MGE detailed information
MGE type: Prophage MGE length: 36039 bp
Accession: NZ_CP033990 Location: 1883947..1919985 Organism: Staphylococcus aureus strain P1D14C1 Replicon: chromosome
Accession: NZ_CP033990 Location: 1883947..1919985 Organism: Staphylococcus aureus strain P1D14C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD75_RS09040 () | 1879427..1881019 | + | 1593 | WP_000109906.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| EFD75_RS09045 () | 1881397..1882143 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| EFD75_RS09050 () | 1882148..1882621 | - | 474 | WP_156668031.1 | nucleoside triphosphatase YtkD | - |
| EFD75_RS09055 () | 1882687..1882944 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| EFD75_RS09060 () | 1882941..1883942 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| EFD75_RS09065 () | 1883947..1885425 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| EFD75_RS09070 () | 1885584..1886039 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| EFD75_RS09075 () | 1886342..1886992 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| EFD75_RS09080 () | 1887073..1888068 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| EFD75_RS09085 () | 1888143..1888769 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| EFD75_RS09090 () | 1888810..1889151 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| EFD75_RS09095 () | 1889252..1889824 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| EFD75_RS09100 () | 1890022..1891034 | - | 1013 | Protein_1774 | IS3 family transposase ISClsp1 | Transposase |
| EFD75_RS09105 () | 1891179..1891274 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1891302..1891359 | - | 58 | - | - | Antitoxin Detail |
| EFD75_RS09110 () | 1891397..1891498 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| EFD75_RS09115 () | 1891476..1891637 | - | 162 | Protein_1777 | transposase | - |
| EFD75_RS09120 () | 1891628..1892122 | - | 495 | Protein_1778 | IS21 family transposase IS232 | Transposase |
| EFD75_RS09125 () | 1892574..1893803 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| EFD75_RS09130 () | 1893796..1895352 | - | 1557 | WP_064135920.1 | type I restriction-modification system subunit M | - |
| EFD75_RS09135 () | 1895516..1895650 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| EFD75_RS09140 () | 1895713..1896432 | - | 720 | WP_001038702.1 | Cold shock-like protein CspE | VF |
| EFD75_RS09145 () | 1896553..1897272 | - | 720 | WP_001038872.1 | Cold shock-like protein CspE | VF |
| EFD75_RS09150 () | 1897330..1898052 | - | 723 | WP_001039454.1 | hypothetical protein | VF |
| EFD75_RS09155 () | 1898177..1898884 | - | 708 | WP_001039427.1 | hypothetical protein | VF |
| EFD75_RS09160 () | 1899848..1900429 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| EFD75_RS09165 () | 1900902..1901190 | - | 289 | Protein_1787 | BsaG protein | - |
| EFD75_RS09170 () | 1901376..1901849 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| EFD75_RS09175 () | 1901854..1902645 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| EFD75_RS09180 () | 1903015..1903998 | - | 984 | WP_000782463.1 | Chromosome partition protein MukF | VF |
| EFD75_RS09185 () | 1904000..1904935 | - | 936 | WP_156668032.1 | Chromosome partition protein MukE | VF |
| EFD75_RS14040 () | 1905831..1906262 | + | 432 | Protein_1792 | hypothetical protein | - |
| EFD75_RS09190 () | 1906299..1907087 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| EFD75_RS09195 () | 1907921..1908415 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| EFD75_RS09200 () | 1908493..1908729 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| EFD75_RS09205 () | 1908750..1909526 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| EFD75_RS09210 () | 1910078..1910854 | - | 777 | WP_000736712.1 | Outer membrane protein N | VF |
| EFD75_RS09215 () | 1911137..1911892 | - | 756 | WP_001236362.1 | Asparagine--tRNA ligase | VF |
| EFD75_RS09220 () | 1911931..1912702 | - | 772 | Protein_1799 | Nicotinate phosphoribosyltransferase | VF |
| EFD75_RS09225 () | 1912856..1913584 | - | 729 | WP_000713847.1 | Aminopeptidase N | VF |
| EFD75_RS09230 () | 1913619..1914338 | - | 720 | WP_000821658.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| EFD75_RS09235 () | 1914619..1915401 | - | 783 | WP_010922839.1 | Putative aliphatic sulfonates transport permease protein SsuC | VF |
| EFD75_RS09280 () | 1916761..1917315 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| EFD75_RS09285 () | 1917638..1919038 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| EFD75_RS09290 () | 1919062..1919985 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| EFD75_RS09295 () | 1920043..1921080 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| EFD75_RS09300 () | 1921070..1921180 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| EFD75_RS09305 () | 1921343..1921846 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| EFD75_RS09310 () | 1921970..1923193 | - | 1224 | WP_000551836.1 | ABC transporter permease | - |
| EFD75_RS09315 () | 1923186..1923926 | - | 741 | WP_000216874.1 | ABC transporter ATP-binding protein | - |
| EFD75_RS09320 () | 1924060..1924482 | + | 423 | WP_000004981.1 | HIT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.004 |