MGE detailed information
MGE type: Prophage MGE length: 100688 bp
Accession: NZ_CP034801 Location: 4698564..4799251 Organism: Escherichia coli strain 2010C-3142 Replicon: chromosome
Accession: NZ_CP034801 Location: 4698564..4799251 Organism: Escherichia coli strain 2010C-3142 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR10_RS23470 () | 4695939..4698365 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| AYR10_RS23475 () | 4698564..4698869 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| AYR10_RS23480 () | 4698977..4699687 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| AYR10_RS23485 () | 4699690..4700250 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AYR10_RS23490 () | 4700285..4700626 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| AYR10_RS23495 () | 4700761..4701087 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| AYR10_RS23505 () | 4701857..4702041 | - | 185 | Protein_4465 | DUF3596 domain-containing protein | - |
| AYR10_RS23510 () | 4702076..4702327 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| AYR10_RS23515 () | 4702400..4703794 | - | 1395 | Protein_4467 | 3'-5' exoribonuclease | - |
| AYR10_RS23525 () | 4705099..4706184 | - | 1086 | Protein_4469 | exonuclease | - |
| AYR10_RS23530 () | 4706277..4706468 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| AYR10_RS23535 () | 4706465..4706653 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| AYR10_RS23545 () | 4707222..4707440 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| AYR10_RS23550 () | 4707512..4707811 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| AYR10_RS23555 () | 4708164..4708442 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AYR10_RS23560 () | 4708444..4708635 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| AYR10_RS23565 () | 4708656..4709027 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| AYR10_RS23570 () | 4709125..4709427 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| AYR10_RS23575 () | 4709424..4709849 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| AYR10_RS23580 () | 4709872..4710834 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| AYR10_RS23585 () | 4710841..4711581 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| AYR10_RS23590 () | 4711607..4712376 | + | 770 | Protein_4481 | DUF1627 domain-containing protein | - |
| AYR10_RS23595 () | 4712392..4712787 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| AYR10_RS23600 () | 4712844..4713428 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| AYR10_RS23605 () | 4713544..4713648 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| AYR10_RS23610 () | 4713894..4714049 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| AYR10_RS23615 () | 4714217..4714495 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| AYR10_RS23620 () | 4714497..4715546 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| AYR10_RS23625 () | 4715559..4715918 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AYR10_RS23630 () | 4715915..4716604 | + | 690 | WP_001059381.1 | antiterminator | - |
| AYR10_RS23655 () | 4717243..4717671 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| AYR10_RS23660 () | 4717668..4717923 | + | 256 | Protein_4491 | DUF3927 family protein | - |
| AYR10_RS23665 () | 4718150..4720000 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| AYR10_RS23670 () | 4720440..4720655 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| AYR10_RS23675 () | 4720660..4721004 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| AYR10_RS23680 () | 4721055..4721588 | + | 534 | WP_000992137.1 | lysozyme | - |
| AYR10_RS23685 () | 4721859..4722428 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| AYR10_RS23690 () | 4722428..4722544 | + | 117 | WP_000539789.1 | hypothetical protein | - |
| AYR10_RS23700 () | 4722802..4722987 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| AYR10_RS23705 () | 4723412..4723639 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| AYR10_RS23710 () | 4723681..4724046 | + | 366 | WP_000279796.1 | HNH endonuclease | - |
| AYR10_RS23715 () | 4724339..4724902 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| AYR10_RS23720 () | 4724899..4726560 | + | 1662 | WP_001301438.1 | terminase large subunit | - |
| AYR10_RS23725 () | 4726624..4728561 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| AYR10_RS23730 () | 4728606..4728827 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| AYR10_RS23735 () | 4728773..4731352 | + | 2580 | WP_000267295.1 | phage portal protein | - |
| AYR10_RS23740 () | 4731355..4731681 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| AYR10_RS23745 () | 4731691..4732041 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| AYR10_RS23750 () | 4732038..4732484 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| AYR10_RS23755 () | 4732481..4732825 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| AYR10_RS23760 () | 4732891..4733607 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| AYR10_RS23765 () | 4733622..4733996 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| AYR10_RS23770 () | 4734092..4734301 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| AYR10_RS23775 () | 4734349..4737591 | + | 3243 | WP_000212818.1 | phage tail tape measure protein | - |
| AYR10_RS23780 () | 4737584..4737925 | + | 342 | WP_000807954.1 | phage tail protein | - |
| AYR10_RS23785 () | 4737925..4738362 | + | 438 | WP_001179509.1 | phage minor tail protein L | - |
| AYR10_RS23790 () | 4738550..4742028 | + | 3479 | Protein_4516 | host specificity protein J | - |
| AYR10_RS23800 () | 4742096..4742695 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| AYR10_RS23805 () | 4742760..4743983 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AYR10_RS23810 () | 4743985..4744254 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| AYR10_RS23815 () | 4744368..4744943 | + | 576 | WP_001131642.1 | hypothetical protein | VF |
| AYR10_RS23825 () | 4745654..4746304 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| AYR10_RS23830 () | 4746454..4746849 | + | 396 | Protein_4522 | IS256 family transposase ISEic2 | Transposase |
| AYR10_RS23835 () | 4746887..4748425 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| AYR10_RS23840 () | 4748475..4748822 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| AYR10_RS23845 () | 4748819..4749199 | - | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| AYR10_RS23850 () | 4749294..4750112 | + | 819 | Protein_4526 | IS256 family transposase IS1414 | Transposase |
| AYR10_RS23855 () | 4750162..4750404 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| AYR10_RS23860 () | 4750582..4751133 | - | 552 | Protein_4528 | hypothetical protein ; Integrase | Integrase |
| AYR10_RS23865 () | 4751121..4752359 | - | 1239 | Protein_4529 | exonuclease | - |
| AYR10_RS23870 () | 4752452..4752640 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| AYR10_RS23875 () | 4752637..4752825 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| AYR10_RS23885 () | 4753390..4753599 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| AYR10_RS23890 () | 4753600..4754238 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| AYR10_RS23895 () | 4754250..4754402 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| AYR10_RS23900 () | 4754695..4755033 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| AYR10_RS23905 () | 4755425..4755667 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| AYR10_RS23910 () | 4755651..4756076 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| AYR10_RS23915 () | 4756145..4756606 | + | 462 | Protein_4538 | hypothetical protein | - |
| AYR10_RS23920 () | 4756665..4757878 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| AYR10_RS23925 () | 4757875..4758501 | + | 627 | WP_127821357.1 | prepilin peptidase | - |
| AYR10_RS23930 () | 4758494..4758955 | + | 462 | WP_000139447.1 | replication protein | - |
| AYR10_RS23935 () | 4758989..4759705 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| AYR10_RS23940 () | 4759738..4760019 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| AYR10_RS23945 () | 4760016..4760243 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| AYR10_RS23950 () | 4760236..4760547 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| AYR10_RS23955 () | 4760675..4760893 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| AYR10_RS23960 () | 4760895..4761452 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 4761673..4761731 | - | 59 | - | - | Antitoxin Detail |
| AYR10_RS23965 () | 4761743..4761898 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| AYR10_RS23970 () | 4762018..4762362 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| AYR10_RS23975 () | 4762484..4762756 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| AYR10_RS23980 () | 4762758..4763807 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| AYR10_RS23985 () | 4763820..4764125 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AYR10_RS23990 () | 4764188..4764742 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| AYR10_RS23995 () | 4764967..4765164 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| AYR10_RS24000 () | 4765300..4766013 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| AYR10_RS24015 () | 4766464..4766895 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| AYR10_RS24020 () | 4766892..4767147 | + | 256 | Protein_4557 | DUF3927 family protein | - |
| AYR10_RS24025 () | 4767373..4769223 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| AYR10_RS24030 () | 4769662..4769877 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| AYR10_RS24035 () | 4769882..4770289 | + | 408 | WP_000731239.1 | YdfR family protein | - |
| AYR10_RS24040 () | 4770192..4770788 | + | 597 | Protein_4561 | phage major capsid protein | - |
| AYR10_RS24045 () | 4770833..4771054 | + | 222 | WP_001063023.1 | hypothetical protein | - |
| AYR10_RS24050 () | 4771000..4773098 | + | 2099 | Protein_4563 | phage portal protein | - |
| AYR10_RS24055 () | 4773095..4773421 | + | 327 | WP_000126026.1 | head-tail connector protein | - |
| AYR10_RS24060 () | 4773431..4773781 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| AYR10_RS24065 () | 4773778..4774224 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| AYR10_RS24070 () | 4774221..4774565 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| AYR10_RS24075 () | 4774624..4775340 | + | 717 | WP_001275508.1 | tail protein | - |
| AYR10_RS24080 () | 4775346..4775720 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| AYR10_RS24085 () | 4775816..4776025 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| AYR10_RS24090 () | 4776077..4779319 | + | 3243 | WP_000212925.1 | phage tail tape measure protein | - |
| AYR10_RS24095 () | 4779312..4779653 | + | 342 | WP_000807954.1 | phage tail protein | - |
| AYR10_RS24100 () | 4779653..4780351 | + | 699 | WP_001179510.1 | phage minor tail protein L | - |
| AYR10_RS24105 () | 4780362..4781105 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| AYR10_RS24110 () | 4781051..4781683 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| AYR10_RS24115 () | 4782025..4783536 | + | 1512 | Protein_4576 | host specificity protein J | - |
| AYR10_RS24125 () | 4783536..4786103 | + | 2568 | Protein_4577 | host specificity protein J | - |
| AYR10_RS24130 () | 4786171..4786770 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| AYR10_RS24135 () | 4786835..4788148 | + | 1314 | WP_000268848.1 | ISNCY family transposase KIS | Transposase |
| AYR10_RS24140 () | 4788150..4788419 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| AYR10_RS24145 () | 4788533..4789108 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| AYR10_RS24150 () | 4789181..4789810 | + | 630 | WP_001303500.1 | hypothetical protein | VF |
| AYR10_RS24155 () | 4789892..4790533 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| AYR10_RS24165 () | 4790695..4790937 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| AYR10_RS24170 () | 4791069..4792352 | + | 1284 | Protein_4585 | MHS family MFS transporter YdfJ | - |
| AYR10_RS24175 () | 4792441..4793901 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| AYR10_RS24180 () | 4793937..4794140 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AYR10_RS24185 () | 4794317..4795003 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| AYR10_RS24190 () | 4795092..4795838 | - | 747 | WP_000636568.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| AYR10_RS24195 () | 4795975..4798020 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| AYR10_RS24200 () | 4798065..4798583 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| AYR10_RS24205 () | 4798859..4799251 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| AYR10_RS24210 () | 4799506..4800396 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| AYR10_RS28970 () | 4800511..4800615 | - | 105 | WP_211180496.1 | protein MgtT | - |
| AYR10_RS24215 () | 4800615..4800710 | - | 96 | WP_000901365.1 | protein MgtS | - |
| AYR10_RS24220 () | 4800818..4801789 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| AYR10_RS24225 () | 4801884..4802279 | + | 396 | WP_001271101.1 | rhodanese | - |
| AYR10_RS24230 () | 4802320..4803507 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|