MGE detailed information
MGE type: Prophage MGE length: 130644 bp
Accession: NZ_CP034363 Location: 1179950..1310593 Organism: Pantoea sp. CCBC3-3-1 Replicon: chromosome
Accession: NZ_CP034363 Location: 1179950..1310593 Organism: Pantoea sp. CCBC3-3-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHV07_RS05340 () | 1175270..1176748 | - | 1479 | WP_147195787.1 | muropeptide MFS transporter AmpG | - |
| EHV07_RS05345 () | 1176792..1177370 | - | 579 | WP_147195789.1 | lipoprotein | - |
| EHV07_RS05350 () | 1177670..1177984 | + | 315 | WP_147195791.1 | transcriptional regulator BolA | - |
| EHV07_RS05355 () | 1178309..1179613 | + | 1305 | WP_147195793.1 | trigger factor | - |
| EHV07_RS05360 () | 1179950..1180573 | + | 624 | WP_147195795.1 | hypothetical protein | VF |
| EHV07_RS05365 () | 1180657..1181931 | + | 1275 | WP_147195797.1 | ATP-dependent protease ATP-binding subunit ClpX | - |
| EHV07_RS05370 () | 1182052..1182639 | - | 588 | WP_147195799.1 | hypothetical protein | VF |
| EHV07_RS05375 () | 1182947..1184221 | + | 1275 | WP_147195801.1 | ATP-dependent protease ATP-binding subunit ClpX | - |
| EHV07_RS05380 () | 1184413..1186767 | + | 2355 | WP_147195804.1 | endopeptidase La | - |
| EHV07_RS05385 () | 1186989..1187261 | + | 273 | WP_147195806.1 | DNA-binding protein HU-beta | - |
| EHV07_RS05390 () | 1187468..1189339 | + | 1872 | WP_147195808.1 | peptidylprolyl isomerase | - |
| EHV07_RS05395 () | 1189530..1189820 | + | 291 | WP_147200535.1 | helix-hairpin-helix domain-containing protein | - |
| EHV07_RS05400 () | 1189929..1190330 | + | 402 | WP_147195810.1 | YbgC/FadM family acyl-CoA thioesterase | - |
| EHV07_RS05405 () | 1190322..1191017 | - | 696 | WP_147195812.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| EHV07_RS05410 () | 1191478..1191909 | + | 432 | WP_147195814.1 | Lrp/AsnC family transcriptional regulator | - |
| EHV07_RS05415 () | 1191957..1193732 | + | 1776 | WP_147195818.1 | SmdA family multidrug ABC transporter permease/ATP-binding protein | - |
| EHV07_RS05420 () | 1193719..1195488 | + | 1770 | WP_147195820.1 | SmdB family multidrug efflux ABC transporter permease/ATP-binding protein | - |
| EHV07_RS05425 () | 1195753..1196091 | + | 339 | WP_007886947.1 | P-II family nitrogen regulator | - |
| EHV07_RS05430 () | 1196127..1197416 | + | 1290 | WP_147195823.1 | ammonium transporter AmtB | - |
| EHV07_RS05435 () | 1197482..1198339 | - | 858 | WP_147195825.1 | acyl-CoA thioesterase II | - |
| EHV07_RS05440 () | 1198550..1199107 | + | 558 | WP_147195826.1 | YbaY family lipoprotein | - |
| EHV07_RS05445 () | 1199148..1199459 | - | 312 | WP_168199671.1 | MGMT family protein | - |
| EHV07_RS05455 () | 1199857..1200075 | - | 219 | WP_147195830.1 | hemolysin expression modulator Hha | Toxin Detail |
| EHV07_RS05460 () | 1200105..1200485 | - | 381 | WP_147195832.1 | Hha toxicity modulator TomB | Antitoxin Detail |
| EHV07_RS05465 () | 1200629..1200982 | - | 354 | WP_147195834.1 | hypothetical protein | - |
| EHV07_RS05470 () | 1201398..1202078 | + | 681 | WP_147195835.1 | hypothetical protein | VF |
| EHV07_RS05475 () | 1202075..1202950 | + | 876 | WP_147195836.1 | hypothetical protein | VF |
| EHV07_RS05480 () | 1202947..1203825 | + | 879 | WP_147195837.1 | hypothetical protein | VF |
| EHV07_RS05485 () | 1203883..1204023 | - | 141 | WP_147195839.1 | type B 50S ribosomal protein L36 | - |
| EHV07_RS05490 () | 1204033..1204284 | - | 252 | WP_147195841.1 | type B 50S ribosomal protein L31 | - |
| EHV07_RS05495 () | 1204476..1207625 | - | 3150 | WP_147195843.1 | hypothetical protein | VF |
| EHV07_RS05500 () | 1207643..1208827 | - | 1185 | WP_147195845.1 | hypothetical protein | VF |
| EHV07_RS05505 () | 1208969..1209610 | + | 642 | WP_147195847.1 | hypothetical protein | VF |
| EHV07_RS05510 () | 1209607..1209774 | - | 168 | WP_147195849.1 | pleiotropic regulatory protein RsmS | - |
| EHV07_RS05515 () | 1209808..1210053 | - | 246 | WP_147195851.1 | hypothetical protein | - |
| EHV07_RS05520 () | 1210120..1210650 | - | 531 | WP_147195853.1 | primosomal replication protein | - |
| EHV07_RS05525 () | 1210712..1211089 | + | 378 | WP_147195855.1 | DUF454 family protein | - |
| EHV07_RS05530 () | 1211246..1211797 | + | 552 | WP_147195857.1 | adenine phosphoribosyltransferase | - |
| EHV07_RS24465 () | 1211875..1215438 | - | 3564 | WP_168199596.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| EHV07_RS05540 () | 1215923..1217839 | + | 1917 | WP_147195859.1 | DNA polymerase III subunit gamma/tau | - |
| EHV07_RS05545 () | 1217882..1218211 | + | 330 | WP_147195861.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EHV07_RS05550 () | 1218211..1218816 | + | 606 | WP_147195863.1 | recombination mediator RecR | - |
| EHV07_RS05555 () | 1218912..1220786 | + | 1875 | WP_147195865.1 | molecular chaperone HtpG | - |
| EHV07_RS05560 () | 1221286..1221930 | + | 645 | WP_147195867.1 | adenylate kinase | - |
| EHV07_RS05565 () | 1222046..1223008 | + | 963 | WP_147195869.1 | ferrochelatase | - |
| EHV07_RS05570 () | 1223086..1224390 | + | 1305 | WP_147195871.1 | inosine/guanosine kinase | - |
| EHV07_RS05575 () | 1224409..1226091 | - | 1683 | WP_147195873.1 | Kef family K(+) transporter | - |
| EHV07_RS05580 () | 1226526..1228238 | + | 1713 | WP_147200536.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| EHV07_RS05585 () | 1228275..1228718 | - | 444 | WP_147195875.1 | multidrug/biocide efflux PACE transporter | - |
| EHV07_RS05590 () | 1228805..1229674 | + | 870 | WP_147195877.1 | hypothetical protein | VF |
| EHV07_RS05595 () | 1229688..1230167 | - | 480 | WP_147195879.1 | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK | - |
| EHV07_RS05600 () | 1230349..1231149 | - | 801 | WP_147195881.1 | TraB/GumN family protein | - |
| EHV07_RS05605 () | 1231221..1233719 | - | 2499 | WP_147195883.1 | copper-exporting P-type ATPase CopA | - |
| EHV07_RS05610 () | 1233863..1234273 | + | 411 | WP_147195885.1 | Cu(I)-responsive transcriptional regulator | - |
| EHV07_RS05615 () | 1234316..1234771 | - | 456 | WP_147195887.1 | NfeD family protein | - |
| EHV07_RS05620 () | 1234771..1235682 | - | 912 | WP_147195889.1 | SPFH/Band 7/PHB domain protein | - |
| EHV07_RS05625 () | 1235738..1236595 | - | 858 | WP_147195891.1 | co-chaperone YbbN | - |
| EHV07_RS05630 () | 1236649..1237446 | - | 798 | WP_147195893.1 | SDR family oxidoreductase | - |
| EHV07_RS05635 () | 1237451..1238098 | - | 648 | WP_147195895.1 | multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 | - |
| EHV07_RS05640 () | 1238069..1238755 | + | 687 | WP_147195898.1 | hypothetical protein | VF |
| EHV07_RS05645 () | 1238752..1241169 | + | 2418 | WP_147195900.1 | ABC transporter permease | - |
| EHV07_RS05650 () | 1241328..1241987 | + | 660 | WP_147195902.1 | acyl-homoserine-lactone synthase | - |
| EHV07_RS05655 () | 1241949..1242692 | - | 744 | WP_147200537.1 | LuxR family transcriptional regulator | - |
| EHV07_RS05660 () | 1243114..1244193 | - | 1080 | WP_147195904.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| EHV07_RS05665 () | 1244190..1244699 | - | 510 | WP_147195906.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| EHV07_RS05670 () | 1244846..1245571 | - | 726 | WP_147195908.1 | hypothetical protein | VF |
| EHV07_RS05675 () | 1245571..1246065 | - | 495 | WP_147195910.1 | hypothetical protein | VF |
| EHV07_RS05680 () | 1246299..1247687 | + | 1389 | WP_147195912.1 | cysteine--tRNA ligase | - |
| EHV07_RS05685 () | 1247793..1248005 | - | 213 | WP_147195915.1 | ribosome-associated protein YbcJ | - |
| EHV07_RS05690 () | 1248005..1248871 | - | 867 | WP_147195918.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| EHV07_RS05700 () | 1249146..1250309 | - | 1164 | WP_147195921.1 | hypothetical protein ; Integrase | Integrase |
| EHV07_RS05705 () | 1250204..1250533 | - | 330 | WP_147195924.1 | helix-turn-helix domain-containing protein | - |
| EHV07_RS05710 () | 1250572..1251120 | - | 549 | WP_147195926.1 | hypothetical protein | - |
| EHV07_RS05720 () | 1251342..1251551 | - | 210 | WP_147195930.1 | hypothetical protein | - |
| EHV07_RS05725 () | 1251621..1251863 | - | 243 | WP_147195932.1 | hypothetical protein | - |
| EHV07_RS05730 () | 1251848..1252095 | - | 248 | Protein_1113 | DNA polymerase III subunit theta | - |
| EHV07_RS05735 () | 1252101..1252325 | - | 225 | WP_147195934.1 | hypothetical protein | - |
| EHV07_RS05740 () | 1252440..1253297 | - | 858 | WP_147195936.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| EHV07_RS05745 () | 1253337..1254017 | - | 681 | WP_147200538.1 | YqaJ viral recombinase family protein | - |
| EHV07_RS05750 () | 1254017..1254952 | - | 936 | WP_147195938.1 | recombinase RecT | - |
| EHV07_RS05755 () | 1254952..1255266 | - | 315 | WP_147195940.1 | hypothetical protein | - |
| EHV07_RS05760 () | 1255370..1255501 | - | 132 | WP_147195942.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| EHV07_RS05765 () | 1255631..1255918 | + | 288 | WP_147195944.1 | hypothetical protein | - |
| EHV07_RS05770 () | 1255911..1256183 | - | 273 | WP_147195946.1 | hypothetical protein | - |
| EHV07_RS05775 () | 1256857..1257099 | - | 243 | WP_147195948.1 | hypothetical protein | - |
| EHV07_RS05780 () | 1257478..1258107 | - | 630 | WP_147195950.1 | LexA family transcriptional regulator | - |
| EHV07_RS05785 () | 1258207..1258422 | + | 216 | WP_147195952.1 | helix-turn-helix transcriptional regulator | - |
| EHV07_RS05790 () | 1258532..1258807 | + | 276 | WP_147195953.1 | lambda phage CII family protein | - |
| EHV07_RS05795 () | 1258842..1259672 | + | 831 | WP_147195955.1 | DNA-binding protein | - |
| EHV07_RS05800 () | 1259669..1260487 | + | 819 | WP_147195957.1 | replication protein | - |
| EHV07_RS05805 () | 1260484..1261245 | + | 762 | WP_147195959.1 | replication protein | - |
| EHV07_RS05810 () | 1261306..1261680 | + | 375 | WP_147195961.1 | DUF4884 domain-containing protein | - |
| EHV07_RS05815 () | 1261677..1261955 | + | 279 | WP_147195963.1 | hypothetical protein | - |
| EHV07_RS05820 () | 1261952..1262131 | + | 180 | WP_147195965.1 | hypothetical protein | - |
| EHV07_RS05825 () | 1262135..1262581 | + | 447 | WP_147195969.1 | hypothetical protein | - |
| EHV07_RS05830 () | 1262581..1262955 | + | 375 | WP_147200539.1 | ASCH domain-containing protein | - |
| EHV07_RS05835 () | 1262964..1263551 | + | 588 | WP_147195973.1 | S-adenosylmethionine-binding protein | - |
| EHV07_RS05840 () | 1263548..1263835 | + | 288 | WP_147195975.1 | hypothetical protein | - |
| EHV07_RS05845 () | 1263819..1263989 | + | 171 | WP_147195978.1 | NinE family protein | - |
| EHV07_RS05850 () | 1263986..1264183 | + | 198 | WP_168199597.1 | hypothetical protein | - |
| EHV07_RS05855 () | 1264378..1264953 | + | 576 | WP_147195982.1 | recombination protein NinG | - |
| EHV07_RS05860 () | 1265123..1265737 | + | 615 | WP_147195984.1 | hypothetical protein | - |
| EHV07_RS05870 () | 1266030..1266236 | - | 207 | WP_147195988.1 | hypothetical protein | - |
| EHV07_RS05875 () | 1266522..1266698 | + | 177 | WP_147195990.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| EHV07_RS05880 () | 1266745..1267152 | + | 408 | WP_147195992.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| EHV07_RS05885 () | 1267381..1267731 | + | 351 | WP_147200540.1 | phage holin, lambda family | - |
| EHV07_RS05890 () | 1267718..1268155 | + | 438 | WP_147195994.1 | lysozyme | - |
| EHV07_RS05900 () | 1268444..1268740 | + | 297 | WP_168199598.1 | peptidase | - |
| EHV07_RS05905 () | 1268744..1268980 | + | 237 | WP_147196001.1 | hypothetical protein | - |
| EHV07_RS05915 () | 1269255..1270142 | + | 888 | WP_147196003.1 | hypothetical protein | - |
| EHV07_RS05920 () | 1270150..1270401 | + | 252 | WP_147196005.1 | hypothetical protein | - |
| EHV07_RS05925 () | 1270391..1270771 | + | 381 | WP_147196007.1 | hypothetical protein | - |
| EHV07_RS05930 () | 1270899..1271345 | - | 447 | WP_147196009.1 | hypothetical protein | - |
| EHV07_RS05935 () | 1271366..1271938 | + | 573 | WP_147196011.1 | terminase small subunit | - |
| EHV07_RS05940 () | 1271940..1273598 | + | 1659 | WP_147196014.1 | phage terminase large subunit | - |
| EHV07_RS05945 () | 1273599..1275131 | + | 1533 | WP_147196017.1 | DUF1073 domain-containing protein | - |
| EHV07_RS05950 () | 1275184..1275870 | + | 687 | WP_147200541.1 | minor capsid protein | - |
| EHV07_RS05955 () | 1275883..1277196 | + | 1314 | WP_147196020.1 | DUF2213 domain-containing protein | - |
| EHV07_RS05960 () | 1277200..1277685 | + | 486 | WP_147196023.1 | hypothetical protein | - |
| EHV07_RS05965 () | 1277685..1278719 | + | 1035 | WP_147196025.1 | DUF2184 domain-containing protein | - |
| EHV07_RS05970 () | 1278723..1279049 | + | 327 | WP_147196028.1 | hypothetical protein | - |
| EHV07_RS05975 () | 1279052..1279495 | + | 444 | WP_147196030.1 | DUF4054 domain-containing protein | - |
| EHV07_RS05980 () | 1279498..1280073 | + | 576 | WP_147196032.1 | hypothetical protein | - |
| EHV07_RS05985 () | 1280070..1280447 | + | 378 | WP_147196034.1 | hypothetical protein | - |
| EHV07_RS05990 () | 1280444..1280983 | + | 540 | WP_174822353.1 | hypothetical protein | - |
| EHV07_RS05995 () | 1280984..1282462 | + | 1479 | WP_147196036.1 | DUF3383 domain-containing protein | - |
| EHV07_RS06000 () | 1282578..1282919 | + | 342 | WP_147200543.1 | hypothetical protein | - |
| EHV07_RS06005 () | 1282928..1283323 | + | 396 | WP_147196046.1 | hypothetical protein | - |
| EHV07_RS06010 () | 1283338..1283535 | + | 198 | WP_147196048.1 | transglycosylase | - |
| EHV07_RS06015 () | 1283535..1285385 | + | 1851 | WP_147196050.1 | hypothetical protein | - |
| EHV07_RS06020 () | 1285388..1286191 | + | 804 | WP_147196052.1 | hypothetical protein | - |
| EHV07_RS06025 () | 1286191..1286502 | + | 312 | WP_147196054.1 | hypothetical protein | - |
| EHV07_RS06030 () | 1286499..1287356 | + | 858 | WP_147196056.1 | hypothetical protein | - |
| EHV07_RS06035 () | 1287356..1288051 | + | 696 | WP_147196058.1 | oxidoreductase | - |
| EHV07_RS06040 () | 1288041..1288511 | - | 471 | WP_147196060.1 | hypothetical protein | - |
| EHV07_RS06045 () | 1288623..1288982 | + | 360 | WP_147196061.1 | hypothetical protein | - |
| EHV07_RS06050 () | 1288990..1290228 | + | 1239 | WP_147196063.1 | baseplate J/gp47 family protein | - |
| EHV07_RS06055 () | 1290225..1290899 | + | 675 | WP_147196066.1 | DUF2612 domain-containing protein | - |
| EHV07_RS24675 () | 1290889..1292208 | + | 1320 | WP_174822354.1 | hypothetical protein | - |
| EHV07_RS06065 () | 1292208..1292636 | + | 429 | WP_147196068.1 | tail fiber assembly protein | - |
| EHV07_RS06070 () | 1292664..1294034 | - | 1371 | WP_147196070.1 | DUF2142 domain-containing protein | - |
| EHV07_RS06075 () | 1294262..1294519 | + | 258 | WP_147196072.1 | hypothetical protein | - |
| EHV07_RS06080 () | 1294869..1296083 | + | 1215 | WP_147196074.1 | hypothetical protein ; Integrase | Integrase |
| EHV07_RS06085 () | 1296154..1296876 | + | 723 | WP_147196077.1 | hypothetical protein | - |
| EHV07_RS06090 () | 1297094..1297291 | + | 198 | WP_147196079.1 | AlpA family transcriptional regulator | - |
| EHV07_RS06095 () | 1297291..1297710 | + | 420 | WP_147200544.1 | hypothetical protein | - |
| EHV07_RS06100 () | 1297724..1298311 | + | 588 | WP_147196081.1 | antirepressor protein | - |
| EHV07_RS06105 () | 1298443..1299018 | + | 576 | WP_147200545.1 | host cell division inhibitor Icd-like protein | - |
| EHV07_RS06110 () | 1299011..1299343 | + | 333 | WP_147196083.1 | transcriptional regulator | - |
| EHV07_RS06115 () | 1299340..1299696 | + | 357 | WP_147196085.1 | hypothetical protein | - |
| EHV07_RS06120 () | 1299689..1302472 | + | 2784 | WP_147196087.1 | TOPRIM and DUF927 domain-containing protein | - |
| EHV07_RS06125 () | 1302766..1303182 | + | 417 | WP_147196089.1 | lysozyme | - |
| EHV07_RS06130 () | 1303179..1303612 | + | 434 | Protein_1190 | Rz lytic protein | - |
| EHV07_RS06135 () | 1303614..1303757 | + | 144 | WP_147196091.1 | rz1 lytic protein | - |
| EHV07_RS06140 () | 1303774..1303980 | - | 207 | WP_147196093.1 | HEAT repeat domain-containing protein | - |
| EHV07_RS06145 () | 1304165..1304629 | - | 465 | WP_147196095.1 | hypothetical protein | - |
| EHV07_RS06155 () | 1305301..1305855 | + | 555 | WP_147196097.1 | hypothetical protein | - |
| EHV07_RS06160 () | 1306209..1306748 | + | 540 | WP_147196099.1 | hypothetical protein | - |
| EHV07_RS06165 () | 1306788..1307141 | + | 354 | WP_147196101.1 | HNH endonuclease | - |
| EHV07_RS06170 () | 1307203..1307547 | + | 345 | WP_147196103.1 | hypothetical protein | - |
| EHV07_RS06180 () | 1307901..1308083 | + | 183 | WP_147196105.1 | hypothetical protein | - |
| EHV07_RS06185 () | 1308134..1308568 | + | 435 | Protein_1199 | hypothetical protein | - |
| EHV07_RS24470 () | 1308612..1308776 | - | 165 | WP_168199599.1 | hypothetical protein | - |
| EHV07_RS06190 () | 1308775..1308996 | + | 222 | WP_147196107.1 | hypothetical protein | - |
| EHV07_RS06200 () | 1309709..1309921 | + | 213 | WP_147196111.1 | hypothetical protein | - |
| EHV07_RS06205 () | 1309918..1310355 | - | 438 | WP_147196113.1 | hypothetical protein | - |
| EHV07_RS06210 () | 1310381..1310581 | + | 201 | Protein_1204 | terminase small subunit | - |
| EHV07_RS06215 () | 1311168..1311368 | + | 201 | WP_147196115.1 | hypothetical protein | - |
| EHV07_RS06220 () | 1311372..1312280 | + | 909 | WP_147196117.1 | S49 family peptidase | - |
| EHV07_RS06225 () | 1312313..1312720 | - | 408 | WP_147196119.1 | hypothetical protein | - |
| EHV07_RS06235 () | 1314291..1315358 | + | 1068 | WP_174822377.1 | mechanosensitive ion channel family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|