MGE detailed information
MGE type: Mobilizable plasmid MGE length: 61553 bp
Accession: NZ_CP034400 Location: 1..61553 Organism: Escherichia coli strain CRE1 Replicon: plasmid pCRE1.3
Accession: NZ_CP034400 Location: 1..61553 Organism: Escherichia coli strain CRE1 Replicon: plasmid pCRE1.3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJC48_RS25725 () | 1282..2337 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| EJC48_RS25730 () | 2356..3495 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| EJC48_RS25735 () | 3485..4186 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| EJC48_RS25740 () | 4252..4986 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| EJC48_RS25750 () | 5152..7509 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| EJC48_RS25755 () | 7515..7835 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| EJC48_RS25760 () | 7906..8094 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| EJC48_RS25765 () | 8196..8780 | - | 585 | WP_129484133.1 | Type IV secretion system protein virB1 | VF |
| EJC48_RS25770 () | 8801..9199 | - | 399 | WP_001153665.1 | hypothetical protein | - |
| EJC48_RS25775 () | 9318..9755 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| EJC48_RS25780 () | 9761..10996 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| EJC48_RS25785 () | 10999..11298 | - | 300 | WP_000835764.1 | IncN plasmid KikA protein | - |
| EJC48_RS25790 () | 11366..11647 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EJC48_RS25795 () | 11637..11888 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| EJC48_RS25800 () | 11988..12623 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| EJC48_RS25805 () | 12696..12983 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| EJC48_RS25810 () | 12996..13250 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| EJC48_RS25815 () | 13252..13893 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| EJC48_RS25820 () | 13899..14894 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| EJC48_RS25825 () | 14898..15155 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| EJC48_RS25830 () | 15152..15454 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| EJC48_RS25835 () | 15435..15692 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| EJC48_RS25840 () | 15725..16171 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| EJC48_RS26350 () | 16182..16352 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| EJC48_RS25845 () | 16356..16799 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| EJC48_RS25855 () | 17173..18126 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| EJC48_RS26355 () | 18153..18329 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| EJC48_RS25860 () | 18322..18537 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| EJC48_RS25865 () | 18530..19036 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| EJC48_RS25870 () | 20122..21150 | + | 1029 | WP_001175213.1 | replication initiation protein | - |
| EJC48_RS25885 () | 22748..22909 | + | 162 | WP_000775236.1 | type I toxin-antitoxin system Hok family toxin | - |
| EJC48_RS25890 () | 23059..23655 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| EJC48_RS26505 () | 23673..23957 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| EJC48_RS25900 () | 24031..24696 | - | 666 | WP_000532148.1 | P-loop NTPase | - |
| EJC48_RS25910 () | 25294..25623 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| EJC48_RS25915 () | 26205..26528 | + | 324 | WP_000427403.1 | hypothetical protein | - |
| EJC48_RS25920 () | 26569..26778 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| EJC48_RS25925 () | 26875..27099 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| EJC48_RS25930 () | 27151..27411 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| EJC48_RS25935 () | 27401..27652 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| EJC48_RS25950 () | 28202..28480 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| EJC48_RS25955 () | 28900..29166 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| EJC48_RS25960 () | 29273..29455 | - | 183 | WP_001481829.1 | hypothetical protein | - |
| EJC48_RS25965 () | 30013..30195 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| EJC48_RS25970 () | 30220..30657 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| EJC48_RS25975 () | 30788..31114 | - | 327 | WP_063078684.1 | hypothetical protein | - |
| EJC48_RS25980 () | 31134..31841 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| EJC48_RS25985 () | 31843..32595 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| EJC48_RS25990 () | 32613..33014 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| EJC48_RS25995 () | 33382..33723 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| EJC48_RS26000 () | 33720..38033 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| EJC48_RS26005 () | 38158..39129 | + | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| EJC48_RS26010 () | 39325..40950 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| EJC48_RS26015 () | 41022..41744 | + | 723 | WP_039003037.1 | PAP2 family protein | - |
| EJC48_RS26365 () | 41755..42195 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| EJC48_RS26025 () | 42541..42747 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| EJC48_RS26030 () | 42816..44981 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| EJC48_RS26035 () | 44986..45561 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| EJC48_RS26040 () | 45731..47407 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| EJC48_RS26045 () | 47502..48017 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| EJC48_RS26050 () | 48064..48717 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| EJC48_RS26055 () | 48729..49853 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| EJC48_RS26370 () | 50154..50404 | + | 251 | Protein_63 | shufflon protein B | - |
| EJC48_RS26075 () | 50950..52322 | - | 1373 | Protein_64 | hypothetical protein | VF |
| EJC48_RS26080 () | 52335..52970 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| EJC48_RS26085 () | 52974..53456 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| EJC48_RS26090 () | 53522..54079 | - | 558 | WP_000095048.1 | hypothetical protein | - |
| EJC48_RS26095 () | 54124..55233 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EJC48_RS26100 () | 55224..56762 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| EJC48_RS26105 () | 56787..57281 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| EJC48_RS26110 () | 57265..58587 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| EJC48_RS26115 () | 58626..60269 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| EJC48_RS26120 () | 60262..60798 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|