MGE detailed information
MGE type: Conjugative plasmid MGE length: 83867 bp
Accession: NZ_CP032991 Location: 1..83867 Organism: Escherichia coli strain W2-5 Replicon: plasmid p2_W2-5
Accession: NZ_CP032991 Location: 1..83867 Organism: Escherichia coli strain W2-5 Replicon: plasmid p2_W2-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V55_RS24685 () | 443..824 | - | 382 | Protein_1 | relaxosome protein TraM | - |
| D9V55_RS24690 () | 1238..1748 | + | 511 | Protein_2 | transglycosylase SLT domain-containing protein | - |
| D9V55_RS24695 () | 2045..2865 | - | 821 | Protein_3 | DUF932 domain-containing protein | - |
| D9V55_RS24700 () | 2976..3272 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| D9V55_RS25705 () | 3572..3948 | + | 377 | Protein_5 | hypothetical protein | - |
| D9V55_RS24720 () | 4186..4344 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 4388..4612 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4388..4612 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4388..4612 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4388..4612 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| D9V55_RS25580 () | 4424..4603 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| D9V55_RS24725 () | 4624..5343 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| D9V55_RS24730 () | 5340..5774 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| D9V55_RS24735 () | 5843..7866 | - | 2024 | Protein_10 | ParB/RepB/Spo0J family partition protein | - |
| D9V55_RS24740 () | 7927..8160 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| D9V55_RS24745 () | 8218..8745 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| D9V55_RS24770 () | 9588..10151 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| D9V55_RS24775 () | 10197..11558 | - | 1362 | WP_121636736.1 | DUF3560 domain-containing protein | - |
| D9V55_RS24780 () | 11610..11840 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| D9V55_RS24795 () | 12878..13069 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| D9V55_RS24800 () | 13066..13488 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| D9V55_RS24805 () | 13535..13837 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| D9V55_RS25710 () | 14378..15154 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| D9V55_RS24820 () | 15205..15639 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| D9V55_RS24825 () | 15653..15874 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| D9V55_RS24830 () | 15875..16558 | - | 684 | WP_000085883.1 | DNA methylase | - |
| D9V55_RS24835 () | 16635..16928 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| D9V55_RS24840 () | 17075..18037 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| D9V55_RS24845 () | 18040..18390 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| D9V55_RS24850 () | 18513..18794 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| D9V55_RS24855 () | 18922..19156 | - | 235 | Protein_27 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D9V55_RS25715 () | 20605..20670 | - | 66 | Protein_28 | IS1 family transposase | - |
| D9V55_RS24875 () | 20736..21440 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| D9V55_RS24880 () | 21862..22737 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| D9V55_RS24885 () | 22784..23260 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| D9V55_RS24890 () | 23449..24153 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D9V55_RS24900 () | 24559..25263 | - | 705 | WP_032193599.1 | replication initiation protein | - |
| D9V55_RS24905 () | 25293..25997 | - | 705 | WP_102204227.1 | IS6 family transposase IS15DI | Transposase |
| D9V55_RS24910 () | 26196..26519 | - | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| D9V55_RS24915 () | 26624..27661 | + | 1038 | WP_044502555.1 | permease | - |
| D9V55_RS24920 () | 27954..28571 | - | 618 | WP_000521603.1 | hypothetical protein | - |
| D9V55_RS24925 () | 28762..30318 | - | 1557 | WP_024126035.1 | AAA family ATPase | - |
| D9V55_RS24930 () | 30581..31171 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| D9V55_RS24935 () | 31171..31428 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| D9V55_RS24940 () | 31782..33920 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| D9V55_RS24945 () | 34082..34498 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| D9V55_RS24950 () | 34495..34725 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| D9V55_RS24960 () | 35033..36598 | + | 1566 | WP_000741348.1 | ATP-binding protein | - |
| D9V55_RS24965 () | 36655..37524 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| D9V55_RS24970 () | 37526..38614 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| D9V55_RS24975 () | 38912..39844 | - | 933 | WP_000991830.1 | hypothetical protein | - |
| D9V55_RS24980 () | 39848..40843 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| D9V55_RS24990 () | 41523..41873 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| D9V55_RS24995 () | 41924..42667 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| D9V55_RS25000 () | 42664..43440 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| D9V55_RS25005 () | 43498..43755 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| D9V55_RS25585 () | 43884..43988 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| D9V55_RS25010 () | 44218..44406 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| D9V55_RS25015 () | 44416..45615 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| D9V55_RS25590 () | 45779..45937 | - | 159 | WP_047667301.1 | membrane protein | - |
| D9V55_RS25030 () | 46877..47734 | - | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| D9V55_RS25035 () | 47727..47801 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| D9V55_RS25045 () | 48046..48294 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| D9V55_RS25050 () | 48578..48727 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 48772..48831 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48772..48831 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48772..48831 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48772..48831 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| D9V55_RS25060 () | 49032..49262 | - | 231 | WP_001736714.1 | hypothetical protein | - |
| D9V55_RS25065 () | 49426..50025 | - | 600 | WP_032083981.1 | hypothetical protein | - |
| D9V55_RS25070 () | 50411..50611 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| D9V55_RS25075 () | 50743..51303 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| D9V55_RS25080 () | 51358..52104 | - | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| D9V55_RS25085 () | 52124..57394 | - | 5271 | WP_061093447.1 | Multifunctional conjugation protein TraI | Relaxase |
| D9V55_RS25090 () | 57394..59655 | - | 2262 | WP_086118634.1 | type IV conjugative transfer system coupling protein TraD | - |
| D9V55_RS25095 () | 59706..60443 | - | 738 | WP_015059020.1 | hypothetical protein | - |
| D9V55_RS25100 () | 60646..61377 | - | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| D9V55_RS25105 () | 61402..61923 | - | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| D9V55_RS25110 () | 61956..64772 | - | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| D9V55_RS25115 () | 64769..66142 | - | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| D9V55_RS25120 () | 66129..66521 | - | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| D9V55_RS25125 () | 66475..66849 | - | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| D9V55_RS25130 () | 66779..67324 | - | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| D9V55_RS25135 () | 67311..67592 | - | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| D9V55_RS25140 () | 67708..68451 | - | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| D9V55_RS25145 () | 68444..68701 | - | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| D9V55_RS25150 () | 68728..70578 | - | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| D9V55_RS25155 () | 70575..70997 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| D9V55_RS25160 () | 71023..71394 | - | 372 | WP_000056336.1 | hypothetical protein | - |
| D9V55_RS25165 () | 71391..72029 | - | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| D9V55_RS25170 () | 72056..72577 | - | 522 | WP_015059014.1 | hypothetical protein | - |
| D9V55_RS25175 () | 72640..72948 | - | 309 | WP_000412447.1 | hypothetical protein | - |
| D9V55_RS25180 () | 72975..73967 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| D9V55_RS25185 () | 73964..74596 | - | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| D9V55_RS25190 () | 74593..74979 | - | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| D9V55_RS25195 () | 74976..77603 | - | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| D9V55_RS25200 () | 77763..77984 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| D9V55_RS25205 () | 78119..78634 | - | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| D9V55_RS25210 () | 78631..78882 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| D9V55_RS25215 () | 78894..79124 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| D9V55_RS25220 () | 79078..79668 | - | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| D9V55_RS25225 () | 79658..81085 | - | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| D9V55_RS25230 () | 81085..81789 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| D9V55_RS25235 () | 81800..82366 | - | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| D9V55_RS25240 () | 82388..82699 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| D9V55_RS25245 () | 82714..83079 | - | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| D9V55_RS25250 () | 83113..83340 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|