MGE detailed information
MGE type: Conjugative plasmid MGE length: 143865 bp
Accession: NZ_CP033847 Location: 1..143865 Organism: Escherichia coli strain FDAARGOS_497 Replicon: plasmid unnamed1
Accession: NZ_CP033847 Location: 1..143865 Organism: Escherichia coli strain FDAARGOS_497 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGY17_RS27465 () | 314..607 | + | 294 | WP_175271036.1 | hypothetical protein | - |
| EGY17_RS27470 () | 609..815 | + | 207 | WP_000275854.1 | hypothetical protein | - |
| EGY17_RS00010 () | 840..1127 | + | 288 | WP_000107242.1 | hypothetical protein | - |
| EGY17_RS00015 () | 1246..2067 | + | 822 | WP_001234465.1 | DUF945 domain-containing protein | - |
| EGY17_RS00020 () | 2363..2935 | - | 573 | WP_000949660.1 | transglycosylase SLT domain-containing protein | - |
| EGY17_RS00025 () | 3305..3688 | + | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| EGY17_RS00030 () | 3879..4526 | + | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| EGY17_RS00035 () | 4662..4877 | + | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| EGY17_RS00040 () | 4920..5285 | + | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| EGY17_RS00045 () | 5300..5611 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| EGY17_RS00050 () | 5633..6199 | + | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| EGY17_RS00055 () | 6210..6914 | + | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| EGY17_RS00060 () | 6914..8341 | + | 1428 | WP_001553836.1 | conjugal transfer protein TraB | - |
| EGY17_RS00065 () | 8331..8921 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| EGY17_RS00070 () | 8908..9045 | + | 138 | WP_001553834.1 | conjugal transfer protein TrbD | - |
| EGY17_RS00075 () | 9067..9228 | + | 162 | WP_000741714.1 | conjugal transfer protein TrbD | - |
| EGY17_RS00080 () | 9221..9472 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| EGY17_RS00085 () | 9469..9984 | + | 516 | WP_000809832.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EGY17_RS00090 () | 10119..10340 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| EGY17_RS00095 () | 10500..13127 | + | 2628 | WP_001064264.1 | type IV secretion system protein TraC | - |
| EGY17_RS00100 () | 13124..13510 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| EGY17_RS00105 () | 13507..14139 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| EGY17_RS00110 () | 14136..15128 | + | 993 | WP_001553833.1 | conjugal transfer pilus assembly protein TraU | - |
| EGY17_RS00115 () | 15137..15775 | + | 639 | WP_001553832.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EGY17_RS00120 () | 15772..17580 | + | 1809 | WP_078207904.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EGY17_RS00125 () | 17607..17864 | + | 258 | WP_063816956.1 | conjugal transfer protein TrbE | - |
| EGY17_RS00130 () | 17857..18600 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EGY17_RS00135 () | 18614..18955 | + | 342 | WP_000556794.1 | conjugal transfer protein TrbA | - |
| EGY17_RS00140 () | 18936..19271 | - | 336 | WP_000415571.1 | hypothetical protein | - |
| EGY17_RS00145 () | 19352..19636 | + | 285 | WP_000624105.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EGY17_RS00150 () | 19623..20177 | + | 555 | WP_001553830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EGY17_RS00155 () | 20107..20480 | + | 374 | Protein_31 | P-type conjugative transfer protein TrbJ | - |
| EGY17_RS00160 () | 20434..20826 | + | 393 | WP_001553828.1 | F-type conjugal transfer protein TrbF | - |
| EGY17_RS00165 () | 20813..22186 | + | 1374 | WP_001553827.1 | conjugal transfer protein TraH | - |
| EGY17_RS00170 () | 22183..25008 | + | 2826 | WP_001553826.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EGY17_RS00175 () | 25005..25460 | + | 456 | WP_001553825.1 | conjugal transfer entry exclusion protein TraS | - |
| EGY17_RS00180 () | 25529..26260 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| EGY17_RS00185 () | 26512..28683 | + | 2172 | WP_012372807.1 | type IV conjugative transfer system coupling protein TraD | - |
| EGY17_RS00190 () | 28683..33953 | + | 5271 | WP_078207905.1 | conjugative transfer relaxase/helicase TraI | - |
| EGY17_RS00195 () | 33973..34719 | + | 747 | WP_000205701.1 | conjugal transfer pilus acetylase TraX | - |
| EGY17_RS00200 () | 34774..35334 | + | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| EGY17_RS00205 () | 35467..35679 | + | 213 | WP_005012601.1 | hypothetical protein | - |
| EGY17_RS00215 () | 35980..36686 | - | 707 | Protein_42 | IS1 family transposase | - |
| EGY17_RS00220 () | 36787..36969 | + | 183 | WP_000968309.1 | hypothetical protein | - |
| - () | 37108..37169 | - | 62 | NuclAT_1 | - | - |
| - () | 37108..37169 | - | 62 | NuclAT_1 | - | - |
| - () | 37108..37169 | - | 62 | NuclAT_1 | - | - |
| - () | 37108..37169 | - | 62 | NuclAT_1 | - | - |
| EGY17_RS00230 () | 37156..37362 | + | 207 | WP_015387399.1 | type I toxin-antitoxin system Hok family toxin | - |
| EGY17_RS00235 () | 37646..37903 | + | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| EGY17_RS00245 () | 38139..38213 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EGY17_RS00250 () | 38206..38652 | + | 447 | Protein_47 | incFII family plasmid replication initiator RepA | - |
| EGY17_RS00255 () | 38598..39080 | - | 483 | Protein_48 | VENN motif pre-toxin domain-containing protein | - |
| EGY17_RS00260 () | 39973..41193 | + | 1221 | WP_000410951.1 | arginine deiminase | - |
| EGY17_RS00265 () | 41204..42115 | + | 912 | WP_000440183.1 | carbamate kinase | - |
| EGY17_RS00270 () | 42200..43204 | + | 1005 | WP_000154544.1 | ornithine carbamoyltransferase | - |
| EGY17_RS00275 () | 43252..44655 | + | 1404 | WP_000514417.1 | YfcC family protein | - |
| EGY17_RS00280 () | 44736..45215 | + | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| EGY17_RS00285 () | 45279..45620 | - | 342 | Protein_54 | transposase | - |
| EGY17_RS00290 () | 45572..45793 | - | 222 | WP_000080217.1 | hypothetical protein | - |
| EGY17_RS00295 () | 45824..46174 | - | 351 | WP_000624725.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EGY17_RS00300 () | 46171..46533 | - | 363 | WP_059330006.1 | IS66 family insertion sequence hypothetical protein | - |
| EGY17_RS00305 () | 46642..47335 | - | 694 | Protein_58 | IS1 family transposase | - |
| EGY17_RS00310 () | 47368..47946 | + | 579 | WP_032147503.1 | DUF2726 domain-containing protein | - |
| EGY17_RS00315 () | 48359..48712 | - | 354 | WP_000005489.1 | hypothetical protein | - |
| EGY17_RS00320 () | 49184..50206 | - | 1023 | WP_000156883.1 | IS110 family transposase | - |
| EGY17_RS00330 () | 50611..50868 | + | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| EGY17_RS00340 () | 51104..51178 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EGY17_RS00345 () | 51171..52028 | + | 858 | WP_000130948.1 | incFII family plasmid replication initiator RepA | - |
| EGY17_RS00355 () | 52967..53620 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| EGY17_RS00360 () | 53713..53970 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| EGY17_RS00365 () | 53903..54304 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| EGY17_RS00370 () | 54553..54968 | + | 416 | Protein_68 | IS1 family transposase | - |
| EGY17_RS00375 () | 55004..55549 | - | 546 | Protein_69 | Tn3 family transposase | - |
| EGY17_RS00380 () | 55615..56319 | - | 705 | WP_001067834.1 | IS6-like element IS26 family transposase | - |
| EGY17_RS00385 () | 56454..56549 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| EGY17_RS00390 () | 56675..57412 | + | 738 | WP_013362818.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | - |
| EGY17_RS27475 () | 57357..57527 | + | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| EGY17_RS00400 () | 58042..58491 | + | 450 | WP_013362817.1 | hypothetical protein | - |
| EGY17_RS27480 () | 58452..58793 | + | 342 | WP_023909256.1 | chaperonin | - |
| EGY17_RS00410 () | 59020..60552 | + | 1533 | WP_013362816.1 | IS91 family transposase | - |
| EGY17_RS00420 () | 60875..61579 | - | 705 | WP_001067834.1 | IS6-like element IS26 family transposase | - |
| EGY17_RS00425 () | 61604..62800 | + | 1197 | Protein_78 | IS3 family transposase | - |
| EGY17_RS00430 () | 62822..63055 | + | 234 | Protein_79 | Tn3 family transposase | - |
| EGY17_RS00435 () | 63132..63440 | + | 309 | Protein_80 | IS4 family transposase | - |
| EGY17_RS00440 () | 63499..64809 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| EGY17_RS00445 () | 64802..65875 | - | 1074 | WP_000950177.1 | ABC transporter ATP-binding protein | - |
| EGY17_RS00450 () | 65881..66705 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| EGY17_RS00455 () | 66716..67603 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| EGY17_RS00460 () | 67593..68471 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| EGY17_RS00465 () | 68602..69042 | - | 441 | Protein_86 | zinc-binding dehydrogenase | - |
| EGY17_RS00475 () | 69443..70333 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| EGY17_RS00480 () | 70358..70738 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| EGY17_RS00485 () | 70771..71736 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| EGY17_RS00490 () | 71782..72534 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| EGY17_RS00495 () | 73139..73423 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EGY17_RS00500 () | 73423..73698 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGY17_RS00505 () | 73814..74511 | - | 698 | Protein_93 | IS1 family transposase | - |
| EGY17_RS00510 () | 74581..74874 | + | 294 | WP_001105060.1 | hypothetical protein | - |
| EGY17_RS00515 () | 74909..75037 | - | 129 | Protein_95 | IS481 family transposase | - |
| EGY17_RS00520 () | 75070..76239 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| EGY17_RS00530 () | 76732..77039 | + | 308 | Protein_97 | type II toxin-antitoxin system ParD family antitoxin | - |
| EGY17_RS00540 () | 77382..77564 | + | 183 | WP_042065278.1 | hypothetical protein | - |
| EGY17_RS00545 () | 77685..78425 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| EGY17_RS00550 () | 78710..79687 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| EGY17_RS27485 () | 80808..81203 | + | 396 | WP_175188304.1 | hypothetical protein | - |
| EGY17_RS00565 () | 81690..82387 | + | 698 | Protein_102 | IS1 family transposase | - |
| EGY17_RS00570 () | 82403..82732 | + | 330 | Protein_103 | TOBE domain-containing protein | - |
| EGY17_RS00575 () | 82841..83773 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| EGY17_RS00580 () | 83760..85163 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| EGY17_RS00585 () | 85407..86387 | + | 981 | WP_000019407.1 | IS5-like element IS5 family transposase | - |
| EGY17_RS00590 () | 86615..86932 | + | 318 | WP_001513659.1 | hypothetical protein | - |
| EGY17_RS00595 () | 86882..87295 | - | 414 | Protein_108 | DDE-type integrase/transposase/recombinase | - |
| EGY17_RS00600 () | 87219..87578 | - | 360 | WP_001513660.1 | hypothetical protein | - |
| EGY17_RS00605 () | 87606..87785 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| EGY17_RS00610 () | 87790..88170 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| EGY17_RS00615 () | 88170..88391 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| EGY17_RS00620 () | 88574..90130 | + | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| EGY17_RS00625 () | 90127..91410 | + | 1284 | WP_001553855.1 | restriction endonuclease subunit S | - |
| EGY17_RS00630 () | 91532..94648 | + | 3117 | WP_123907661.1 | HsdR family type I site-specific deoxyribonuclease | - |
| EGY17_RS00635 () | 94862..95559 | + | 698 | Protein_116 | IS1 family transposase | - |
| EGY17_RS00640 () | 95696..96628 | - | 933 | WP_000991832.1 | hypothetical protein | - |
| EGY17_RS00645 () | 96632..97627 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| EGY17_RS00650 () | 98092..100230 | + | 2139 | WP_000350635.1 | AAA family ATPase | - |
| EGY17_RS00655 () | 100392..100808 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EGY17_RS00660 () | 100805..101035 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EGY17_RS00670 () | 101342..104461 | + | 3120 | WP_001553851.1 | hypothetical protein | - |
| EGY17_RS00675 () | 104724..105857 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| EGY17_RS00680 () | 105877..106161 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| EGY17_RS00685 () | 106158..106355 | - | 198 | WP_000215657.1 | hypothetical protein | - |
| EGY17_RS00700 () | 106989..107207 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EGY17_RS00705 () | 107209..107514 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EGY17_RS00710 () | 107515..108321 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| EGY17_RS00715 () | 109095..109850 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| EGY17_RS00720 () | 110438..111604 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| EGY17_RS00725 () | 111604..112575 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EGY17_RS00740 () | 113442..114344 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| EGY17_RS00745 () | 114348..114652 | + | 305 | Protein_133 | hypothetical protein | - |
| EGY17_RS00750 () | 114729..115412 | + | 684 | WP_000086185.1 | DNA methylase | - |
| EGY17_RS00755 () | 115413..115634 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| EGY17_RS00760 () | 115648..116082 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| EGY17_RS00765 () | 116133..116909 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| EGY17_RS00775 () | 117449..117751 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| EGY17_RS00780 () | 117798..118220 | + | 423 | WP_078207907.1 | DUF1380 family protein | - |
| EGY17_RS00785 () | 118217..118408 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| EGY17_RS00790 () | 118722..120389 | - | 1668 | WP_001091724.1 | group II intron reverse transcriptase/maturase | - |
| EGY17_RS00810 () | 121786..122016 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| EGY17_RS00815 () | 122068..123429 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| EGY17_RS00820 () | 123477..124040 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| EGY17_RS27490 () | 124125..124304 | - | 180 | Protein_145 | pilus protein | - |
| EGY17_RS00830 () | 124417..126084 | - | 1668 | WP_001091724.1 | group II intron reverse transcriptase/maturase | - |
| EGY17_RS00845 () | 126760..128427 | - | 1668 | WP_001091724.1 | group II intron reverse transcriptase/maturase | - |
| EGY17_RS00870 () | 130089..130664 | - | 576 | WP_123907664.1 | hypothetical protein | - |
| EGY17_RS00880 () | 131968..132726 | + | 759 | Protein_150 | site-specific integrase | - |
| EGY17_RS00885 () | 132884..133894 | + | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| EGY17_RS00890 () | 133990..136116 | + | 2127 | WP_000253905.1 | alpha-galactosidase | - |
| EGY17_RS00895 () | 136179..137456 | + | 1278 | WP_001083369.1 | MFS transporter | - |
| EGY17_RS00900 () | 137453..138886 | + | 1434 | WP_024170639.1 | glycoside hydrolase family 32 protein | - |
| EGY17_RS00905 () | 139081..140475 | + | 1395 | WP_001037799.1 | carbohydrate porin | - |
| EGY17_RS00915 () | 140721..140825 | - | 105 | Protein_156 | thiosulfate reductase cytochrome B subunit | - |
| EGY17_RS00920 () | 140882..141575 | + | 694 | Protein_157 | IS1 family transposase | - |
| EGY17_RS00925 () | 141591..142214 | + | 624 | WP_000912556.1 | potassium channel family protein | - |
| EGY17_RS00930 () | 142299..142550 | + | 252 | Protein_159 | iron-containing alcohol dehydrogenase | - |
| EGY17_RS00935 () | 142839..143156 | - | 318 | Protein_160 | IS110 family transposase | - |
| EGY17_RS00940 () | 143311..143416 | + | 106 | Protein_161 | plasmid SOS inhibition protein A | - |
| - () | 143385..143583 | + | 199 | NuclAT_0 | - | - |
| - () | 143385..143583 | + | 199 | NuclAT_0 | - | - |
| - () | 143385..143583 | + | 199 | NuclAT_0 | - | - |
| - () | 143385..143583 | + | 199 | NuclAT_0 | - | - |
| EGY17_RS00945 () | 143648..143806 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|