MGE detailed information
MGE type: Conjugative plasmid MGE length: 127175 bp
Accession: NZ_CP033743 Location: 1..127175 Organism: Citrobacter freundii strain FDAARGOS_549 Replicon: plasmid unnamed
Accession: NZ_CP033743 Location: 1..127175 Organism: Citrobacter freundii strain FDAARGOS_549 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX89_RS00010 () | 1755..2294 | - | 540 | WP_040231190.1 | hypothetical protein | - |
| EGX89_RS00015 () | 2335..2622 | - | 288 | WP_040231189.1 | hypothetical protein | - |
| EGX89_RS00020 () | 2619..3779 | - | 1161 | WP_123924624.1 | plasmid transfer ATPase TraJ | - |
| EGX89_RS00025 () | 3791..4597 | - | 807 | WP_040231187.1 | type IV secretory system conjugative DNA transfer family protein | - |
| EGX89_RS00030 () | 4594..5067 | - | 474 | WP_040231184.1 | DotD/TraH family lipoprotein | - |
| EGX89_RS00035 () | 5200..6408 | - | 1209 | WP_040231181.1 | conjugal transfer protein TraF | - |
| EGX89_RS00040 () | 6511..7347 | - | 837 | WP_040231179.1 | hypothetical protein | - |
| EGX89_RS00045 () | 7492..7968 | - | 477 | WP_123924625.1 | hypothetical protein | - |
| EGX89_RS00050 () | 7988..9148 | - | 1161 | WP_040231242.1 | site-specific integrase | - |
| EGX89_RS00055 () | 9863..10894 | - | 1032 | WP_123924626.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| EGX89_RS00060 () | 10891..11565 | - | 675 | WP_123924627.1 | prepilin peptidase | - |
| EGX89_RS00065 () | 11550..12032 | - | 483 | WP_123924696.1 | lytic transglycosylase domain-containing protein | - |
| EGX89_RS00070 () | 12117..12731 | - | 615 | WP_052463753.1 | pilus assembly protein PilX | - |
| EGX89_RS00075 () | 12745..13839 | - | 1095 | WP_123924697.1 | type II secretion system F family protein | - |
| EGX89_RS00080 () | 13832..15391 | - | 1560 | WP_040231336.1 | Flp pilus assembly complex ATPase component TadA | - |
| EGX89_RS00085 () | 15394..15894 | - | 501 | WP_052463752.1 | type IV pilus biogenesis protein PilP | - |
| EGX89_RS00090 () | 15878..17182 | - | 1305 | WP_123924628.1 | type 4b pilus protein PilO2 | - |
| EGX89_RS00095 () | 17184..18860 | - | 1677 | WP_040231333.1 | PilN family type IVB pilus formation outer membrane protein | - |
| EGX89_RS00100 () | 18875..19312 | - | 438 | WP_040231354.1 | type IV pilus biogenesis protein PilM | - |
| EGX89_RS00105 () | 19312..20397 | - | 1086 | WP_123924629.1 | TcpQ domain-containing protein | - |
| EGX89_RS00110 () | 20413..20916 | - | 504 | WP_040231331.1 | hypothetical protein | - |
| EGX89_RS00115 () | 20976..21551 | - | 576 | WP_123924630.1 | hypothetical protein | - |
| EGX89_RS00120 () | 21582..22160 | - | 579 | WP_040231329.1 | hypothetical protein | - |
| EGX89_RS00125 () | 22263..22633 | - | 371 | Protein_24 | SPFH/Band 7/PHB domain protein | - |
| EGX89_RS00130 () | 22727..23455 | - | 729 | WP_123924631.1 | hypothetical protein | - |
| EGX89_RS00135 () | 23642..24151 | - | 510 | WP_123924632.1 | transcription termination factor NusG | - |
| EGX89_RS00140 () | 24440..24700 | - | 261 | WP_123924633.1 | hypothetical protein | - |
| EGX89_RS00145 () | 25300..25500 | + | 201 | WP_072041444.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| EGX89_RS00150 () | 25807..26691 | + | 885 | WP_123924634.1 | incFII family plasmid replication initiator RepA | - |
| EGX89_RS00155 () | 27853..28890 | + | 1038 | WP_123924635.1 | acyltransferase | - |
| EGX89_RS00160 () | 28937..29266 | - | 330 | WP_123924636.1 | hypothetical protein | - |
| EGX89_RS00165 () | 29601..31133 | + | 1533 | WP_123924637.1 | phosphoethanolamine transferase | - |
| EGX89_RS00170 () | 31525..31998 | - | 474 | WP_040231320.1 | thermonuclease family protein | - |
| EGX89_RS00175 () | 31995..32675 | - | 681 | WP_123924638.1 | hypothetical protein | - |
| EGX89_RS00180 () | 32672..33931 | - | 1260 | WP_123924639.1 | hypothetical protein | - |
| EGX89_RS00185 () | 33921..34163 | - | 243 | WP_123924640.1 | hypothetical protein | - |
| EGX89_RS00190 () | 34601..36184 | - | 1584 | WP_123924641.1 | ATP-binding protein | - |
| EGX89_RS00195 () | 36184..37096 | - | 913 | Protein_38 | replication initiation protein | - |
| EGX89_RS00200 () | 37875..38843 | - | 969 | WP_172960220.1 | hypothetical protein | - |
| EGX89_RS00205 () | 39076..39570 | - | 495 | WP_123924698.1 | hypothetical protein | - |
| EGX89_RS00210 () | 39879..40493 | - | 615 | WP_123924643.1 | DNA-binding protein | - |
| EGX89_RS00220 () | 40797..41057 | + | 261 | WP_013087106.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| EGX89_RS00225 () | 41044..41340 | + | 297 | WP_013087107.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EGX89_RS00230 () | 41560..41994 | - | 435 | WP_000723069.1 | copper resistance system metallochaperone PcoE | - |
| EGX89_RS00235 () | 42212..43612 | - | 1401 | WP_123924644.1 | copper resistance membrane spanning protein PcoS | - |
| EGX89_RS00240 () | 43609..44289 | - | 681 | WP_001188930.1 | copper response regulator transcription factor PcoR | - |
| EGX89_RS00245 () | 44344..45273 | - | 930 | WP_123924645.1 | copper resistance inner membrane protein PcoD | - |
| EGX89_RS00250 () | 45278..45658 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| EGX89_RS00255 () | 45698..46588 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| EGX89_RS00260 () | 46594..48411 | - | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| EGX89_RS00270 () | 48646..49095 | + | 450 | WP_032662214.1 | hypothetical protein | - |
| EGX89_RS00275 () | 49384..50121 | + | 738 | WP_004388332.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| EGX89_RS00280 () | 50155..50352 | - | 198 | WP_004388331.1 | DUF2933 domain-containing protein | - |
| EGX89_RS00285 () | 50393..52834 | - | 2442 | WP_123924646.1 | Ag(+)-translocating P-type ATPase SilP | - |
| EGX89_RS00290 () | 52962..53402 | - | 441 | WP_000720618.1 | hypothetical protein | - |
| EGX89_RS00295 () | 53488..56634 | - | 3147 | WP_047070876.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| EGX89_RS00300 () | 56645..57937 | - | 1293 | WP_123924647.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| EGX89_RS00305 () | 58051..58404 | - | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| EGX89_RS00310 () | 58433..59818 | - | 1386 | WP_000475512.1 | Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC | - |
| EGX89_RS00315 () | 60008..60688 | + | 681 | WP_001572351.1 | copper/silver response regulator transcription factor SilR | - |
| EGX89_RS00320 () | 60681..62156 | + | 1476 | WP_123924648.1 | copper/silver sensor histidine kinase SilS | - |
| EGX89_RS00325 () | 62407..62838 | + | 432 | WP_123924649.1 | silver-binding protein SilE | - |
| EGX89_RS00330 () | 62985..63335 | + | 351 | WP_032662182.1 | DUF305 domain-containing protein | - |
| EGX89_RS00335 () | 63521..64429 | - | 909 | WP_032662179.1 | HNH endonuclease | - |
| EGX89_RS00345 () | 64977..65999 | - | 1023 | WP_123924651.1 | DNA helicase UvrD | - |
| EGX89_RS00350 () | 65984..67546 | - | 1563 | WP_040119797.1 | AAA family ATPase | - |
| EGX89_RS00355 () | 67620..68030 | - | 411 | WP_032662169.1 | PIN domain-containing protein | Toxin Detail |
| EGX89_RS00360 () | 68027..68257 | - | 231 | WP_032662167.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EGX89_RS00370 () | 69114..69419 | + | 306 | WP_123924652.1 | hypothetical protein | - |
| EGX89_RS00375 () | 69506..70114 | + | 609 | WP_123924653.1 | hypothetical protein | - |
| EGX89_RS00380 () | 70173..70952 | + | 780 | WP_123924654.1 | site-specific integrase | - |
| EGX89_RS00385 () | 71237..71446 | + | 210 | WP_123924655.1 | hypothetical protein | - |
| EGX89_RS00390 () | 71926..72237 | - | 312 | WP_123924656.1 | hypothetical protein | - |
| EGX89_RS00395 () | 72624..72917 | - | 294 | WP_123924657.1 | hypothetical protein | - |
| EGX89_RS00400 () | 73022..73303 | - | 282 | WP_123924658.1 | CopG family transcriptional regulator | - |
| EGX89_RS00405 () | 73303..73941 | - | 639 | WP_123924659.1 | AAA family ATPase | - |
| EGX89_RS00410 () | 74177..75148 | + | 972 | WP_123924660.1 | plasmid segregation protein parM | - |
| EGX89_RS00415 () | 75153..75542 | + | 390 | WP_123924661.1 | plasmid stability protein | - |
| EGX89_RS00420 () | 75546..76817 | - | 1272 | WP_123924662.1 | Y-family DNA polymerase | - |
| EGX89_RS00425 () | 76817..77245 | - | 429 | WP_040231294.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EGX89_RS00430 () | 77536..77961 | + | 426 | WP_123924663.1 | hypothetical protein | - |
| EGX89_RS00435 () | 78315..78776 | + | 462 | WP_123924664.1 | hypothetical protein | - |
| EGX89_RS00440 () | 79469..80248 | + | 780 | WP_123924665.1 | hypothetical protein | - |
| EGX89_RS00445 () | 80647..81156 | + | 510 | WP_123924666.1 | antirestriction protein ArdA | - |
| EGX89_RS00450 () | 81199..81387 | + | 189 | WP_115490275.1 | hypothetical protein | - |
| EGX89_RS00455 () | 82236..82568 | + | 333 | WP_123924667.1 | DUF905 family protein | - |
| EGX89_RS00460 () | 82636..84624 | + | 1989 | WP_123924668.1 | ParB/RepB/Spo0J family partition protein | - |
| EGX89_RS00465 () | 84668..85093 | + | 426 | WP_123924669.1 | conjugation system SOS inhibitor PsiB | - |
| EGX89_RS00470 () | 85090..85824 | + | 735 | WP_040231236.1 | plasmid SOS inhibition protein A | - |
| EGX89_RS00475 () | 85821..86057 | + | 237 | WP_040231234.1 | hypothetical protein | - |
| EGX89_RS00480 () | 86365..87705 | + | 1341 | WP_123924670.1 | ISNCY family transposase | - |
| EGX89_RS00485 () | 88226..89107 | + | 882 | WP_123924671.1 | hypothetical protein | - |
| EGX89_RS00490 () | 89331..90116 | - | 786 | WP_123924672.1 | hypothetical protein | - |
| EGX89_RS00495 () | 90549..91244 | + | 696 | WP_123924673.1 | DJ-1/PfpI family protein | - |
| EGX89_RS00500 () | 91413..91652 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EGX89_RS00505 () | 91652..91939 | + | 288 | WP_032611731.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGX89_RS00510 () | 92010..92168 | + | 159 | WP_040231232.1 | type I toxin-antitoxin system Hok family toxin | - |
| EGX89_RS00520 () | 93071..93427 | + | 357 | WP_123924674.1 | hypothetical protein | - |
| EGX89_RS00525 () | 93470..94288 | + | 819 | WP_087879592.1 | N-6 DNA methylase | - |
| EGX89_RS00530 () | 94368..94859 | + | 492 | WP_048227660.1 | antirestriction protein | - |
| EGX89_RS00535 () | 94904..95227 | + | 324 | WP_123924675.1 | DUF957 domain-containing protein | - |
| EGX89_RS00540 () | 95190..95447 | - | 258 | WP_040231225.1 | helix-turn-helix transcriptional regulator | - |
| EGX89_RS00550 () | 96202..96348 | + | 147 | WP_048227658.1 | hypothetical protein | - |
| EGX89_RS00555 () | 96403..96972 | + | 570 | WP_123924677.1 | hypothetical protein | - |
| EGX89_RS00560 () | 97379..98212 | + | 834 | WP_123924678.1 | DUF945 domain-containing protein | - |
| EGX89_RS00565 () | 98292..98600 | - | 309 | WP_123924679.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| EGX89_RS00570 () | 98831..99166 | + | 336 | WP_123924680.1 | nikA protein | - |
| EGX89_RS00575 () | 99188..101887 | + | 2700 | WP_123924681.1 | relaxase/mobilization nuclease domain-containing protein | - |
| EGX89_RS00580 () | 101980..102213 | + | 234 | WP_040231217.1 | hypothetical protein | - |
| EGX89_RS00585 () | 102234..102749 | + | 516 | WP_167335593.1 | type II toxin-antitoxin system YafO family toxin | - |
| EGX89_RS00590 () | 102811..103080 | - | 270 | WP_123924682.1 | hypothetical protein | - |
| EGX89_RS00595 () | 103153..105453 | - | 2301 | WP_123924683.1 | TraM recognition domain-containing protein | - |
| EGX89_RS00600 () | 105457..106644 | - | 1188 | WP_123924684.1 | hypothetical protein | - |
| EGX89_RS00605 () | 106697..107905 | - | 1209 | WP_123924685.1 | conjugal transfer protein TrbA | - |
| EGX89_RS00610 () | 108216..108848 | - | 633 | WP_123924686.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EGX89_RS00615 () | 108910..111072 | - | 2163 | WP_123924687.1 | DotA/TraY family protein | - |
| EGX89_RS00620 () | 111130..111672 | - | 543 | WP_072041438.1 | conjugal transfer protein TraX | - |
| EGX89_RS00625 () | 111669..112871 | - | 1203 | WP_123924689.1 | conjugal transfer protein TraW | - |
| EGX89_RS24840 () | 112884..113453 | - | 570 | WP_172960221.1 | conjugal transfer protein TraV | - |
| EGX89_RS00630 () | 113453..116506 | - | 3054 | WP_040231206.1 | conjugal transfer protein | - |
| EGX89_RS00635 () | 116586..117818 | + | 1233 | WP_123924690.1 | hypothetical protein | - |
| EGX89_RS00640 () | 118117..118935 | - | 819 | WP_123924691.1 | conjugal transfer protein TraT | - |
| EGX89_RS00645 () | 118981..119385 | - | 405 | WP_040231201.1 | hypothetical protein | - |
| EGX89_RS00650 () | 119419..119943 | - | 525 | WP_040231200.1 | conjugal transfer protein TraQ | - |
| EGX89_RS00655 () | 119943..120716 | - | 774 | WP_123924692.1 | conjugal transfer protein TraP | - |
| EGX89_RS00660 () | 120697..122013 | - | 1317 | WP_123924693.1 | conjugal transfer protein TraO | - |
| EGX89_RS00665 () | 122013..122996 | - | 984 | WP_123924694.1 | conjugal transfer protein TraN | - |
| EGX89_RS00670 () | 123007..123708 | - | 702 | WP_040231195.1 | DotI/IcmL/TraM family protein | - |
| EGX89_RS00675 () | 123714..124052 | - | 339 | WP_123924699.1 | conjugal transfer protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|