NZ_CP0328771..150853

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 150853 bp
Accession: NZ_CP032877        Location: 1..150853         Organism: Escherichia coli strain WCHEC000837       Replicon: plasmid pCTXM15_000837


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
D9N32_RS00660 () 606..1145 + 540 WP_000290840.1 single-stranded DNA-binding protein -
D9N32_RS00665 () 1213..1446 + 234 WP_000005990.1 DUF905 family protein -
D9N32_RS00670 () 1474..1671 + 198 Protein_2 hypothetical protein -
D9N32_RS00675 () 1726..2160 + 435 WP_000845937.1 conjugation system SOS inhibitor PsiB -
D9N32_RS00680 () 2157..2876 + 720 WP_001276238.1 plasmid SOS inhibition protein A -
D9N32_RS27405 () 2888..3076 - 189 WP_001299721.1 hypothetical protein -
- () 2888..3085 + 198 NuclAT_0 - -
- () 2888..3085 + 198 NuclAT_0 - -
- () 2888..3085 + 198 NuclAT_0 - -
- () 2888..3085 + 198 NuclAT_0 - -
D9N32_RS00685 () 3133..4502 + 1370 WP_085947770.1 IS3 family transposase IS150 Transposase
- () 4527..4558 + 32 NuclAT_1 - Antitoxin Detail
- () 4527..4558 + 32 NuclAT_1 - Antitoxin Detail
- () 4527..4558 + 32 NuclAT_1 - Antitoxin Detail
- () 4527..4558 + 32 NuclAT_1 - Antitoxin Detail
D9N32_RS00690 () 4602..4760 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
D9N32_RS00695 () 5155..6822 - 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -
D9N32_RS00705 () 8024..8311 + 288 WP_000107535.1 hypothetical protein -
D9N32_RS00710 () 8429..9250 + 822 WP_001234426.1 DUF945 domain-containing protein -
D9N32_RS00715 () 9547..10149 - 603 WP_013362798.1 hypothetical protein VF
D9N32_RS00720 () 10470..10853 + 384 WP_001151524.1 relaxosome protein TraM -
D9N32_RS00725 () 11040..11729 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
D9N32_RS00730 () 11828..12223 + 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
D9N32_RS00735 () 12256..12621 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
D9N32_RS00740 () 12636..12947 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
D9N32_RS00745 () 12969..13535 + 567 WP_021514868.1 type IV conjugative transfer system protein TraE -
D9N32_RS00750 () 13546..14250 + 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
D9N32_RS00755 () 14250..15677 + 1428 WP_000146685.1 conjugal transfer protein TraB -
D9N32_RS00760 () 15667..16257 + 591 WP_000002787.1 conjugal transfer protein TraP -
D9N32_RS00765 () 16211..16441 + 231 WP_001352845.1 conjugal transfer protein TrbD -
D9N32_RS00770 () 16453..16704 + 252 WP_001038342.1 conjugal transfer protein TrbG -
D9N32_RS00775 () 16701..17216 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
D9N32_RS00780 () 17351..17572 + 222 WP_001278689.1 conjugal transfer protein TraR -
D9N32_RS00785 () 17732..20359 + 2628 WP_001064245.1 type IV secretion system protein TraC -
D9N32_RS00790 () 20356..20742 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
D9N32_RS00795 () 20739..21371 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
D9N32_RS00800 () 21368..22360 + 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
D9N32_RS00805 () 22369..23007 + 639 WP_021518374.1 type-F conjugative transfer system pilin assembly protein TrbC -
D9N32_RS00810 () 23004..24812 + 1809 WP_000821840.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
D9N32_RS00815 () 24839..25096 + 258 WP_000864312.1 conjugal transfer protein TrbE -
D9N32_RS00820 () 25089..25832 + 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
D9N32_RS00825 () 25846..26187 + 342 WP_000556794.1 conjugal transfer protein TrbA -
D9N32_RS00830 () 26168..26503 - 336 WP_000415571.1 hypothetical protein -
D9N32_RS00835 () 26584..26868 + 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
D9N32_RS00840 () 26855..27409 + 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
D9N32_RS00845 () 27339..27713 + 375 WP_071788165.1 P-type conjugative transfer protein TrbJ -
D9N32_RS00850 () 27667..28059 + 393 WP_000164675.1 F-type conjugal transfer protein TrbF -
D9N32_RS00855 () 28046..29419 + 1374 WP_021518370.1 conjugal transfer protein TraH -
D9N32_RS00860 () 29416..32241 + 2826 WP_087503535.1 conjugal transfer mating pair stabilization protein TraG -
D9N32_RS00865 () 32238..32747 + 510 WP_000628100.1 conjugal transfer entry exclusion protein TraS -
D9N32_RS00870 () 32761..33492 + 732 WP_000850424.1 complement resistance protein TraT -
D9N32_RS00880 () 33744..35942 + 2199 WP_046464200.1 type IV conjugative transfer system coupling protein TraD -
D9N32_RS00885 () 35942..41062 + 5121 WP_013362805.1 Multifunctional conjugation protein TraI Relaxase
D9N32_RS00890 () 41082..41828 + 747 WP_023149624.1 conjugal transfer pilus acetylase TraX -
D9N32_RS00895 () 41883..42443 + 561 WP_000139363.1 fertility inhibition protein FinO -
D9N32_RS00900 () 42577..42789 + 213 WP_005012601.1 hypothetical protein -
D9N32_RS27740 () 43090..43179 - 90 Protein_48 IS1 family transposase -
D9N32_RS00915 () 43234..43911 + 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
D9N32_RS00920 () 43911..44258 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
D9N32_RS00925 () 44278..45849 + 1572 WP_023149734.1 IS66 family transposase ISCro1 Transposase
D9N32_RS00930 () 45887..46503 - 617 Protein_52 IS1 family transposase -
D9N32_RS00935 () 46604..46786 + 183 WP_000968309.1 hypothetical protein -
- () 46925..46986 - 62 NuclAT_2 - Antitoxin Detail
- () 46925..46986 - 62 NuclAT_2 - Antitoxin Detail
- () 46925..46986 - 62 NuclAT_2 - Antitoxin Detail
- () 46925..46986 - 62 NuclAT_2 - Antitoxin Detail
D9N32_RS00945 () 46973..47179 + 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
D9N32_RS00950 () 47463..47720 + 258 WP_000083833.1 replication regulatory protein RepA -
D9N32_RS00960 () 47956..48030 + 75 WP_032336874.1 RepA leader peptide Tap -
D9N32_RS00965 () 48023..48469 + 447 Protein_57 incFII family plasmid replication initiator RepA -
D9N32_RS00970 () 48415..48897 - 483 Protein_58 VENN motif pre-toxin domain-containing protein -
D9N32_RS00975 () 49790..51010 + 1221 WP_000410951.1 arginine deiminase -
D9N32_RS00980 () 51021..51932 + 912 WP_000440183.1 carbamate kinase -
D9N32_RS00985 () 52017..53021 + 1005 WP_000154545.1 Ornithine carbamoyltransferase VF
D9N32_RS00990 () 53069..54472 + 1404 WP_000514417.1 YfcC family protein -
D9N32_RS00995 () 54553..55032 + 480 WP_001496175.1 ArgR family transcriptional regulator -
D9N32_RS01000 () 55096..55437 - 342 Protein_64 transposase -
D9N32_RS01005 () 55389..55610 - 222 WP_000080227.1 IS66 family transposase ISEc43 Transposase
D9N32_RS01010 () 55641..55991 - 351 WP_000624725.1 IS66 family transposase ISEc47 Transposase
D9N32_RS01015 () 55988..56350 - 363 WP_059330006.1 IS66 family transposase ISEc23 Transposase
D9N32_RS01020 () 56459..57156 - 698 Protein_68 IS1 family transposase IS1A Transposase
D9N32_RS01025 () 57189..57767 + 579 WP_032152936.1 DUF2726 domain-containing protein -
D9N32_RS01030 () 58180..58533 - 354 WP_000005489.1 hypothetical protein -
D9N32_RS01035 () 59005..60027 - 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
D9N32_RS01045 () 60432..60689 + 258 WP_000083821.1 replication regulatory protein RepA -
D9N32_RS01055 () 60924..60998 + 75 WP_001365705.1 RepA leader peptide Tap -
D9N32_RS01060 () 60991..61848 + 858 WP_032152935.1 incFII family plasmid replication initiator RepA -
D9N32_RS01070 () 62787..63440 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
D9N32_RS27410 () 63533..63790 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
D9N32_RS01075 () 63723..64124 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
D9N32_RS01085 () 64261..67158 - 2898 WP_001553819.1 Tn3 family transposase TnpA_Tn5403 Transposase
D9N32_RS01090 () 67253..67858 + 606 WP_000509966.1 Tn3 family transposase TnpR_Tn5403 Transposase
D9N32_RS01095 () 67882..68394 - 513 Protein_80 Tn3 family transposase TnpA_TnAs1 Transposase
D9N32_RS01100 () 68460..69164 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
D9N32_RS01105 () 69308..69862 + 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
D9N32_RS01110 () 69993..70823 + 831 WP_001334766.1 Beta-lactamase OXA-1 ARG
D9N32_RS01115 () 70961..71401 + 441 Protein_84 CatB-related O-acetyltransferase -
D9N32_RS01120 () 71455..72159 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
D9N32_RS01125 () 72266..73126 + 861 WP_000557452.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
D9N32_RS01130 () 73139..73681 + 543 WP_002063889.1 AAA family ATPase -
D9N32_RS01135 () 73773..74821 + 1049 Protein_88 IS3 family transposase ISKpn11 Transposase
D9N32_RS01140 () 74875..75579 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
D9N32_RS01145 () 75644..77887 - 2244 Protein_90 Tn3 family transposase TnpA_Tn3 Transposase
D9N32_RS01150 () 77901..78233 + 333 WP_001393253.1 WbuC family cupin fold metalloprotein -
D9N32_RS01155 () 78280..79155 - 876 WP_000239590.1 Beta-lactamase CTX-M-1 ARG
D9N32_RS01160 () 79411..80379 - 969 Protein_93 IS1380 family transposase ISEcp1 Transposase
D9N32_RS01165 () 80433..81137 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
D9N32_RS27415 () 81174..81464 - 291 WP_032152941.1 DUF3330 domain-containing protein -
D9N32_RS01175 () 81667..82680 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
D9N32_RS01180 () 82838..83311 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
D9N32_RS01185 () 83442..84230 + 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
D9N32_RS01190 () 84436..84783 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
D9N32_RS01195 () 84777..85616 + 840 WP_000259031.1 Dihydropteroate synthase ARG
D9N32_RS01205 () 85813..86016 + 204 WP_064765192.1 hypothetical protein -
D9N32_RS01215 () 86357..87061 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
D9N32_RS01225 () 87183..88088 + 906 WP_000219391.1 hypothetical protein ARG
D9N32_RS01230 () 88085..89323 + 1239 WP_000004159.1 MFS transporter -
D9N32_RS01235 () 89323..89907 + 585 WP_001137892.1 TetR family transcriptional regulator -
D9N32_RS01250 () 90400..90636 - 237 Protein_106 IS6 family transposase -
D9N32_RS01260 () 90688..91392 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
D9N32_RS01265 () 91457..91903 + 447 Protein_108 DsbA family protein -
D9N32_RS01270 () 91969..92742 + 774 WP_032152933.1 SDR family oxidoreductase -
D9N32_RS01275 () 92928..94151 - 1224 WP_000872613.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
D9N32_RS01280 () 94282..95154 - 873 WP_000090196.1 DMT family transporter -
D9N32_RS01285 () 95396..96148 + 753 WP_000734115.1 alpha/beta hydrolase -
D9N32_RS01290 () 96175..96488 + 314 Protein_113 Tn3 family transposase -
D9N32_RS01295 () 96588..97592 + 1005 WP_021546935.1 IS110 family transposase IS4321R Transposase
D9N32_RS01300 () 97870..97974 + 105 Protein_115 IS5/IS1182 family transposase -
D9N32_RS01305 () 98124..98756 - 633 Protein_116 histidine-type phosphatase -
D9N32_RS01310 () 98878..99363 - 486 WP_000874189.1 hypothetical protein -
D9N32_RS01315 () 99388..99873 - 486 WP_001267176.1 TlpA family protein disulfide reductase -
D9N32_RS01320 () 99860..100555 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
D9N32_RS01325 () 100560..101690 - 1131 WP_000729219.1 ABC transporter permease -
D9N32_RS01330 () 101680..102963 - 1284 WP_000964653.1 ABC transporter permease -
D9N32_RS01335 () 102966..104345 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
D9N32_RS01340 () 104449..104976 - 528 WP_000178050.1 iron transporter -
D9N32_RS01345 () 105017..106903 - 1887 WP_000118029.1 FTR1 family iron permease -
D9N32_RS01355 () 107250..108065 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
D9N32_RS01360 () 108248..108754 - 507 WP_000949452.1 protein disulfide oxidoreductase -
D9N32_RS01365 () 108744..108902 - 159 WP_000449408.1 DsbA family protein -
D9N32_RS27745 () 109052..109165 - 114 Protein_128 IS6 family transposase -
D9N32_RS01375 () 109365..110062 + 698 Protein_129 IS1 family transposase IS1X2 Transposase
D9N32_RS01380 () 110097..111302 - 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
D9N32_RS01385 () 111384..112007 + 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
D9N32_RS01390 () 111985..112671 - 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
D9N32_RS01395 () 112679..113065 - 387 WP_000460651.1 hypothetical protein -
D9N32_RS01400 () 113058..113321 - 264 WP_049802299.1 antibiotic biosynthesis monooxygenase -
D9N32_RS01405 () 113318..114015 - 698 Protein_135 IS1 family transposase IS1R Transposase
D9N32_RS01410 () 114204..114908 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
D9N32_RS01415 () 114959..115222 - 264 Protein_137 DsbA family protein -
D9N32_RS01420 () 115288..116394 - 1107 WP_000039982.1 alkene reductase -
D9N32_RS01425 () 116608..116937 + 330 WP_002431133.1 thioredoxin family protein -
D9N32_RS01430 () 116967..117305 - 339 WP_000888080.1 carboxymuconolactone decarboxylase family protein -
D9N32_RS01435 () 117310..117891 - 582 WP_000210409.1 HTH-type transcriptional repressor NemR VF
D9N32_RS01440 () 118033..118590 - 558 WP_000108589.1 OsmC family protein -
D9N32_RS01445 () 118775..119164 - 390 Protein_143 Tn3 family transposase TnpR_ISSba14 Transposase
D9N32_RS01455 () 119217..119921 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
D9N32_RS01460 () 119946..120320 + 375 WP_024193849.1 IS66 family insertion sequence element accessory protein TnpB -
D9N32_RS01465 () 120369..121314 + 946 Protein_146 IS66 family transposase ISEc8 Transposase
D9N32_RS01475 () 121400..122422 + 1023 WP_000255956.1 IS21 family transposase IS100kyp Transposase
D9N32_RS01480 () 122419..123201 + 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
D9N32_RS01485 () 123269..123877 + 609 Protein_149 IS66 family transposase ISEc22 Transposase
D9N32_RS01490 () 123940..124731 - 792 WP_000977394.1 DUF4198 domain-containing protein -
D9N32_RS01495 () 124738..126708 - 1971 WP_001298664.1 Hemin receptor VF
D9N32_RS01500 () 126990..127426 + 437 Protein_152 IS3 family transposase IS2 Transposase
D9N32_RS01505 () 127951..128223 + 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
D9N32_RS01510 () 128669..128844 + 176 Protein_154 IS3 family transposase -
D9N32_RS01515 () 129070..130239 - 1170 WP_001072358.1 hypothetical protein -
D9N32_RS01520 () 130606..130794 + 189 WP_001309252.1 hypothetical protein -
D9N32_RS01525 () 130915..131655 + 741 WP_001066953.1 tyrosine-type recombinase/integrase -
D9N32_RS01530 () 131940..132917 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
D9N32_RS01545 () 134092..134733 - 642 WP_000990667.1 hypothetical protein -
D9N32_RS01560 () 137053..137271 + 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
D9N32_RS01565 () 137273..137578 + 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
D9N32_RS01570 () 137579..138385 + 807 WP_000016970.1 site-specific integrase -
D9N32_RS01575 () 139107..139862 + 756 WP_000852146.1 replication initiation protein RepE -
D9N32_RS01580 () 140450..141616 + 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
D9N32_RS01585 () 141616..142587 + 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
D9N32_RS01595 () 143325..144227 + 903 WP_064766247.1 DUF1281 domain-containing protein -
D9N32_RS01600 () 144231..144535 + 305 Protein_167 hypothetical protein -
D9N32_RS01605 () 144612..145295 + 684 WP_032181561.1 DNA methylase -
D9N32_RS01610 () 145296..145517 + 222 WP_001104873.1 hypothetical protein -
D9N32_RS01615 () 145531..145965 + 435 WP_001546462.1 DUF1380 family protein -
D9N32_RS01620 () 146010..146780 + 771 WP_001006251.1 hypothetical protein -
D9N32_RS01630 () 147317..147619 + 303 WP_001666994.1 antirestriction protein -
D9N32_RS01635 () 147666..148088 + 423 WP_000271685.1 DUF1380 family protein -
D9N32_RS01640 () 148085..148276 + 192 WP_001027495.1 hypothetical protein -
D9N32_RS01645 () 148589..150256 - 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance