MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60954 bp
Accession: NZ_CP034109 Location: 1..60954 Organism: Escherichia coli strain RCAD0514 Replicon: plasmid pRCAD0514EC-3
Accession: NZ_CP034109 Location: 1..60954 Organism: Escherichia coli strain RCAD0514 Replicon: plasmid pRCAD0514EC-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGA47_RS23805 () | 2092..2355 | - | 264 | WP_148119646.1 | plasmid mobilization relaxosome protein MobC | - |
| EGA47_RS23810 () | 2804..3206 | + | 403 | Protein_2 | zinc transporter | - |
| EGA47_RS23815 () | 3224..3976 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| EGA47_RS23820 () | 3978..4670 | + | 693 | WP_205962687.1 | hypothetical protein | - |
| EGA47_RS23825 () | 4706..5146 | + | 441 | WP_023223352.1 | hypothetical protein | - |
| EGA47_RS23830 () | 5148..5474 | + | 327 | WP_000206697.1 | hypothetical protein | - |
| EGA47_RS23835 () | 5734..6033 | - | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| EGA47_RS23840 () | 6535..6717 | + | 183 | WP_001428470.1 | hypothetical protein | - |
| EGA47_RS23845 () | 6805..7152 | - | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| EGA47_RS23850 () | 7149..7397 | - | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| EGA47_RS23855 () | 7886..8179 | - | 294 | WP_000673428.1 | hypothetical protein | - |
| EGA47_RS23860 () | 8311..8544 | - | 234 | WP_000553847.1 | hypothetical protein | - |
| EGA47_RS23865 () | 8750..8992 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| EGA47_RS23870 () | 8989..9243 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| EGA47_RS23875 () | 9240..9782 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| EGA47_RS23880 () | 9886..10401 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| EGA47_RS23885 () | 11248..11497 | - | 250 | Protein_17 | hypothetical protein | - |
| EGA47_RS23890 () | 11721..12386 | + | 666 | WP_000532149.1 | P-loop NTPase | - |
| EGA47_RS23895 () | 12460..12744 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| EGA47_RS23900 () | 12762..13358 | - | 597 | WP_000125165.1 | hypothetical protein | - |
| EGA47_RS23905 () | 13508..13669 | - | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| EGA47_RS23910 () | 14053..14214 | - | 162 | WP_001128311.1 | hypothetical protein | - |
| EGA47_RS23915 () | 15269..16297 | - | 1029 | WP_001175215.1 | replication initiation protein | - |
| EGA47_RS23920 () | 17376..17882 | + | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| EGA47_RS23925 () | 17875..18090 | + | 216 | WP_001127357.1 | DUF1187 family protein | - |
| EGA47_RS23930 () | 18083..18259 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| EGA47_RS23935 () | 18286..19239 | + | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| EGA47_RS23940 () | 19613..20056 | + | 444 | WP_000964330.1 | NfeD family protein | - |
| EGA47_RS23945 () | 20060..20230 | + | 171 | WP_000550720.1 | hypothetical protein | - |
| EGA47_RS23950 () | 20241..20687 | + | 447 | WP_001243165.1 | hypothetical protein | - |
| EGA47_RS23955 () | 20720..20977 | + | 258 | WP_001542015.1 | hypothetical protein | - |
| EGA47_RS23960 () | 21256..21513 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| EGA47_RS23965 () | 21517..22512 | + | 996 | WP_001028540.1 | hypothetical protein | VF |
| EGA47_RS23970 () | 22518..23162 | + | 645 | WP_001310442.1 | hypothetical protein | VF |
| EGA47_RS23975 () | 23171..23395 | + | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| EGA47_RS23980 () | 23618..24427 | - | 810 | WP_024237698.1 | hypothetical protein | - |
| EGA47_RS23985 () | 24475..24774 | + | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| EGA47_RS23990 () | 24777..26012 | + | 1236 | WP_034169417.1 | hypothetical protein | VF |
| EGA47_RS23995 () | 26018..26455 | + | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| EGA47_RS24000 () | 26574..26972 | + | 399 | WP_001153669.1 | hypothetical protein | - |
| EGA47_RS24005 () | 26993..27576 | + | 584 | Protein_41 | Type IV secretion system protein virB1 | VF |
| EGA47_RS24010 () | 27678..27866 | + | 189 | WP_050567133.1 | hypothetical protein | - |
| EGA47_RS24015 () | 27937..28257 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| EGA47_RS24020 () | 28263..30620 | + | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| EGA47_RS24025 () | 30652..30786 | + | 135 | WP_000701233.1 | hypothetical protein | - |
| EGA47_RS24030 () | 30786..31520 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| EGA47_RS24035 () | 31586..32287 | + | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| EGA47_RS24040 () | 32277..33416 | + | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| EGA47_RS24045 () | 33435..34490 | + | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| EGA47_RS24050 () | 34506..36464 | + | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| EGA47_RS24055 () | 36511..37053 | + | 543 | WP_001220544.1 | sigma 54-interacting transcriptional regulator | - |
| EGA47_RS24060 () | 37046..38689 | + | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| EGA47_RS24065 () | 38728..40050 | + | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| EGA47_RS24070 () | 40034..40528 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| EGA47_RS24075 () | 40553..42091 | + | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| EGA47_RS24080 () | 42082..43191 | + | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EGA47_RS24085 () | 43241..43804 | + | 564 | WP_034169414.1 | hypothetical protein | - |
| EGA47_RS24090 () | 43870..44352 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| EGA47_RS24095 () | 44356..44991 | + | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| EGA47_RS24100 () | 45004..46047 | + | 1044 | Protein_60 | hypothetical protein | VF |
| EGA47_RS24105 () | 46306..46515 | + | 210 | WP_001444223.1 | hypothetical protein | - |
| EGA47_RS24110 () | 48006..49130 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| EGA47_RS24115 () | 49142..49795 | + | 654 | WP_170855322.1 | hypothetical protein | - |
| EGA47_RS24120 () | 49842..50357 | + | 516 | WP_000698398.1 | thermonuclease family protein | - |
| EGA47_RS24125 () | 50452..52128 | + | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| EGA47_RS24130 () | 52298..52873 | + | 576 | WP_001303470.1 | hypothetical protein | - |
| EGA47_RS24135 () | 52878..55043 | + | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| EGA47_RS24140 () | 55112..55318 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| EGA47_RS24145 () | 55664..56104 | + | 441 | WP_000666084.1 | hypothetical protein | - |
| EGA47_RS24150 () | 56063..56836 | - | 774 | WP_052234578.1 | PAP2 family protein | - |
| EGA47_RS24155 () | 56908..58533 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|