MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 106229 bp
Accession: NZ_CP033143 Location: 1..106229 Organism: Vibrio parahaemolyticus strain 160807 Replicon: plasmid pVPWZ1
Accession: NZ_CP033143 Location: 1..106229 Organism: Vibrio parahaemolyticus strain 160807 Replicon: plasmid pVPWZ1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0871_RS26180 () | 196..777 | - | 582 | WP_025792420.1 | transglutaminase-like cysteine peptidase | - |
| D0871_RS26185 () | 1004..1486 | + | 483 | Protein_1 | DDE-type integrase/transposase/recombinase | - |
| D0871_RS26190 () | 2124..7010 | - | 4887 | WP_159408507.1 | Ig-like domain-containing protein | - |
| D0871_RS26195 () | 7028..8125 | - | 1098 | WP_122016147.1 | Outer membrane protein A | VF |
| D0871_RS26200 () | 8570..9747 | + | 1178 | WP_122016148.1 | IS3 family transposase ISVch4 | Transposase |
| D0871_RS27000 () | 9744..9887 | + | 144 | WP_156216758.1 | hypothetical protein | - |
| D0871_RS26205 () | 10031..10249 | + | 219 | WP_086597967.1 | hypothetical protein | VF |
| D0871_RS26210 () | 10713..11072 | - | 360 | WP_127914002.1 | hypothetical protein | - |
| D0871_RS26215 () | 11144..11794 | - | 651 | WP_127914003.1 | hypothetical protein | - |
| D0871_RS26220 () | 12051..14822 | - | 2772 | WP_122016150.1 | hypothetical protein | - |
| D0871_RS26225 () | 14826..15746 | - | 921 | WP_025789495.1 | OmpA family protein | - |
| D0871_RS26230 () | 15746..16801 | - | 1056 | WP_025499517.1 | hypothetical protein | - |
| D0871_RS26235 () | 16801..17550 | - | 750 | WP_122016151.1 | hypothetical protein | - |
| D0871_RS26240 () | 17556..20291 | - | 2736 | WP_025789493.1 | TcfC E-set like domain-containing protein | - |
| D0871_RS26795 () | 20288..20491 | - | 204 | WP_127914004.1 | hypothetical protein | - |
| D0871_RS26245 () | 20464..20844 | - | 381 | WP_122016152.1 | hypothetical protein | - |
| D0871_RS26250 () | 20922..21560 | - | 639 | WP_025789491.1 | hypothetical protein | - |
| D0871_RS26255 () | 21928..22566 | + | 639 | Protein_17 | IS5 family transposase ISVpa3 | Transposase |
| D0871_RS26260 () | 22900..23976 | + | 1077 | WP_122016153.1 | replication initiation protein | - |
| D0871_RS26270 () | 25219..25950 | + | 732 | WP_023624652.1 | AHH domain-containing protein | - |
| D0871_RS26275 () | 25950..26525 | + | 576 | WP_017449240.1 | hypothetical protein | - |
| D0871_RS26280 () | 26828..27169 | - | 342 | WP_023624650.1 | endoribonuclease MazF | Toxin Detail |
| D0871_RS26285 () | 27166..27396 | - | 231 | WP_122016154.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| D0871_RS26290 () | 27847..28572 | + | 726 | WP_017449237.1 | site-specific integrase | - |
| D0871_RS26295 () | 28567..28950 | - | 384 | Protein_24 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| D0871_RS26305 () | 29553..29774 | - | 222 | WP_023624649.1 | hypothetical protein | - |
| D0871_RS26310 () | 30084..30458 | + | 375 | WP_127914005.1 | hypothetical protein | - |
| D0871_RS26315 () | 31019..32023 | + | 1005 | WP_159408506.1 | Ig-like domain-containing protein | - |
| D0871_RS26320 () | 31989..32885 | + | 897 | WP_122016156.1 | DUF1566 domain-containing protein | - |
| D0871_RS26325 () | 33178..33612 | - | 435 | WP_023624645.1 | IS630 family transposase ISSod10 | Transposase |
| D0871_RS26330 () | 34399..35331 | + | 933 | WP_023624644.1 | OmpA family protein | - |
| D0871_RS26335 () | 35413..35661 | + | 249 | WP_025789522.1 | hypothetical protein | - |
| D0871_RS26340 () | 35737..36036 | + | 300 | WP_122016157.1 | hypothetical protein | - |
| D0871_RS27005 () | 36426..36602 | + | 177 | WP_023624642.1 | hypothetical protein | - |
| D0871_RS26350 () | 36941..38080 | + | 1140 | WP_122016159.1 | Murein DD-endopeptidase MepM | VF |
| D0871_RS26800 () | 38469..38681 | + | 213 | WP_127914006.1 | hypothetical protein | - |
| D0871_RS26365 () | 38697..39014 | - | 318 | WP_023624638.1 | CcdB family protein | - |
| D0871_RS26370 () | 39014..39259 | - | 246 | WP_017449246.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| D0871_RS26375 () | 39360..39845 | - | 486 | WP_023624637.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| D0871_RS26380 () | 39846..40115 | - | 270 | Protein_39 | IS6 family transposase ISSba18 | Transposase |
| D0871_RS26385 () | 40495..41079 | + | 585 | Protein_40 | replication initiation protein | - |
| D0871_RS26390 () | 41570..41989 | - | 420 | WP_127914007.1 | hypothetical protein | - |
| D0871_RS27010 () | 42147..42320 | - | 174 | WP_017449264.1 | hypothetical protein | - |
| D0871_RS26395 () | 42918..43419 | - | 502 | Protein_43 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| D0871_RS26400 () | 43496..44479 | - | 984 | WP_017449262.1 | outer membrane beta-barrel protein | - |
| D0871_RS26405 () | 44622..45143 | - | 522 | WP_025789149.1 | outer membrane beta-barrel protein | - |
| D0871_RS26410 () | 45612..46589 | - | 978 | Protein_46 | IS91 family transposase ISVa3 | Transposase |
| D0871_RS26415 () | 46608..46912 | - | 305 | Protein_47 | hypothetical protein | - |
| D0871_RS26420 () | 47100..47618 | + | 519 | WP_025789150.1 | hypothetical protein | - |
| D0871_RS26425 () | 47739..48269 | - | 531 | WP_122016161.1 | hypothetical protein | - |
| D0871_RS26430 () | 48272..48478 | - | 207 | WP_023623181.1 | hypothetical protein | - |
| D0871_RS26435 () | 48487..48711 | - | 225 | WP_025789152.1 | hypothetical protein | - |
| D0871_RS26440 () | 48770..49404 | - | 635 | Protein_52 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D0871_RS26445 () | 49745..50998 | - | 1254 | WP_025789153.1 | hypothetical protein | - |
| D0871_RS27015 () | 51358..51501 | - | 144 | WP_153189405.1 | hypothetical protein | - |
| D0871_RS26450 () | 51901..52287 | - | 387 | WP_025792428.1 | hypothetical protein | - |
| D0871_RS26455 () | 52425..53027 | - | 603 | WP_023623175.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| D0871_RS26460 () | 53360..54469 | + | 1110 | WP_122016162.1 | hypothetical protein | - |
| D0871_RS26465 () | 54472..54933 | + | 462 | WP_122016163.1 | hypothetical protein | - |
| D0871_RS26470 () | 55430..55684 | + | 255 | WP_025788840.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D0871_RS26475 () | 55674..55958 | + | 285 | WP_025788842.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D0871_RS26480 () | 55972..56262 | + | 291 | WP_025788843.1 | hypothetical protein | - |
| D0871_RS26485 () | 56275..56526 | + | 252 | WP_025788844.1 | hypothetical protein | - |
| D0871_RS26490 () | 56539..56745 | + | 207 | WP_122016164.1 | hypothetical protein | - |
| D0871_RS26495 () | 57002..57472 | - | 471 | WP_122016165.1 | hypothetical protein | - |
| D0871_RS26500 () | 57764..58021 | + | 258 | WP_017449219.1 | hypothetical protein | - |
| D0871_RS26505 () | 58236..59141 | + | 906 | WP_071653130.1 | DUF1738 domain-containing protein | - |
| D0871_RS26510 () | 59211..59552 | + | 342 | WP_122016166.1 | hypothetical protein | - |
| D0871_RS26515 () | 59713..60126 | + | 414 | WP_017449216.1 | antirestriction protein | - |
| D0871_RS26520 () | 60232..60624 | + | 393 | WP_024700500.1 | hypothetical protein | - |
| D0871_RS26525 () | 60939..61232 | - | 294 | WP_023623304.1 | hypothetical protein | - |
| D0871_RS26530 () | 61262..61471 | - | 210 | WP_017449212.1 | hypothetical protein | - |
| D0871_RS26535 () | 62046..64256 | - | 2211 | WP_122016167.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| D0871_RS26540 () | 64322..65062 | - | 741 | WP_031500108.1 | hypothetical protein | - |
| D0871_RS26545 () | 65059..65598 | - | 540 | WP_122016168.1 | DUF1845 domain-containing protein | - |
| D0871_RS26550 () | 65629..67590 | - | 1962 | WP_122016169.1 | TraM recognition domain-containing protein | - |
| D0871_RS26555 () | 68582..68989 | - | 408 | WP_122016170.1 | H-NS histone family protein | - |
| D0871_RS26560 () | 69570..70610 | - | 1041 | WP_122016171.1 | IS481 family transposase ISVvu4 | Transposase |
| D0871_RS26565 () | 70717..70995 | - | 279 | Protein_78 | hypothetical protein | - |
| D0871_RS26570 () | 70992..71705 | - | 714 | WP_122016172.1 | hypothetical protein | - |
| D0871_RS26575 () | 71698..71988 | - | 291 | WP_122016173.1 | hypothetical protein | - |
| D0871_RS26580 () | 72104..72685 | - | 582 | WP_122016174.1 | hypothetical protein | - |
| D0871_RS26585 () | 72750..73264 | - | 515 | Protein_82 | Type IV secretion system protein virB1 | VF |
| D0871_RS26590 () | 73278..73784 | - | 507 | WP_122016175.1 | conjugative transfer signal peptidase TraF | - |
| D0871_RS26595 () | 73957..74109 | - | 153 | WP_017449302.1 | Hok/Gef family protein | - |
| D0871_RS26600 () | 74430..74699 | - | 270 | WP_017449301.1 | hypothetical protein | - |
| D0871_RS26605 () | 74843..75883 | - | 1041 | WP_122016197.1 | trypsin-like serine protease | - |
| D0871_RS26610 () | 75993..76409 | - | 417 | WP_078231486.1 | hypothetical protein | - |
| D0871_RS26615 () | 76425..77384 | - | 960 | WP_122016176.1 | type II secretion system GspH family protein | - |
| D0871_RS26620 () | 77381..77908 | - | 528 | WP_122016177.1 | hypothetical protein | - |
| D0871_RS26625 () | 77908..78402 | - | 495 | WP_031858790.1 | hypothetical protein | VF |
| D0871_RS26630 () | 78506..79516 | - | 1011 | WP_122016178.1 | hypothetical protein | - |
| D0871_RS26635 () | 79513..81122 | - | 1610 | Protein_92 | Flp pilus assembly complex ATPase component TadA | - |
| D0871_RS26640 () | 81119..81760 | - | 642 | WP_122016179.1 | hypothetical protein | - |
| D0871_RS26645 () | 81757..82881 | - | 1125 | WP_122016180.1 | hypothetical protein | - |
| D0871_RS26650 () | 82881..84368 | - | 1488 | WP_122016198.1 | hypothetical protein | VF |
| D0871_RS26655 () | 84383..85240 | - | 858 | WP_122016181.1 | hypothetical protein | - |
| D0871_RS26660 () | 85253..86509 | - | 1257 | WP_122016182.1 | TrbI/VirB10 family protein | - |
| D0871_RS26665 () | 86502..86924 | - | 423 | WP_017449288.1 | hypothetical protein | - |
| D0871_RS26670 () | 86924..87796 | - | 873 | WP_122016183.1 | P-type conjugative transfer protein TrbG | - |
| D0871_RS26675 () | 87805..88479 | - | 675 | WP_122016184.1 | type IV secretion system protein | - |
| D0871_RS26680 () | 88489..88686 | - | 198 | WP_122016185.1 | hypothetical protein | - |
| D0871_RS26685 () | 88697..90013 | - | 1317 | WP_122016186.1 | P-type conjugative transfer protein TrbL | - |
| D0871_RS26690 () | 90010..90957 | - | 948 | WP_122016187.1 | Type IV secretion system protein VirB11 | VF |
| D0871_RS26695 () | 90968..91726 | - | 759 | WP_122016188.1 | P-type conjugative transfer protein TrbJ | - |
| D0871_RS26700 () | 91723..94134 | - | 2412 | WP_122016189.1 | DUF87 domain-containing protein | - |
| D0871_RS26705 () | 94174..94488 | - | 315 | WP_122016190.1 | VirB3 family type IV secretion system protein | - |
| D0871_RS26710 () | 94499..94828 | - | 330 | WP_122016191.1 | TrbC/VirB2 family protein | - |
| D0871_RS27020 () | 94878..95030 | - | 153 | WP_032072624.1 | hypothetical protein | - |
| D0871_RS26715 () | 95720..96334 | + | 615 | WP_025789731.1 | LexA family transcriptional regulator | - |
| D0871_RS26720 () | 96810..97643 | + | 834 | WP_049873589.1 | hypothetical protein | - |
| D0871_RS27025 () | 98627..98764 | - | 138 | WP_162998354.1 | hypothetical protein | - |
| D0871_RS26730 () | 99032..99556 | - | 525 | Protein_112 | S-type Pyocin family protein | - |
| D0871_RS26735 () | 99847..101046 | + | 1200 | WP_017449270.1 | ParA family protein | - |
| D0871_RS26740 () | 101046..102115 | + | 1070 | Protein_114 | ParB/RepB/Spo0J family partition protein | - |
| D0871_RS26745 () | 102109..102399 | - | 291 | Protein_115 | IS91 family transposase ISVa3 | Transposase |
| D0871_RS26750 () | 102608..102865 | - | 258 | WP_122016193.1 | hypothetical protein | - |
| D0871_RS26755 () | 103306..103860 | - | 555 | WP_122016194.1 | hypothetical protein | - |
| D0871_RS26760 () | 103925..104407 | - | 483 | WP_122016195.1 | metallophosphoesterase | - |
| D0871_RS27030 () | 104364..104528 | + | 165 | WP_164842036.1 | hypothetical protein | - |
| D0871_RS27080 () | 104962..105201 | - | 240 | Protein_120 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|