MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67351 bp
Accession: NZ_CP032891 Location: 1..67351 Organism: Escherichia coli strain SCEC020022 Replicon: plasmid pVir_020022
Accession: NZ_CP032891 Location: 1..67351 Organism: Escherichia coli strain SCEC020022 Replicon: plasmid pVir_020022
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7V31_RS02485 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| C7V31_RS02490 () | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| C7V31_RS02495 () | 2124..2312 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| C7V31_RS02500 () | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| C7V31_RS02505 () | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| C7V31_RS02515 () | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| C7V31_RS02520 () | 6256..6645 | + | 390 | WP_001332050.1 | outer membrane protease | - |
| C7V31_RS02530 () | 7425..7583 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| C7V31_RS02535 () | 7767..8506 | + | 740 | Protein_8 | IS3 family transposase IS629 | Transposase |
| C7V31_RS02545 () | 9179..10687 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| C7V31_RS02550 () | 10777..11250 | + | 474 | Protein_10 | IS3 family transposase IS629 | Transposase |
| C7V31_RS02555 () | 11398..11666 | - | 269 | Protein_11 | integrase core domain-containing protein | - |
| C7V31_RS02560 () | 11723..12420 | + | 698 | Protein_12 | IS1 family transposase IS1R | Transposase |
| C7V31_RS02565 () | 12498..13887 | - | 1390 | Protein_13 | ISNCY family transposase ISKpn21 | Transposase |
| C7V31_RS02570 () | 13975..14679 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C7V31_RS02575 () | 14733..15164 | - | 432 | Protein_15 | incFII family plasmid replication initiator RepA | - |
| C7V31_RS02580 () | 15157..15639 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| C7V31_RS02585 () | 15632..15706 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| C7V31_RS02595 () | 15938..16195 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| C7V31_RS02600 () | 16479..16685 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 16672..16733 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 16672..16733 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 16672..16733 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 16672..16733 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| C7V31_RS02610 () | 17095..18636 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| C7V31_RS02615 () | 18651..19397 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| C7V31_RS27565 () | 19577..19651 | - | 75 | Protein_22 | endonuclease | - |
| C7V31_RS02620 () | 19897..20109 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| C7V31_RS02625 () | 20245..20805 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| C7V31_RS02630 () | 20908..21768 | - | 861 | WP_025693494.1 | putative protein YcjY | VF |
| C7V31_RS02635 () | 21827..22573 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| C7V31_RS02640 () | 22593..27863 | - | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| C7V31_RS02645 () | 27945..28172 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C7V31_RS02650 () | 28172..28570 | + | 399 | WP_000911313.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C7V31_RS02655 () | 28579..30732 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| C7V31_RS02665 () | 30985..31716 | - | 732 | WP_023565183.1 | complement resistance protein TraT | - |
| C7V31_RS02670 () | 31748..32245 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| C7V31_RS02675 () | 32261..35083 | - | 2823 | WP_001007018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C7V31_RS02680 () | 35080..36453 | - | 1374 | WP_001517790.1 | conjugal transfer protein TraH | - |
| C7V31_RS02685 () | 36453..36866 | - | 414 | WP_001324104.1 | F-type conjugal transfer protein TrbF | - |
| C7V31_RS02690 () | 36820..37161 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| C7V31_RS02695 () | 37091..37636 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C7V31_RS02700 () | 37623..37907 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C7V31_RS02705 () | 37988..38302 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| C7V31_RS02710 () | 38304..38651 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| C7V31_RS02715 () | 38667..39410 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C7V31_RS27570 () | 39403..39546 | - | 144 | Protein_42 | conjugal transfer protein TrbE | - |
| C7V31_RS02730 () | 39593..40297 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C7V31_RS02735 () | 40361..40594 | - | 234 | Protein_44 | DUF932 domain-containing protein | - |
| C7V31_RS02740 () | 40712..40999 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| C7V31_RS02755 () | 41920..42078 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 42122..42346 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 42122..42346 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 42122..42346 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 42122..42346 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| C7V31_RS27220 () | 42158..42346 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| C7V31_RS02760 () | 42358..43077 | - | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| C7V31_RS02765 () | 43074..43508 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| C7V31_RS02770 () | 43563..43760 | - | 198 | Protein_50 | hypothetical protein | - |
| C7V31_RS02775 () | 43788..44021 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| C7V31_RS02780 () | 44089..44628 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| C7V31_RS27575 () | 44654..44860 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| C7V31_RS02805 () | 45999..46970 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C7V31_RS02810 () | 46970..48136 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| C7V31_RS02815 () | 48436..49133 | - | 698 | Protein_56 | IS1 family transposase IS1R | Transposase |
| C7V31_RS02825 () | 49618..51819 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| C7V31_RS02830 () | 51901..53178 | - | 1278 | WP_064055650.1 | L-lysine N6-monooxygenase | VF |
| C7V31_RS02835 () | 53175..54917 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| C7V31_RS02840 () | 54917..55864 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| C7V31_RS02845 () | 55865..57589 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| C7V31_RS02850 () | 57725..58918 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| C7V31_RS02855 () | 59298..59678 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| C7V31_RS02865 () | 60019..60432 | - | 414 | Protein_64 | phosphopyruvate hydratase | - |
| C7V31_RS02870 () | 60430..60687 | + | 258 | Protein_65 | Tn3 family transposase | - |
| C7V31_RS02875 () | 60921..61778 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| C7V31_RS02880 () | 61775..62632 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| C7V31_RS02885 () | 62629..63456 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| C7V31_RS02890 () | 63456..64370 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| C7V31_RS02900 () | 64726..65423 | + | 698 | Protein_70 | IS1 family transposase IS1R | Transposase |
| C7V31_RS02905 () | 65603..66116 | - | 514 | Protein_71 | DUF4113 domain-containing protein | - |
| C7V31_RS27580 () | 66177..66281 | - | 105 | Protein_72 | AAA family ATPase | - |
| C7V31_RS02915 () | 66283..66606 | - | 324 | Protein_73 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|