MGE detailed information
MGE type: Prophage MGE length: 34402 bp
Accession: NZ_CP034005 Location: 1885776..1920177 Organism: Staphylococcus aureus strain P1D7C1 Replicon: chromosome
Accession: NZ_CP034005 Location: 1885776..1920177 Organism: Staphylococcus aureus strain P1D7C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD70_RS09045 () | 1881589..1882335 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| EFD70_RS09050 () | 1882340..1882813 | - | 474 | WP_156668031.1 | nucleoside triphosphatase YtkD | - |
| EFD70_RS09055 () | 1882879..1883136 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| EFD70_RS09060 () | 1883133..1884134 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| EFD70_RS09065 () | 1884139..1885617 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| EFD70_RS09070 () | 1885776..1886231 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| EFD70_RS09075 () | 1886534..1887184 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| EFD70_RS09080 () | 1887265..1888260 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| EFD70_RS09085 () | 1888335..1888961 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| EFD70_RS09090 () | 1889002..1889343 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| EFD70_RS09095 () | 1889444..1890016 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| EFD70_RS09100 () | 1890214..1891226 | - | 1013 | Protein_1776 | IS3 family transposase | - |
| EFD70_RS09105 () | 1891371..1891466 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1891494..1891551 | - | 58 | - | - | Antitoxin Detail |
| EFD70_RS09110 () | 1891589..1891690 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| EFD70_RS09115 () | 1891668..1891829 | - | 162 | Protein_1779 | transposase | - |
| EFD70_RS09120 () | 1891820..1892314 | - | 495 | Protein_1780 | transposase | - |
| EFD70_RS09125 () | 1892766..1893995 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| EFD70_RS09130 () | 1893988..1895544 | - | 1557 | WP_064135920.1 | type I restriction-modification system subunit M | - |
| EFD70_RS09135 () | 1895708..1895842 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| EFD70_RS09140 () | 1895905..1896624 | - | 720 | WP_001038702.1 | serine protease SplF | - |
| EFD70_RS09145 () | 1896745..1897464 | - | 720 | WP_001038872.1 | serine protease SplC | - |
| EFD70_RS09150 () | 1897522..1898244 | - | 723 | WP_001039454.1 | serine protease SplB | - |
| EFD70_RS09155 () | 1898369..1899076 | - | 708 | WP_001039427.1 | serine protease SplA | - |
| EFD70_RS09160 () | 1900040..1900621 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| EFD70_RS09165 () | 1901094..1901382 | - | 289 | Protein_1789 | BsaG protein | - |
| EFD70_RS09170 () | 1901568..1902041 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| EFD70_RS09175 () | 1902046..1902837 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| EFD70_RS09180 () | 1903207..1904190 | - | 984 | WP_000782463.1 | bi-component leukocidin LukED subunit D | - |
| EFD70_RS09185 () | 1904192..1905127 | - | 936 | WP_156668032.1 | bi-component leukocidin LukED subunit E | - |
| EFD70_RS14030 () | 1906023..1906454 | + | 432 | Protein_1794 | hypothetical protein | - |
| EFD70_RS09190 () | 1906491..1907279 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| EFD70_RS09195 () | 1908113..1908607 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| EFD70_RS09200 () | 1908685..1908921 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| EFD70_RS09205 () | 1908942..1909718 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| EFD70_RS09210 () | 1910270..1911046 | - | 777 | WP_000736712.1 | staphylococcal enterotoxin type G | - |
| EFD70_RS09215 () | 1911329..1912084 | - | 756 | WP_001236362.1 | staphylococcal enterotoxin type N | - |
| EFD70_RS09220 () | 1912123..1912894 | - | 772 | Protein_1801 | staphylococcal enterotoxin type C1/U | - |
| EFD70_RS09225 () | 1913048..1913776 | - | 729 | WP_000713847.1 | staphylococcal enterotoxin type I | - |
| EFD70_RS09230 () | 1913811..1914530 | - | 720 | WP_000821658.1 | staphylococcal enterotoxin type M | - |
| EFD70_RS09235 () | 1914811..1915593 | - | 783 | WP_010922839.1 | staphylococcal enterotoxin type O | - |
| EFD70_RS09280 () | 1916953..1917507 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| EFD70_RS09285 () | 1917830..1919230 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| EFD70_RS09290 () | 1919254..1920177 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| EFD70_RS09295 () | 1920235..1921272 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| EFD70_RS09300 () | 1921262..1921372 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| EFD70_RS09305 () | 1921535..1922038 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| EFD70_RS09310 () | 1922162..1923385 | - | 1224 | WP_000551836.1 | ABC transporter permease | - |
| EFD70_RS09315 () | 1923378..1924118 | - | 741 | WP_000216874.1 | ABC transporter ATP-binding protein | - |
| EFD70_RS09320 () | 1924252..1924674 | + | 423 | WP_000004981.1 | HIT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.003 |