MGE detailed information
MGE type: Prophage MGE length: 31733 bp
Accession: NZ_CP033987 Location: 1932327..1964059 Organism: Staphylococcus aureus strain P2D1C1 Replicon: chromosome
Accession: NZ_CP033987 Location: 1932327..1964059 Organism: Staphylococcus aureus strain P2D1C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD76_RS09455 () | 1928140..1928886 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| EFD76_RS09460 () | 1928891..1929364 | - | 474 | WP_156668031.1 | nucleoside triphosphatase YtkD | - |
| EFD76_RS09465 () | 1929430..1929687 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| EFD76_RS09470 () | 1929684..1930685 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| EFD76_RS09475 () | 1930690..1932168 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| EFD76_RS09480 () | 1932327..1932782 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| EFD76_RS09485 () | 1933085..1933735 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| EFD76_RS09490 () | 1933816..1934811 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| EFD76_RS09495 () | 1934886..1935512 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| EFD76_RS09500 () | 1935553..1935894 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| EFD76_RS09505 () | 1935995..1936567 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| EFD76_RS09510 () | 1936765..1937777 | - | 1013 | Protein_1829 | IS3 family transposase ISClsp1 | Transposase |
| EFD76_RS09515 () | 1937922..1938017 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1938045..1938102 | - | 58 | - | - | Antitoxin Detail |
| EFD76_RS09520 () | 1938140..1938241 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| EFD76_RS09525 () | 1938219..1938380 | - | 162 | Protein_1832 | transposase | - |
| EFD76_RS09530 () | 1938371..1938865 | - | 495 | Protein_1833 | IS21 family transposase IS232 | Transposase |
| EFD76_RS09535 () | 1939317..1940546 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| EFD76_RS09540 () | 1940539..1942095 | - | 1557 | WP_064135920.1 | type I restriction-modification system subunit M | - |
| EFD76_RS09545 () | 1942259..1942393 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| EFD76_RS09550 () | 1942456..1943175 | - | 720 | WP_001038702.1 | Serine protease SplF | VF |
| EFD76_RS09555 () | 1943296..1944015 | - | 720 | WP_001038872.1 | Serine protease SplC | VF |
| EFD76_RS09560 () | 1944073..1944795 | - | 723 | WP_001039454.1 | Serine protease SplB | VF |
| EFD76_RS09565 () | 1944920..1945627 | - | 708 | WP_001039427.1 | Serine protease SplA | VF |
| EFD76_RS09570 () | 1946591..1947172 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| EFD76_RS09575 () | 1947645..1947933 | - | 289 | Protein_1842 | BsaG protein | - |
| EFD76_RS09580 () | 1948119..1948592 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| EFD76_RS09585 () | 1948597..1949388 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| EFD76_RS09590 () | 1949758..1950741 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| EFD76_RS09595 () | 1950743..1951678 | - | 936 | WP_156668032.1 | Leucotoxin LukEv | VF |
| EFD76_RS14455 () | 1952574..1953005 | + | 432 | Protein_1847 | hypothetical protein | - |
| EFD76_RS09600 () | 1953042..1953830 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| EFD76_RS09605 () | 1954664..1955158 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| EFD76_RS09610 () | 1955236..1955472 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| EFD76_RS09615 () | 1955493..1956269 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| EFD76_RS09620 () | 1956821..1957597 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| EFD76_RS09625 () | 1957880..1958635 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| EFD76_RS09630 () | 1958674..1959445 | - | 772 | Protein_1854 | Enterotoxin type C-2 | VF |
| EFD76_RS09635 () | 1959599..1960327 | - | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| EFD76_RS09640 () | 1960362..1961081 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| EFD76_RS09645 () | 1961362..1962144 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| EFD76_RS09690 () | 1963505..1964059 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| EFD76_RS09695 () | 1964382..1965782 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| EFD76_RS09700 () | 1965806..1966729 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| EFD76_RS09705 () | 1966787..1967824 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| EFD76_RS09710 () | 1967814..1967924 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| EFD76_RS09715 () | 1968087..1968590 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.001 |