MGE detailed information
MGE type: Conjugative plasmid MGE length: 63089 bp
Accession: NZ_CP032799 Location: 1..63089 Organism: Escherichia coli strain ERL06-2497 Replicon: plasmid pERL06-2497-2
Accession: NZ_CP032799 Location: 1..63089 Organism: Escherichia coli strain ERL06-2497 Replicon: plasmid pERL06-2497-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z72_RS28610 () | 1..261 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| D8Z72_RS28620 () | 486..560 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| D8Z72_RS28625 () | 553..1410 | + | 858 | WP_001554370.1 | incFII family plasmid replication initiator RepA | - |
| D8Z72_RS29280 () | 2110..2268 | + | 159 | WP_192795837.1 | hypothetical protein | - |
| D8Z72_RS28635 () | 2323..2592 | + | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| D8Z72_RS28640 () | 2589..2870 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D8Z72_RS28645 () | 2955..3302 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| D8Z72_RS28650 () | 3320..3910 | - | 591 | WP_042004720.1 | hypothetical protein | - |
| D8Z72_RS28655 () | 3907..4167 | - | 261 | WP_019842588.1 | hypothetical protein | - |
| D8Z72_RS28660 () | 4736..5149 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| D8Z72_RS28665 () | 5151..5933 | + | 783 | WP_001164199.1 | site-specific integrase | - |
| D8Z72_RS28670 () | 6106..6459 | + | 354 | WP_001401712.1 | colicin M immunity protein | - |
| D8Z72_RS28675 () | 6509..7324 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| D8Z72_RS28685 () | 7567..8094 | + | 528 | WP_001480711.1 | colicin B immunity protein | - |
| D8Z72_RS28690 () | 8112..9647 | - | 1536 | WP_151553447.1 | pore-forming bacteriocin colicin B | - |
| D8Z72_RS28700 () | 10088..10600 | + | 513 | WP_151553468.1 | hypothetical protein | - |
| D8Z72_RS28705 () | 10751..11101 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| D8Z72_RS28710 () | 11104..12066 | - | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| D8Z72_RS28715 () | 12212..12504 | + | 293 | Protein_18 | hypothetical protein | - |
| D8Z72_RS28725 () | 12581..13264 | + | 684 | WP_000085890.1 | DNA methylase | - |
| D8Z72_RS28730 () | 13265..13486 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| D8Z72_RS28735 () | 13500..13934 | + | 435 | WP_000274455.1 | DUF1380 family protein | - |
| D8Z72_RS28740 () | 13985..14761 | + | 777 | WP_001483071.1 | hypothetical protein | - |
| D8Z72_RS29285 () | 15300..15602 | + | 303 | WP_072128676.1 | antirestriction protein | - |
| D8Z72_RS28755 () | 15649..16071 | + | 423 | WP_097701254.1 | DUF1380 family protein | - |
| D8Z72_RS28760 () | 16068..16259 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| D8Z72_RS28775 () | 17300..17530 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| D8Z72_RS28780 () | 17582..18943 | + | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| D8Z72_RS28785 () | 18990..19553 | + | 564 | WP_063501602.1 | class I SAM-dependent methyltransferase | - |
| D8Z72_RS28790 () | 19705..19938 | + | 234 | WP_071588969.1 | hypothetical protein | - |
| D8Z72_RS28810 () | 20411..20950 | + | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| D8Z72_RS28815 () | 21012..21245 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| D8Z72_RS28820 () | 21310..23268 | + | 1959 | WP_001530506.1 | ParB/RepB/Spo0J family partition protein | - |
| D8Z72_RS28825 () | 23323..23757 | + | 435 | WP_000845923.1 | conjugation system SOS inhibitor PsiB | - |
| D8Z72_RS28830 () | 23754..24473 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| D8Z72_RS29290 () | 24485..24673 | - | 189 | WP_001336239.1 | hypothetical protein | - |
| - () | 24485..24709 | + | 225 | NuclAT_0 | - | - |
| - () | 24485..24709 | + | 225 | NuclAT_0 | - | - |
| - () | 24485..24709 | + | 225 | NuclAT_0 | - | - |
| - () | 24485..24709 | + | 225 | NuclAT_0 | - | - |
| D8Z72_RS28835 () | 24753..24911 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| D8Z72_RS28850 () | 25832..26119 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| D8Z72_RS28855 () | 26238..27059 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| D8Z72_RS28860 () | 27356..27946 | - | 591 | WP_165850686.1 | transglycosylase SLT domain-containing protein | - |
| D8Z72_RS28865 () | 28279..28662 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| D8Z72_RS28870 () | 28849..29538 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| D8Z72_RS28875 () | 29637..30032 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| D8Z72_RS28880 () | 30065..30424 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| D8Z72_RS28885 () | 30439..30750 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| D8Z72_RS28890 () | 30772..31338 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| D8Z72_RS28895 () | 31349..32053 | + | 705 | WP_148725734.1 | type-F conjugative transfer system secretin TraK | - |
| D8Z72_RS28900 () | 32053..33480 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| D8Z72_RS28905 () | 33470..34042 | + | 573 | WP_000002794.1 | conjugal transfer protein TraP | - |
| D8Z72_RS28910 () | 34039..34356 | + | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| D8Z72_RS28915 () | 34353..34604 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| D8Z72_RS28920 () | 34601..35116 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| D8Z72_RS28925 () | 35250..35471 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| D8Z72_RS28930 () | 35631..38258 | + | 2628 | WP_001064248.1 | type IV secretion system protein TraC | - |
| D8Z72_RS28935 () | 38255..38641 | + | 387 | WP_096975891.1 | type-F conjugative transfer system protein TrbI | - |
| D8Z72_RS28940 () | 38638..39270 | + | 633 | WP_063113346.1 | type-F conjugative transfer system protein TraW | - |
| D8Z72_RS28945 () | 39267..40259 | + | 993 | WP_151553453.1 | conjugal transfer pilus assembly protein TraU | - |
| D8Z72_RS28955 () | 40662..41184 | + | 523 | Protein_57 | hypothetical protein | - |
| D8Z72_RS28960 () | 41211..41849 | + | 639 | WP_151553458.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| D8Z72_RS28965 () | 41846..43696 | + | 1851 | WP_151553460.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| D8Z72_RS28970 () | 43723..43980 | + | 258 | WP_151553470.1 | conjugal transfer protein TrbE | - |
| D8Z72_RS28975 () | 43973..44716 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| D8Z72_RS28980 () | 44732..45079 | + | 348 | WP_001287895.1 | conjugal transfer protein TrbA | - |
| D8Z72_RS28985 () | 45198..45482 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| D8Z72_RS28990 () | 45469..46014 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| D8Z72_RS28995 () | 45944..46306 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| D8Z72_RS29000 () | 46306..47679 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| D8Z72_RS29005 () | 47676..50501 | + | 2826 | WP_001554363.1 | conjugal transfer mating pair stabilization protein TraG | - |
| D8Z72_RS29010 () | 50498..51007 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| D8Z72_RS29015 () | 51021..51752 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| D8Z72_RS29020 () | 52004..54265 | + | 2262 | WP_151553462.1 | type IV conjugative transfer system coupling protein TraD | - |
| D8Z72_RS29025 () | 54265..59535 | + | 5271 | WP_151553464.1 | conjugative transfer relaxase/helicase TraI | - |
| D8Z72_RS29030 () | 59555..60301 | + | 747 | WP_042111910.1 | conjugal transfer pilus acetylase TraX | - |
| D8Z72_RS29035 () | 60355..60915 | + | 561 | WP_001554368.1 | fertility inhibition protein FinO | - |
| D8Z72_RS29040 () | 61048..61260 | + | 213 | WP_005012601.1 | hypothetical protein | - |
| D8Z72_RS29045 () | 61505..61966 | + | 462 | WP_001233848.1 | thermonuclease family protein | - |
| D8Z72_RS29050 () | 62012..62221 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| D8Z72_RS29055 () | 62260..62850 | + | 591 | WP_151553466.1 | DUF2726 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|