MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 130306 bp
Accession: NZ_CP034355 Location: 1..130306 Organism: Pseudomonas aeruginosa strain IMP-13 Replicon: plasmid pPYO_TB
Accession: NZ_CP034355 Location: 1..130306 Organism: Pseudomonas aeruginosa strain IMP-13 Replicon: plasmid pPYO_TB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EIP87_RS33560 () | 2501..2770 | - | 270 | WP_023100632.1 | hypothetical protein | - |
| EIP87_RS33565 () | 2763..3944 | - | 1182 | WP_164544125.1 | hypothetical protein | - |
| EIP87_RS33570 () | 3995..4714 | - | 720 | WP_033945870.1 | Bicarbonate transporter BicA | VF |
| EIP87_RS33575 () | 4730..5053 | - | 324 | WP_033945952.1 | hypothetical protein | - |
| EIP87_RS33580 () | 5280..5663 | - | 384 | WP_206432675.1 | hypothetical protein | - |
| EIP87_RS33585 () | 5674..6588 | - | 915 | WP_033945867.1 | hypothetical protein | VF |
| EIP87_RS33590 () | 6588..7802 | - | 1215 | WP_176601039.1 | ECF RNA polymerase sigma factor SigE | VF |
| EIP87_RS33595 () | 7826..8752 | - | 927 | WP_071556428.1 | hypothetical protein | VF |
| EIP87_RS33600 () | 8749..9402 | - | 654 | WP_034017936.1 | hypothetical protein | VF |
| EIP87_RS33605 () | 9532..10050 | - | 519 | WP_034017937.1 | hypothetical protein | - |
| EIP87_RS34490 () | 10069..10224 | - | 156 | WP_162836522.1 | hypothetical protein | - |
| EIP87_RS33610 () | 11385..12707 | + | 1323 | WP_176601038.1 | replication initiation protein | - |
| EIP87_RS33615 () | 13218..14267 | - | 1050 | WP_034017940.1 | ParB/RepB/Spo0J family partition protein | - |
| EIP87_RS33620 () | 14264..15388 | - | 1125 | WP_034017942.1 | AAA family ATPase | - |
| EIP87_RS33625 () | 15691..15963 | + | 273 | WP_034017944.1 | hypothetical protein | - |
| EIP87_RS33630 () | 15963..16883 | + | 921 | WP_034017945.1 | hypothetical protein | - |
| EIP87_RS33635 () | 16936..17475 | + | 540 | WP_174517468.1 | hypothetical protein | - |
| EIP87_RS33650 () | 18129..18323 | + | 195 | WP_023100616.1 | hypothetical protein | - |
| EIP87_RS33655 () | 18410..18715 | + | 306 | WP_023100615.1 | hypothetical protein | - |
| EIP87_RS33660 () | 18735..19496 | + | 762 | WP_023100614.1 | hypothetical protein | - |
| EIP87_RS33665 () | 19608..19970 | + | 363 | WP_023100613.1 | DNA binding protein | - |
| EIP87_RS33670 () | 20032..21003 | - | 972 | WP_023100612.1 | site-specific integrase | - |
| EIP87_RS33675 () | 21529..22017 | + | 489 | WP_023100611.1 | hypothetical protein | VF |
| EIP87_RS33680 () | 22004..22813 | + | 810 | WP_023100610.1 | hypothetical protein | VF |
| EIP87_RS33685 () | 22810..24015 | + | 1206 | WP_023100609.1 | hypothetical protein | VF |
| EIP87_RS34760 () | 24008..24277 | + | 270 | WP_023100608.1 | hypothetical protein | VF |
| EIP87_RS33695 () | 24369..25424 | + | 1056 | WP_171947060.1 | ParM/StbA family protein | - |
| EIP87_RS33700 () | 25428..25874 | + | 447 | WP_071534987.1 | hypothetical protein | - |
| EIP87_RS33705 () | 25902..26729 | + | 828 | WP_074197740.1 | hypothetical protein | VF |
| EIP87_RS33710 () | 26732..28423 | + | 1692 | WP_023100605.1 | Chloramphenicol acetyltransferase | VF |
| EIP87_RS33715 () | 28426..29766 | + | 1341 | WP_023100604.1 | type 4b pilus protein PilO2 | - |
| EIP87_RS33720 () | 29753..30274 | + | 522 | WP_023100603.1 | type IV pilus biogenesis protein PilP | - |
| EIP87_RS33725 () | 30294..31856 | + | 1563 | WP_023100602.1 | Tyrosine recombinase XerD | VF |
| EIP87_RS33730 () | 31858..32940 | + | 1083 | WP_023100601.1 | DNA-invertase hin | VF |
| EIP87_RS33735 () | 32937..33539 | + | 603 | WP_078451035.1 | hypothetical protein | VF |
| EIP87_RS33740 () | 33567..34544 | + | 978 | WP_023100599.1 | Beta-lactamase TEM | VF |
| EIP87_RS33745 () | 34541..35629 | + | 1089 | Protein_37 | hypothetical protein | VF |
| EIP87_RS33750 () | 35843..36046 | - | 204 | Protein_38 | Tn3 family transposase TnpA_ISPa42 | Transposase |
| EIP87_RS33755 () | 36205..36624 | + | 420 | WP_078451034.1 | hypothetical protein | - |
| EIP87_RS33760 () | 36811..38697 | + | 1887 | WP_023111168.1 | hypothetical protein | VF |
| EIP87_RS33765 () | 38755..39012 | - | 258 | WP_031634029.1 | helix-turn-helix domain-containing protein | - |
| EIP87_RS33770 () | 39165..39503 | + | 339 | WP_023100595.1 | hypothetical protein | - |
| EIP87_RS33775 () | 39613..41874 | - | 2262 | WP_023100594.1 | DotA/TraY family protein | - |
| EIP87_RS33780 () | 42190..42687 | + | 498 | WP_023100593.1 | hypothetical protein | - |
| EIP87_RS33785 () | 42680..43171 | + | 492 | WP_023111169.1 | hypothetical protein | - |
| EIP87_RS33790 () | 43187..44317 | + | 1131 | WP_031634027.1 | hypothetical protein | - |
| EIP87_RS33795 () | 44374..45408 | + | 1035 | WP_074197753.1 | hypothetical protein | - |
| EIP87_RS33800 () | 45408..45689 | + | 282 | WP_023100589.1 | hypothetical protein | - |
| EIP87_RS33805 () | 45781..46293 | + | 513 | WP_023100588.1 | hypothetical protein | - |
| EIP87_RS33810 () | 46562..47197 | - | 636 | WP_031634023.1 | hypothetical protein | - |
| EIP87_RS33815 () | 47219..48262 | - | 1044 | WP_023100586.1 | type IV CRISPR-associated protein Csf2 | - |
| EIP87_RS33820 () | 48262..49053 | - | 792 | WP_023100585.1 | CRISPR type aferr-associated protein csf1 | - |
| EIP87_RS33825 () | 49046..49771 | - | 726 | WP_023100584.1 | hypothetical protein | - |
| EIP87_RS33830 () | 49860..52034 | + | 2175 | WP_023100583.1 | CRISPR type aferr-associated dead/deah-box helicase csf4 | - |
| EIP87_RS33835 () | 52154..52762 | + | 609 | WP_023100582.1 | hypothetical protein | - |
| EIP87_RS33840 () | 52743..53255 | + | 513 | WP_034018089.1 | hypothetical protein | - |
| EIP87_RS33845 () | 53275..54084 | - | 810 | WP_071556427.1 | Mercuric reductase | Relaxase |
| EIP87_RS33850 () | 54123..54506 | - | 384 | WP_034018088.1 | hypothetical protein | - |
| EIP87_RS33855 () | 54511..55044 | - | 534 | WP_034018087.1 | hypothetical protein | - |
| EIP87_RS33860 () | 55328..55624 | - | 297 | Protein_60 | type IV pilus biogenesis protein PilM | - |
| EIP87_RS34495 () | 55615..55758 | - | 144 | WP_164544126.1 | hypothetical protein | - |
| EIP87_RS33870 () | 55926..57308 | + | 1383 | WP_034018086.1 | hypothetical protein | - |
| EIP87_RS33875 () | 57348..58448 | + | 1101 | WP_034018084.1 | hypothetical protein | - |
| EIP87_RS33880 () | 58450..58707 | + | 258 | WP_031634014.1 | hypothetical protein | - |
| EIP87_RS33885 () | 58708..60285 | + | 1578 | WP_034018082.1 | type IA DNA topoisomerase | - |
| EIP87_RS33890 () | 60314..60565 | + | 252 | WP_034018080.1 | hypothetical protein | - |
| EIP87_RS33895 () | 60696..61073 | + | 378 | WP_171953617.1 | hypothetical protein | - |
| EIP87_RS33900 () | 61073..62245 | + | 1173 | WP_034080928.1 | hypothetical protein | - |
| EIP87_RS33905 () | 62238..62705 | + | 468 | WP_023100571.1 | hypothetical protein | - |
| EIP87_RS33910 () | 62720..63130 | + | 411 | WP_031634010.1 | Thermonuclease | VF |
| EIP87_RS34500 () | 63127..64269 | + | 1143 | WP_034018076.1 | hypothetical protein | - |
| EIP87_RS33930 () | 64250..65023 | + | 774 | WP_034018075.1 | hypothetical protein | - |
| EIP87_RS33935 () | 65038..67572 | + | 2535 | WP_052157352.1 | HTH-type transcriptional repressor CytR | VF |
| EIP87_RS33940 () | 67569..68189 | + | 621 | WP_023100566.1 | DUF882 domain-containing protein | - |
| EIP87_RS33945 () | 68177..68971 | + | 795 | WP_034018074.1 | thiol:disulfide interchange protein DsbG | - |
| EIP87_RS33950 () | 69054..69455 | + | 402 | WP_023100564.1 | hypothetical protein | - |
| EIP87_RS34505 () | 69649..69807 | + | 159 | WP_023100563.1 | hypothetical protein | - |
| EIP87_RS33955 () | 69813..71420 | + | 1608 | WP_034018072.1 | DUF1738 domain-containing protein | - |
| EIP87_RS33960 () | 71436..72608 | + | 1173 | WP_034018071.1 | hypothetical protein | - |
| EIP87_RS34510 () | 72712..72876 | - | 165 | WP_023100560.1 | hypothetical protein | - |
| EIP87_RS33965 () | 72999..73940 | + | 942 | WP_034018069.1 | tRNA(fMet)-specific endonuclease VapC | VF |
| EIP87_RS33970 () | 74004..74624 | + | 621 | WP_023100558.1 | hypothetical protein | - |
| EIP87_RS33975 () | 74645..80724 | + | 6080 | Protein_83 | hypothetical protein | - |
| EIP87_RS33980 () | 81001..82650 | - | 1650 | WP_050396319.1 | DNA sulfur modification protein DndB | - |
| EIP87_RS33985 () | 82717..82917 | - | 201 | WP_023100679.1 | hypothetical protein | - |
| EIP87_RS33990 () | 82938..83288 | - | 351 | WP_023100680.1 | hypothetical protein | - |
| EIP87_RS33995 () | 83345..84205 | - | 861 | WP_034018092.1 | SprT-like domain-containing protein | - |
| EIP87_RS34000 () | 84319..84597 | - | 279 | WP_034018064.1 | HU family DNA-binding protein | - |
| EIP87_RS34005 () | 84664..84993 | - | 330 | WP_034018062.1 | hypothetical protein | - |
| EIP87_RS34010 () | 85370..85654 | + | 285 | WP_034018060.1 | hypothetical protein | - |
| EIP87_RS34015 () | 85663..86595 | + | 933 | WP_034018059.1 | recombination-associated protein RdgC | - |
| EIP87_RS34020 () | 86601..88676 | + | 2076 | WP_034018058.1 | DNA cytosine methyltransferase | - |
| EIP87_RS34025 () | 88666..88896 | + | 231 | WP_034018057.1 | hypothetical protein | - |
| EIP87_RS34030 () | 88893..89429 | + | 537 | WP_034018056.1 | hypothetical protein | - |
| EIP87_RS34035 () | 89426..90109 | + | 684 | WP_034018055.1 | hypothetical protein | - |
| EIP87_RS34040 () | 90118..90516 | + | 399 | WP_176742248.1 | hypothetical protein | - |
| EIP87_RS34045 () | 90567..91043 | + | 477 | WP_034026837.1 | single-stranded DNA-binding protein | - |
| EIP87_RS34050 () | 91117..91536 | + | 420 | WP_057380713.1 | hypothetical protein | - |
| EIP87_RS34055 () | 91533..91781 | + | 249 | WP_034017785.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EIP87_RS34060 () | 91778..92128 | + | 351 | WP_023100676.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| EIP87_RS34065 () | 92128..92850 | + | 723 | WP_031634065.1 | hypothetical protein | - |
| EIP87_RS34070 () | 92899..93351 | - | 453 | WP_023100674.1 | hypothetical protein | - |
| EIP87_RS34080 () | 93733..94068 | - | 336 | WP_023100673.1 | hypothetical protein | - |
| EIP87_RS34085 () | 94105..94386 | - | 282 | WP_023100672.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| EIP87_RS34090 () | 94373..94636 | - | 264 | WP_020303033.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| EIP87_RS34095 () | 94960..95703 | - | 744 | WP_023100671.1 | hypothetical protein | - |
| EIP87_RS34100 () | 95935..96426 | - | 492 | WP_023100670.1 | hypothetical protein | - |
| EIP87_RS34105 () | 96426..97772 | - | 1347 | WP_125728849.1 | replicative DNA helicase | - |
| EIP87_RS34110 () | 97959..98420 | - | 462 | WP_033955307.1 | hypothetical protein | - |
| EIP87_RS34115 () | 98613..98930 | - | 318 | WP_171942272.1 | hypothetical protein | - |
| EIP87_RS34120 () | 99023..99736 | - | 714 | WP_023100667.1 | hypothetical protein | - |
| EIP87_RS34125 () | 99750..101729 | - | 1980 | WP_034017788.1 | DEAD/DEAH box helicase | - |
| EIP87_RS34130 () | 101992..102426 | - | 435 | WP_023100664.1 | hypothetical protein | - |
| EIP87_RS34135 () | 102474..102671 | - | 198 | WP_023100663.1 | hypothetical protein | - |
| EIP87_RS34515 () | 102682..102846 | - | 165 | WP_153562525.1 | hypothetical protein | - |
| EIP87_RS34140 () | 102859..103119 | - | 261 | WP_023100661.1 | hypothetical protein | - |
| EIP87_RS34145 () | 103131..103328 | - | 198 | WP_003149051.1 | hypothetical protein | - |
| EIP87_RS34150 () | 103347..103553 | - | 207 | WP_023093721.1 | hypothetical protein | - |
| EIP87_RS34155 () | 103569..103751 | - | 183 | WP_023100660.1 | hypothetical protein | - |
| EIP87_RS34160 () | 103763..104164 | - | 402 | WP_023111166.1 | DUF2591 family protein | - |
| EIP87_RS34165 () | 104186..104467 | - | 282 | WP_023100659.1 | hypothetical protein | - |
| EIP87_RS34170 () | 104489..104914 | - | 426 | WP_125728850.1 | hypothetical protein | - |
| EIP87_RS34175 () | 104932..105195 | - | 264 | WP_125728851.1 | hypothetical protein | - |
| EIP87_RS34180 () | 105210..105509 | - | 300 | WP_125728852.1 | hypothetical protein | - |
| EIP87_RS34185 () | 105569..105781 | - | 213 | WP_125728853.1 | hypothetical protein | - |
| EIP87_RS34190 () | 105915..106148 | - | 234 | WP_125728854.1 | hypothetical protein | - |
| EIP87_RS34520 () | 106159..106317 | - | 159 | WP_164544127.1 | hypothetical protein | - |
| EIP87_RS34195 () | 106327..106584 | - | 258 | WP_164544128.1 | hypothetical protein | - |
| EIP87_RS34200 () | 106686..107243 | - | 558 | WP_125728856.1 | tyrosine-type recombinase/integrase | - |
| EIP87_RS34215 () | 108596..108922 | - | 327 | WP_023100653.1 | hypothetical protein | - |
| EIP87_RS34220 () | 109568..110260 | - | 693 | WP_174517462.1 | EAL domain-containing protein | - |
| EIP87_RS34225 () | 110309..110824 | - | 516 | WP_023100651.1 | hypothetical protein | - |
| EIP87_RS34230 () | 110880..111563 | - | 684 | WP_023100650.1 | hypothetical protein | - |
| EIP87_RS34235 () | 111573..113723 | - | 2151 | WP_023100649.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| EIP87_RS34240 () | 113821..114099 | + | 279 | WP_023100648.1 | hypothetical protein | - |
| EIP87_RS34245 () | 114116..114460 | - | 345 | WP_023100647.1 | hypothetical protein | - |
| EIP87_RS34250 () | 114470..119704 | - | 5235 | WP_023100646.1 | strawberry notch C-terminal domain-containing protein | - |
| EIP87_RS34255 () | 119780..121081 | - | 1302 | WP_023100645.1 | hypothetical protein | - |
| EIP87_RS34260 () | 121117..122616 | - | 1500 | WP_174517464.1 | UvrD-helicase domain-containing protein | - |
| EIP87_RS34265 () | 122763..123239 | - | 477 | WP_023100643.1 | hypothetical protein | - |
| EIP87_RS34270 () | 123274..123501 | - | 228 | WP_023100642.1 | hypothetical protein | - |
| EIP87_RS34275 () | 123523..123864 | - | 342 | WP_023100641.1 | hypothetical protein | - |
| EIP87_RS34280 () | 123874..124404 | - | 531 | WP_023100640.1 | hypothetical protein | - |
| EIP87_RS34285 () | 124433..125050 | - | 618 | WP_023111167.1 | hypothetical protein | - |
| EIP87_RS34290 () | 125131..125736 | - | 606 | WP_023100638.1 | hypothetical protein | - |
| EIP87_RS34295 () | 125758..125997 | - | 240 | WP_049875203.1 | hypothetical protein | - |
| EIP87_RS34300 () | 126076..126975 | - | 900 | WP_086352096.1 | hypothetical protein | - |
| EIP87_RS34305 () | 127188..127946 | - | 759 | WP_074197742.1 | hypothetical protein | - |
| EIP87_RS34310 () | 128166..128771 | - | 606 | WP_023100635.1 | hypothetical protein | - |
| EIP87_RS34315 () | 128877..129230 | - | 354 | WP_176601040.1 | hypothetical protein | - |
| EIP87_RS34325 () | 129350..129787 | - | 438 | WP_125728857.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|