MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110417 bp
Accession: NZ_CP033252 Location: 1..110417 Organism: Escherichia coli strain ECCHD184 Replicon: plasmid pTB212
Accession: NZ_CP033252 Location: 1..110417 Organism: Escherichia coli strain ECCHD184 Replicon: plasmid pTB212
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3W51_RS24105 () | 160..1215 | + | 1056 | WP_122224839.1 | replication protein RepA | - |
| D3W51_RS24115 () | 2003..4342 | - | 2340 | WP_122224841.1 | recombinase RecA | - |
| D3W51_RS24120 () | 4345..4611 | - | 267 | WP_000920226.1 | hypothetical protein | - |
| D3W51_RS24125 () | 4611..5555 | - | 945 | WP_023135728.1 | exonuclease | - |
| D3W51_RS24130 () | 5616..6632 | - | 1017 | WP_064674288.1 | hypothetical protein | - |
| D3W51_RS24135 () | 6752..7183 | - | 432 | WP_053292493.1 | hypothetical protein | - |
| D3W51_RS24140 () | 7293..7853 | + | 561 | WP_049885240.1 | DNA-binding protein | - |
| D3W51_RS24145 () | 7882..11400 | - | 3519 | WP_122224842.1 | DNA polymerase III subunit alpha | - |
| D3W51_RS24155 () | 11581..12816 | - | 1236 | WP_023135733.1 | AAA family ATPase | - |
| D3W51_RS24160 () | 12912..15143 | - | 2232 | WP_122224843.1 | porphyrin biosynthesis protein | - |
| D3W51_RS24165 () | 15256..15468 | - | 213 | WP_024172742.1 | hypothetical protein | - |
| D3W51_RS24170 () | 15725..16114 | + | 390 | WP_003980690.1 | hypothetical protein | - |
| D3W51_RS24175 () | 16109..17212 | - | 1104 | WP_003980691.1 | site-specific integrase | - |
| D3W51_RS24180 () | 17512..17928 | - | 417 | WP_032271783.1 | type II toxin-antitoxin system YafO family toxin | - |
| D3W51_RS24185 () | 17919..18467 | - | 549 | WP_072662626.1 | hypothetical protein | - |
| D3W51_RS24200 () | 19540..19845 | - | 306 | WP_072662625.1 | C-type natriuretic protein | - |
| D3W51_RS24210 () | 19994..20206 | - | 213 | WP_162994690.1 | hypothetical protein | - |
| D3W51_RS24220 () | 20366..21688 | - | 1323 | WP_113421696.1 | DNA ligase | - |
| D3W51_RS24985 () | 21723..22199 | - | 477 | WP_176386592.1 | hypothetical protein | - |
| D3W51_RS24230 () | 22280..23092 | - | 813 | WP_032187677.1 | hypothetical protein | - |
| D3W51_RS24235 () | 23188..23557 | - | 370 | Protein_20 | IS3 family transposase ISEhe3 | Transposase |
| D3W51_RS24240 () | 23756..24737 | + | 982 | Protein_21 | IS3 family transposase ISEc36 | Transposase |
| D3W51_RS24245 () | 24879..25427 | + | 549 | WP_122224844.1 | fimbrial protein YehD | - |
| D3W51_RS24250 () | 25483..26163 | + | 681 | WP_032187672.1 | putative fimbrial chaperone YehC | VF |
| D3W51_RS24255 () | 26181..28667 | + | 2487 | WP_122224845.1 | Outer membrane usher protein YehB | VF |
| D3W51_RS24260 () | 28678..29688 | + | 1011 | WP_087905101.1 | fimbrial protein | - |
| D3W51_RS24265 () | 29873..30094 | + | 222 | WP_001603498.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D3W51_RS24270 () | 30094..30471 | + | 378 | WP_053291281.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| D3W51_RS24280 () | 30605..31720 | - | 1116 | WP_024144822.1 | hypothetical protein | - |
| D3W51_RS24285 () | 31877..33217 | - | 1341 | WP_023135655.1 | AAA family ATPase | - |
| D3W51_RS24290 () | 33278..34003 | - | 726 | WP_087904723.1 | hypothetical protein | - |
| D3W51_RS24295 () | 34286..35053 | + | 768 | WP_033870691.1 | hypothetical protein | - |
| D3W51_RS24300 () | 35106..35459 | - | 354 | WP_160378290.1 | hypothetical protein | - |
| D3W51_RS24305 () | 35465..36133 | - | 669 | WP_000161228.1 | AAA family ATPase | - |
| D3W51_RS24310 () | 36453..36722 | + | 270 | WP_001711191.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| D3W51_RS24315 () | 36730..37251 | + | 522 | WP_033870689.1 | GNAT family N-acetyltransferase | Toxin Detail |
| D3W51_RS24325 () | 37420..37671 | - | 252 | WP_063122787.1 | hypothetical protein | - |
| D3W51_RS24330 () | 37674..38366 | - | 693 | WP_024172707.1 | membrane protein | - |
| D3W51_RS24335 () | 38380..38703 | - | 324 | WP_001711185.1 | hypothetical protein | - |
| D3W51_RS24340 () | 38837..39418 | - | 582 | WP_063122786.1 | tail fiber assembly protein | - |
| D3W51_RS24345 () | 39427..40329 | - | 903 | WP_001711183.1 | macro domain-containing protein | - |
| D3W51_RS24350 () | 40326..42122 | - | 1797 | WP_063122796.1 | phage tail protein | - |
| D3W51_RS24365 () | 43614..48194 | - | 4581 | WP_122224846.1 | DUF1983 domain-containing protein | - |
| D3W51_RS24370 () | 48205..48798 | - | 594 | WP_064674264.1 | tail assembly protein | - |
| D3W51_RS24375 () | 48786..49583 | - | 798 | WP_105906907.1 | C40 family peptidase | - |
| D3W51_RS24380 () | 49573..50274 | - | 702 | WP_032187297.1 | phage minor tail protein L | - |
| D3W51_RS24385 () | 50357..50692 | - | 336 | WP_122224847.1 | phage tail protein | - |
| D3W51_RS24390 () | 50735..55306 | - | 4572 | WP_122224848.1 | tape measure protein | - |
| D3W51_RS24395 () | 55314..55538 | - | 225 | WP_000952684.1 | hypothetical protein | - |
| D3W51_RS24400 () | 55664..55981 | - | 318 | WP_000163862.1 | hypothetical protein | - |
| D3W51_RS24405 () | 56041..56787 | - | 747 | WP_032187301.1 | Ig domain-containing protein | - |
| D3W51_RS24410 () | 56862..57245 | - | 384 | WP_063122781.1 | minor capsid protein | - |
| D3W51_RS24415 () | 57247..57720 | - | 474 | WP_032187304.1 | hypothetical protein | - |
| D3W51_RS24420 () | 57711..58055 | - | 345 | WP_032187305.1 | hypothetical protein | - |
| D3W51_RS24425 () | 58153..58986 | - | 834 | WP_122224849.1 | hypothetical protein | - |
| D3W51_RS24430 () | 58986..59420 | - | 435 | WP_032187307.1 | hypothetical protein | - |
| D3W51_RS24435 () | 59464..59892 | - | 429 | WP_063085588.1 | Ig-like domain-containing protein | - |
| D3W51_RS24440 () | 59967..60842 | - | 876 | WP_032187309.1 | hypothetical protein | - |
| D3W51_RS24445 () | 60869..61762 | - | 894 | WP_063122778.1 | hypothetical protein | - |
| D3W51_RS24450 () | 61785..63359 | - | 1575 | WP_032187311.1 | hypothetical protein | - |
| D3W51_RS24455 () | 63393..64649 | - | 1257 | WP_023135663.1 | phage terminase large subunit | - |
| D3W51_RS24460 () | 64652..65293 | - | 642 | WP_053292519.1 | hypothetical protein | - |
| D3W51_RS24465 () | 65489..65755 | - | 267 | WP_122224850.1 | hypothetical protein | - |
| D3W51_RS24470 () | 65765..66655 | - | 891 | WP_064674278.1 | hypothetical protein | - |
| D3W51_RS24475 () | 66661..66915 | - | 255 | WP_001113021.1 | hypothetical protein | - |
| D3W51_RS24480 () | 66908..67546 | - | 639 | WP_016051719.1 | ATP-binding cassette domain-containing protein | - |
| D3W51_RS24485 () | 67543..68211 | - | 669 | WP_063122774.1 | ParB N-terminal domain-containing protein | - |
| D3W51_RS24490 () | 68211..68909 | - | 699 | WP_089075226.1 | ParB N-terminal domain-containing protein | - |
| D3W51_RS24495 () | 68974..70533 | + | 1560 | WP_097476193.1 | DEAD/DEAH box helicase | - |
| D3W51_RS24500 () | 70536..70814 | + | 279 | WP_001711179.1 | hypothetical protein | - |
| D3W51_RS24505 () | 70874..71296 | + | 423 | WP_032187322.1 | hypothetical protein | - |
| D3W51_RS24510 () | 71301..71828 | + | 528 | WP_024172704.1 | transcriptional regulator | - |
| D3W51_RS24515 () | 72150..72800 | + | 651 | WP_033546627.1 | hypothetical protein | - |
| D3W51_RS24520 () | 72851..73081 | + | 231 | WP_001711144.1 | hypothetical protein | - |
| D3W51_RS24525 () | 73705..74187 | - | 483 | WP_001009192.1 | hypothetical protein | - |
| D3W51_RS24530 () | 74392..74673 | - | 282 | WP_001711139.1 | hypothetical protein | - |
| D3W51_RS24535 () | 75009..75383 | - | 375 | WP_205894328.1 | hypothetical protein | - |
| D3W51_RS24540 () | 75501..75896 | - | 396 | WP_063122768.1 | hypothetical protein | - |
| D3W51_RS24545 () | 76018..76329 | - | 312 | WP_122224852.1 | hypothetical protein | - |
| D3W51_RS24550 () | 76490..76819 | - | 330 | WP_096098955.1 | hypothetical protein | - |
| D3W51_RS24555 () | 76959..77177 | - | 219 | WP_122224853.1 | hypothetical protein | - |
| D3W51_RS24565 () | 78761..78946 | - | 186 | WP_053292512.1 | hypothetical protein | - |
| D3W51_RS24570 () | 78983..79282 | - | 300 | WP_196612164.1 | hypothetical protein | - |
| D3W51_RS24575 () | 79505..80248 | + | 744 | WP_122224854.1 | DUF4145 domain-containing protein | - |
| D3W51_RS24580 () | 80293..80682 | - | 390 | WP_122224855.1 | DNA repair protein | - |
| D3W51_RS24590 () | 81949..82035 | - | 87 | Protein_85 | ead/Ea22-like family protein | - |
| D3W51_RS24600 () | 82432..82806 | - | 375 | Protein_86 | hypothetical protein | - |
| D3W51_RS24605 () | 82869..84554 | - | 1686 | WP_162994691.1 | DUF4942 domain-containing protein | - |
| D3W51_RS24610 () | 84776..86332 | + | 1557 | WP_122224871.1 | type I restriction-modification system subunit M | - |
| D3W51_RS24615 () | 86329..87516 | + | 1188 | WP_122224858.1 | restriction endonuclease subunit S | - |
| D3W51_RS24620 () | 87638..90754 | + | 3117 | WP_122224859.1 | HsdR family type I site-specific deoxyribonuclease | - |
| D3W51_RS24625 () | 90813..91289 | - | 477 | WP_089075296.1 | hypothetical protein | - |
| D3W51_RS24630 () | 91430..92002 | - | 573 | WP_089075297.1 | hypothetical protein | - |
| D3W51_RS24635 () | 92111..92869 | - | 759 | WP_205894329.1 | Rha family transcriptional regulator | - |
| D3W51_RS24640 () | 93033..93221 | - | 189 | WP_032187602.1 | hypothetical protein | - |
| D3W51_RS24645 () | 93231..93731 | - | 501 | WP_032187601.1 | hypothetical protein | - |
| D3W51_RS24650 () | 93874..94482 | - | 609 | WP_089075299.1 | ribonuclease HI | - |
| D3W51_RS24655 () | 95078..95308 | - | 231 | WP_025670509.1 | hypothetical protein | - |
| D3W51_RS24660 () | 95511..96104 | - | 594 | WP_004109976.1 | phage N-6-adenine-methyltransferase | - |
| D3W51_RS24665 () | 96260..97132 | - | 873 | WP_050516620.1 | hypothetical protein | - |
| D3W51_RS24670 () | 97468..98490 | + | 1023 | WP_122224861.1 | HNH endonuclease | - |
| D3W51_RS24675 () | 98493..99056 | - | 564 | WP_122224862.1 | 3'-5' exonuclease | - |
| D3W51_RS24680 () | 99066..99485 | - | 420 | WP_122224863.1 | hypothetical protein | - |
| D3W51_RS24685 () | 99549..100193 | - | 645 | WP_053292503.1 | AAA family ATPase | - |
| D3W51_RS24690 () | 100193..100669 | - | 477 | WP_053292504.1 | dihydrofolate reductase | - |
| D3W51_RS24695 () | 100666..101061 | - | 396 | WP_160956520.1 | hypothetical protein | - |
| D3W51_RS24700 () | 101081..102184 | - | 1104 | WP_033546603.1 | thymidylate synthase | - |
| D3W51_RS24705 () | 102364..103242 | - | 879 | WP_032187593.1 | phosphoribosyl-ATP pyrophosphohydrolase | - |
| D3W51_RS24710 () | 103508..104077 | - | 570 | WP_025670519.1 | hypothetical protein | - |
| D3W51_RS24715 () | 104074..104850 | - | 777 | WP_122224864.1 | hypothetical protein | - |
| D3W51_RS24720 () | 104826..105572 | - | 747 | WP_122224865.1 | hypothetical protein | - |
| D3W51_RS24725 () | 105562..107478 | - | 1917 | WP_032187695.1 | AAA family ATPase | - |
| D3W51_RS24735 () | 107708..108793 | - | 1086 | WP_122224866.1 | metallophosphoesterase | - |
| D3W51_RS24740 () | 109190..109834 | - | 645 | WP_032187692.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|