 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| A0I22_RS29190 () | 85455..85664 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| A0I22_RS29195 () | 85710..86171 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
| A0I22_RS29200 () | 86416..86628 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| A0I22_RS29205 () | 86761..87321 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| A0I22_RS29210 () | 87424..88284 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| A0I22_RS29215 () | 88343..89089 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| A0I22_RS29220 () | 89109..90497 | - | 1389 | Protein_91 | Multifunctional conjugation protein TraI | Relaxase |
| A0I22_RS29225 () | 90554..90805 | + | 252 | Protein_92 | IS3 family transposase IS1203 | Transposase |
| A0I22_RS29230 () | 90812..90982 | + | 171 | Protein_93 | IS3 family transposase IS1203 | Transposase |
| A0I22_RS29235 () | 91050..91274 | - | 225 | Protein_94 | IS3 family transposase IS3H | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|