MGE detailed information
MGE type: Prophage MGE length: 44597 bp
Accession: NZ_CP034803 Location: 26956..71552 Organism: Escherichia coli strain 2009C-3554 Replicon: chromosome
Accession: NZ_CP034803 Location: 26956..71552 Organism: Escherichia coli strain 2009C-3554 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A0I22_RS00125 () | 23205..25631 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| A0I22_RS00130 () | 25830..26135 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| A0I22_RS00135 () | 26243..26953 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| A0I22_RS00140 () | 26956..27516 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| A0I22_RS00145 () | 27551..27892 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| A0I22_RS00150 () | 28027..28353 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| A0I22_RS00160 () | 28625..29307 | - | 683 | Protein_31 | DUF3596 domain-containing protein | - |
| A0I22_RS00165 () | 29342..29593 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| A0I22_RS00170 () | 29666..32137 | - | 2472 | WP_000048458.1 | exonuclease | - |
| A0I22_RS00175 () | 32230..32421 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| A0I22_RS00180 () | 32418..32606 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| A0I22_RS00190 () | 33175..33393 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| A0I22_RS00195 () | 33465..33764 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| A0I22_RS00200 () | 34117..34395 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A0I22_RS00205 () | 34397..34588 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| A0I22_RS00210 () | 34609..34980 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| A0I22_RS00215 () | 35078..35380 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| A0I22_RS00220 () | 35377..35802 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| A0I22_RS00225 () | 35825..36787 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| A0I22_RS00230 () | 36794..37534 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| A0I22_RS00235 () | 37560..38329 | + | 770 | Protein_45 | DUF1627 domain-containing protein | - |
| A0I22_RS00240 () | 38345..38740 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| A0I22_RS00245 () | 38797..39381 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| A0I22_RS00250 () | 39497..39601 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| A0I22_RS00255 () | 39847..40002 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| A0I22_RS00260 () | 40170..40448 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| A0I22_RS00265 () | 40450..41499 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| A0I22_RS00270 () | 41512..41871 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A0I22_RS00275 () | 41868..42557 | + | 690 | WP_001059381.1 | antiterminator | - |
| A0I22_RS00300 () | 43197..43625 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| A0I22_RS00305 () | 43622..43877 | + | 256 | Protein_55 | DUF3927 family protein | - |
| A0I22_RS00310 () | 44104..45954 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| A0I22_RS00315 () | 46394..46609 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| A0I22_RS00320 () | 46614..46958 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| A0I22_RS00325 () | 47009..47542 | + | 534 | WP_000992137.1 | lysozyme | - |
| A0I22_RS00330 () | 47813..48382 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| A0I22_RS00335 () | 48382..48528 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| A0I22_RS00345 () | 48756..48941 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| A0I22_RS00350 () | 49366..49593 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| A0I22_RS00355 () | 49635..50000 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| A0I22_RS00365 () | 50290..50853 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| A0I22_RS00370 () | 50850..52511 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| A0I22_RS00375 () | 52575..54512 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| A0I22_RS00380 () | 54557..54778 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| A0I22_RS00385 () | 54724..57308 | + | 2585 | Protein_69 | phage portal protein | - |
| A0I22_RS00390 () | 57305..57631 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| A0I22_RS00395 () | 57641..57991 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| A0I22_RS00400 () | 57988..58434 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| A0I22_RS00405 () | 58431..58775 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| A0I22_RS00410 () | 58844..59560 | + | 717 | WP_001275479.1 | immunoglobulin domain-containing protein | - |
| A0I22_RS00415 () | 59566..59940 | + | 375 | WP_001030060.1 | phage tail assembly chaperone | - |
| A0I22_RS00420 () | 60036..60245 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| A0I22_RS00425 () | 60297..63146 | + | 2850 | WP_089158663.1 | phage tail tape measure protein | - |
| A0I22_RS00430 () | 63139..63480 | + | 342 | WP_000807954.1 | phage tail protein | - |
| A0I22_RS00435 () | 63480..64178 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| A0I22_RS00440 () | 64189..64932 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| A0I22_RS00445 () | 64878..65510 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| A0I22_RS00450 () | 65852..67056 | + | 1205 | Protein_82 | phage tail protein | - |
| A0I22_RS29395 () | 67147..68643 | + | 1497 | Protein_83 | DUF1983 domain-containing protein | - |
| A0I22_RS29400 () | 68671..69326 | + | 656 | Protein_84 | DUF3672 domain-containing protein | - |
| A0I22_RS00460 () | 69394..69993 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| A0I22_RS00465 () | 70058..71281 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A0I22_RS00470 () | 71283..71552 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| A0I22_RS00475 () | 71666..72241 | + | 576 | Protein_88 | DUF1076 domain-containing protein | - |
| A0I22_RS00485 () | 72952..73602 | + | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| A0I22_RS00490 () | 73752..74147 | + | 396 | Protein_90 | IS256 family transposase | - |
| A0I22_RS00495 () | 74185..75723 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| A0I22_RS00500 () | 75773..76120 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A0I22_RS00505 () | 76117..76497 | - | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.008 |