MGE detailed information
MGE type: Conjugative plasmid MGE length: 82252 bp
Accession: NZ_CP033634 Location: 1..82252 Organism: Escherichia coli isolate ECCNB12-2 Replicon: plasmid pTB-nb3
Accession: NZ_CP033634 Location: 1..82252 Organism: Escherichia coli isolate ECCNB12-2 Replicon: plasmid pTB-nb3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CQP61_RS01960 () | 1320..6589 | + | 5270 | Protein_1 | Multifunctional conjugation protein TraI | Relaxase |
| CQP61_RS01965 () | 6609..7355 | + | 747 | WP_021534916.1 | conjugal transfer pilus acetylase TraX | - |
| CQP61_RS01970 () | 7410..7970 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| CQP61_RS01975 () | 8101..8313 | + | 213 | WP_032161968.1 | hypothetical protein | - |
| CQP61_RS01980 () | 8558..9019 | + | 462 | WP_053287835.1 | thermonuclease family protein | - |
| CQP61_RS01985 () | 9065..9274 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| CQP61_RS01990 () | 9312..9902 | + | 591 | WP_053287836.1 | DUF2726 domain-containing protein | - |
| CQP61_RS01995 () | 10057..10506 | + | 450 | WP_053287837.1 | hypothetical protein | - |
| - () | 10673..10729 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 10673..10729 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 10673..10729 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 10673..10729 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| CQP61_RS02005 () | 10721..10927 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CQP61_RS02010 () | 11211..11471 | + | 261 | WP_021536205.1 | replication regulatory protein RepA | - |
| CQP61_RS02020 () | 11707..11781 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CQP61_RS02025 () | 11774..12631 | + | 858 | WP_021534913.1 | incFII family plasmid replication initiator RepA | - |
| CQP61_RS02035 () | 13331..13537 | + | 207 | WP_121832032.1 | hypothetical protein | - |
| CQP61_RS02040 () | 13594..13929 | + | 336 | WP_001147117.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CQP61_RS02045 () | 13926..14276 | + | 351 | WP_000127480.1 | addiction module antitoxin | - |
| CQP61_RS02055 () | 14995..15618 | + | 624 | WP_021536204.1 | hypothetical protein | - |
| CQP61_RS02060 () | 15700..15879 | - | 180 | Protein_17 | PerC family transcriptional regulator | - |
| CQP61_RS02065 () | 15900..18866 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CQP61_RS02070 () | 18952..19656 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CQP61_RS02075 () | 19709..19870 | + | 162 | Protein_20 | transposase | - |
| CQP61_RS02080 () | 19922..20626 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CQP61_RS02085 () | 20651..22228 | + | 1578 | WP_123891609.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| CQP61_RS02090 () | 22219..23427 | - | 1209 | WP_000343728.1 | IS256 family transposase IS1414 | Transposase |
| CQP61_RS31370 () | 23824..24558 | + | 735 | WP_064764482.1 | helix-turn-helix domain-containing protein | - |
| CQP61_RS02105 () | 24875..25804 | - | 930 | WP_121832151.1 | haloacid dehalogenase-like hydrolase | - |
| CQP61_RS02110 () | 25801..27198 | - | 1398 | WP_121832149.1 | N-acetylglucosamine-specific PTS transporter subunit IIBC | - |
| CQP61_RS02115 () | 27432..28181 | + | 750 | WP_086795518.1 | GntR family transcriptional regulator | - |
| CQP61_RS02120 () | 28269..28511 | - | 243 | Protein_28 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CQP61_RS31375 () | 28719..29021 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| CQP61_RS02130 () | 29018..29644 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CQP61_RS02135 () | 29848..31026 | - | 1179 | Protein_31 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CQP61_RS02140 () | 31435..32523 | - | 1089 | WP_121832159.1 | hypothetical protein | - |
| CQP61_RS02145 () | 32959..34059 | + | 1101 | WP_031619804.1 | DUF4935 domain-containing protein | - |
| CQP61_RS02150 () | 34061..34528 | + | 468 | Protein_34 | hypothetical protein | - |
| CQP61_RS02155 () | 34621..35849 | + | 1229 | WP_164473239.1 | IS3 family transposase IS2 | Transposase |
| CQP61_RS02160 () | 35958..36056 | - | 99 | Protein_36 | hypothetical protein | - |
| CQP61_RS02165 () | 36056..36493 | - | 438 | WP_121832232.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CQP61_RS02170 () | 36490..36738 | - | 249 | WP_000619113.1 | DinI-like family protein | - |
| CQP61_RS02180 () | 37039..37281 | + | 243 | WP_121832131.1 | hypothetical protein | - |
| CQP61_RS02185 () | 37379..38395 | + | 1017 | WP_023278197.1 | IS110 family transposase ISShdy1 | Transposase |
| CQP61_RS02195 () | 39092..39775 | + | 684 | WP_121832125.1 | DNA methylase | - |
| CQP61_RS02200 () | 39776..39997 | + | 222 | WP_001104892.1 | hypothetical protein | - |
| CQP61_RS02205 () | 40010..40444 | + | 435 | WP_032331153.1 | DUF1380 family protein | - |
| CQP61_RS02210 () | 40463..41032 | + | 570 | Protein_44 | hypothetical protein | - |
| CQP61_RS02220 () | 41572..41874 | + | 303 | WP_123891610.1 | antirestriction protein | - |
| CQP61_RS02225 () | 41921..42343 | + | 423 | WP_021534897.1 | DUF1380 family protein | - |
| CQP61_RS02230 () | 42340..42531 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CQP61_RS31380 () | 42804..43028 | - | 225 | WP_001427866.1 | hypothetical protein | - |
| CQP61_RS02240 () | 43571..43801 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CQP61_RS02245 () | 43853..45214 | + | 1362 | WP_121832129.1 | DUF3560 domain-containing protein | - |
| CQP61_RS02250 () | 45261..45824 | + | 564 | WP_021534895.1 | class I SAM-dependent methyltransferase | - |
| CQP61_RS31385 () | 45976..46230 | + | 255 | WP_164473240.1 | hypothetical protein | - |
| CQP61_RS02270 () | 46701..47228 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| CQP61_RS02275 () | 47284..47517 | + | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| CQP61_RS02280 () | 47581..49539 | + | 1959 | WP_123891607.1 | ParB/RepB/Spo0J family partition protein | - |
| CQP61_RS02285 () | 49594..50028 | + | 435 | WP_123891611.1 | conjugation system SOS inhibitor PsiB | - |
| CQP61_RS02290 () | 50025..50744 | + | 720 | WP_086624612.1 | plasmid SOS inhibition protein A | - |
| CQP61_RS31395 () | 50756..50944 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 50756..50980 | + | 225 | NuclAT_0 | - | - |
| - () | 50756..50980 | + | 225 | NuclAT_0 | - | - |
| - () | 50756..50980 | + | 225 | NuclAT_0 | - | - |
| - () | 50756..50980 | + | 225 | NuclAT_0 | - | - |
| - () | 50913..50978 | + | 66 | - | - | Antitoxin Detail |
| CQP61_RS02295 () | 51024..51182 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CQP61_RS31675 () | 51477..51803 | + | 327 | WP_183129667.1 | hypothetical protein | - |
| CQP61_RS02310 () | 52123..52320 | + | 198 | WP_045174704.1 | hypothetical protein | - |
| CQP61_RS02315 () | 52439..53260 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| CQP61_RS02320 () | 53557..54147 | - | 591 | WP_165850686.1 | hypothetical protein | VF |
| CQP61_RS02325 () | 54490..54873 | + | 384 | WP_001151565.1 | relaxosome protein TraM | - |
| CQP61_RS02330 () | 55067..55753 | + | 687 | WP_072649631.1 | PAS domain-containing protein | - |
| CQP61_RS02335 () | 55847..56074 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| CQP61_RS02340 () | 56108..56467 | + | 360 | WP_021534888.1 | type IV conjugative transfer system pilin TraA | - |
| CQP61_RS02345 () | 56482..56793 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| CQP61_RS02350 () | 56815..57381 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| CQP61_RS02355 () | 57392..58096 | + | 705 | WP_148723212.1 | type-F conjugative transfer system secretin TraK | - |
| CQP61_RS02360 () | 58096..59523 | + | 1428 | WP_023352033.1 | conjugal transfer protein TraB | - |
| CQP61_RS02365 () | 59513..60097 | + | 585 | WP_121832048.1 | conjugal transfer protein TraP | - |
| CQP61_RS02370 () | 60036..60404 | + | 369 | WP_071550054.1 | conjugal transfer protein TrbD | - |
| CQP61_RS02375 () | 60397..60648 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| CQP61_RS02380 () | 60645..61160 | + | 516 | WP_000809891.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CQP61_RS02385 () | 61295..61516 | + | 222 | WP_001278682.1 | conjugal transfer protein TraR | - |
| CQP61_RS02390 () | 61509..61982 | + | 474 | WP_053287735.1 | hypothetical protein | - |
| CQP61_RS02395 () | 62062..62276 | + | 215 | Protein_78 | hypothetical protein | - |
| CQP61_RS02400 () | 62304..62666 | + | 363 | WP_021534936.1 | hypothetical protein | - |
| CQP61_RS02405 () | 62792..65422 | + | 2631 | WP_021534935.1 | type IV secretion system protein TraC | - |
| CQP61_RS02410 () | 65419..65805 | + | 387 | WP_021536235.1 | type-F conjugative transfer system protein TrbI | - |
| CQP61_RS02415 () | 65802..66434 | + | 633 | WP_053287734.1 | type-F conjugative transfer system protein TraW | - |
| CQP61_RS02420 () | 66431..67423 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| CQP61_RS02430 () | 67826..68346 | + | 521 | Protein_84 | hypothetical protein | - |
| CQP61_RS02435 () | 68373..69011 | + | 639 | WP_053287731.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CQP61_RS02440 () | 69008..69379 | + | 372 | WP_021534930.1 | hypothetical protein | - |
| CQP61_RS02445 () | 69404..69826 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| CQP61_RS02450 () | 69823..71673 | + | 1851 | WP_053287730.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CQP61_RS31680 () | 71700..71953 | + | 254 | Protein_89 | conjugal transfer protein TrbE | - |
| CQP61_RS02455 () | 71946..72689 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CQP61_RS02460 () | 72705..73052 | + | 348 | WP_021534925.1 | conjugal transfer protein TrbA | - |
| CQP61_RS02465 () | 73054..73368 | - | 315 | WP_021534924.1 | hypothetical protein | - |
| CQP61_RS02470 () | 73449..73733 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CQP61_RS02475 () | 73720..74265 | + | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CQP61_RS02480 () | 74195..74569 | + | 375 | WP_072157183.1 | P-type conjugative transfer protein TrbJ | - |
| CQP61_RS02485 () | 74523..74915 | + | 393 | WP_053287728.1 | F-type conjugal transfer protein TrbF | - |
| CQP61_RS02490 () | 74902..76275 | + | 1374 | WP_170852066.1 | conjugal transfer protein TraH | - |
| CQP61_RS02495 () | 76272..79094 | + | 2823 | WP_121832040.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CQP61_RS02500 () | 79109..79594 | + | 486 | WP_000605868.1 | hypothetical protein | - |
| CQP61_RS02505 () | 79643..80374 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| CQP61_RS02510 () | 80577..81314 | + | 738 | WP_123891608.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|