MGE detailed information
MGE type: Prophage MGE length: 112258 bp
Accession: NZ_CP032793 Location: 2457353..2569610 Organism: Escherichia coli strain NZRM3614 Replicon: chromosome
Accession: NZ_CP032793 Location: 2457353..2569610 Organism: Escherichia coli strain NZRM3614 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z74_RS12405 () | 2453253..2454473 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| D8Z74_RS12410 () | 2454598..2455293 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| D8Z74_RS12415 () | 2455246..2456538 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| D8Z74_RS12420 () | 2456696..2457310 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| D8Z74_RS12425 () | 2457353..2458207 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| D8Z74_RS12430 () | 2458209..2458826 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| D8Z74_RS12435 () | 2458837..2461260 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| D8Z74_RS12440 () | 2461321..2463747 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| D8Z74_RS12445 () | 2463946..2464251 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| D8Z74_RS12450 () | 2464359..2465069 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| D8Z74_RS12455 () | 2465072..2465632 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| D8Z74_RS12460 () | 2465667..2466008 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| D8Z74_RS12465 () | 2466143..2466469 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| D8Z74_RS12475 () | 2467239..2467423 | - | 185 | Protein_2394 | DUF3596 domain-containing protein | - |
| D8Z74_RS12480 () | 2467458..2467709 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| D8Z74_RS12485 () | 2467782..2470226 | - | 2445 | WP_000102182.1 | exonuclease | - |
| D8Z74_RS12490 () | 2470319..2470507 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| D8Z74_RS12495 () | 2470504..2470692 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| D8Z74_RS12500 () | 2471180..2471332 | - | 153 | WP_000380314.1 | DUF1391 family protein | - |
| D8Z74_RS12505 () | 2471502..2471891 | - | 390 | WP_000367559.1 | helix-turn-helix domain-containing protein | - |
| D8Z74_RS12510 () | 2471994..2472269 | + | 276 | WP_024213789.1 | helix-turn-helix domain-containing protein | - |
| D8Z74_RS12515 () | 2472253..2472678 | + | 426 | WP_000693888.1 | Rha family transcriptional regulator | - |
| D8Z74_RS12520 () | 2472701..2473654 | + | 954 | WP_000095667.1 | helix-turn-helix domain-containing protein | - |
| D8Z74_RS12525 () | 2473661..2474401 | + | 741 | WP_000790456.1 | ATP-binding protein | - |
| D8Z74_RS12530 () | 2474431..2475201 | + | 771 | WP_025840156.1 | DUF1627 domain-containing protein | - |
| D8Z74_RS12535 () | 2475217..2475612 | + | 396 | WP_001118161.1 | DUF977 family protein | - |
| D8Z74_RS12540 () | 2475669..2476025 | + | 357 | WP_001302146.1 | hypothetical protein | - |
| D8Z74_RS12545 () | 2476074..2476286 | + | 213 | WP_000063625.1 | hypothetical protein | - |
| D8Z74_RS12550 () | 2476322..2476693 | + | 372 | WP_000137941.1 | hypothetical protein | - |
| D8Z74_RS12555 () | 2476690..2477052 | + | 363 | WP_000610379.1 | DUF551 domain-containing protein | - |
| D8Z74_RS12560 () | 2477168..2477272 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| D8Z74_RS12565 () | 2477518..2477673 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| D8Z74_RS27850 () | 2477952..2478119 | + | 168 | WP_000998188.1 | hypothetical protein | - |
| D8Z74_RS12570 () | 2478185..2478463 | + | 279 | WP_001304183.1 | hypothetical protein | - |
| D8Z74_RS12575 () | 2478465..2479514 | + | 1050 | WP_001302870.1 | DUF968 domain-containing protein | - |
| D8Z74_RS12580 () | 2479527..2479901 | + | 375 | WP_000904137.1 | RusA family crossover junction endodeoxyribonuclease | - |
| D8Z74_RS12585 () | 2479898..2480719 | + | 822 | WP_000762904.1 | antitermination protein | - |
| D8Z74_RS12590 () | 2480946..2481143 | + | 198 | WP_000917735.1 | hypothetical protein | - |
| D8Z74_RS12595 () | 2481294..2482352 | + | 1059 | WP_000483497.1 | site-specific DNA-methyltransferase | - |
| D8Z74_RS12600 () | 2482844..2484694 | + | 1851 | WP_024748518.1 | SASA family carbohydrate esterase | - |
| D8Z74_RS12605 () | 2485133..2485348 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| D8Z74_RS12610 () | 2485348..2485845 | + | 498 | WP_000075112.1 | lysozyme RrrD | - |
| D8Z74_RS12615 () | 2486062..2486247 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| D8Z74_RS12620 () | 2486774..2487088 | + | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| D8Z74_RS12625 () | 2487170..2487394 | - | 225 | WP_000074669.1 | YlcI/YnfO family protein | - |
| D8Z74_RS12630 () | 2487436..2487801 | + | 366 | WP_001303046.1 | HNH endonuclease | - |
| D8Z74_RS12635 () | 2488090..2488653 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| D8Z74_RS12640 () | 2488650..2490311 | + | 1662 | WP_115333667.1 | terminase large subunit | - |
| D8Z74_RS12645 () | 2490375..2492312 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| D8Z74_RS12650 () | 2492357..2492578 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| D8Z74_RS12655 () | 2492524..2495103 | + | 2580 | WP_115333682.1 | phage portal protein | - |
| D8Z74_RS12660 () | 2495106..2495432 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| D8Z74_RS12665 () | 2495442..2495792 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| D8Z74_RS12670 () | 2495789..2496235 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| D8Z74_RS12675 () | 2496232..2496576 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| D8Z74_RS12680 () | 2496635..2497351 | + | 717 | WP_001275508.1 | tail protein | - |
| D8Z74_RS12685 () | 2497357..2497731 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| D8Z74_RS12690 () | 2497827..2498036 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| D8Z74_RS12695 () | 2498089..2501331 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| D8Z74_RS12700 () | 2501324..2501665 | + | 342 | WP_000807954.1 | phage tail protein | - |
| D8Z74_RS12705 () | 2501665..2502102 | + | 438 | WP_001152128.1 | phage minor tail protein L | - |
| D8Z74_RS12715 () | 2503603..2507081 | + | 3479 | Protein_2443 | host specificity protein J | - |
| D8Z74_RS12725 () | 2507149..2507748 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| D8Z74_RS12730 () | 2507813..2509036 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| D8Z74_RS12735 () | 2509038..2509307 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| D8Z74_RS12740 () | 2509421..2509996 | + | 576 | WP_001131642.1 | hypothetical protein | VF |
| D8Z74_RS12750 () | 2510706..2511356 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| D8Z74_RS12755 () | 2511506..2511901 | + | 396 | Protein_2449 | IS256 family transposase ISEic2 | Transposase |
| D8Z74_RS12760 () | 2511939..2513477 | - | 1539 | WP_000998084.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z74_RS12765 () | 2513527..2513874 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z74_RS12770 () | 2513871..2514251 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z74_RS12775 () | 2514346..2515164 | + | 819 | Protein_2453 | IS256 family transposase IS1414 | Transposase |
| D8Z74_RS12780 () | 2515214..2515456 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| D8Z74_RS12785 () | 2515634..2516185 | - | 552 | Protein_2455 | Putative defective protein IntQ ; Integrase | Integrase |
| D8Z74_RS12790 () | 2516173..2517411 | - | 1239 | Protein_2456 | exonuclease | - |
| D8Z74_RS12795 () | 2517504..2517692 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| D8Z74_RS12800 () | 2517689..2517877 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| D8Z74_RS12810 () | 2518442..2518651 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| D8Z74_RS12815 () | 2518652..2519290 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| D8Z74_RS12820 () | 2519302..2519454 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| D8Z74_RS12825 () | 2519747..2520085 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| D8Z74_RS12830 () | 2520477..2520719 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| D8Z74_RS12835 () | 2520703..2521128 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| D8Z74_RS12840 () | 2521197..2522240 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| D8Z74_RS12845 () | 2522233..2522694 | + | 462 | WP_000139447.1 | replication protein | - |
| D8Z74_RS12850 () | 2522728..2523403 | + | 676 | Protein_2467 | DUF1627 domain-containing protein | - |
| D8Z74_RS12855 () | 2523436..2523717 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| D8Z74_RS12860 () | 2523714..2523941 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| D8Z74_RS12865 () | 2523934..2524245 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| D8Z74_RS12870 () | 2524373..2524591 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| D8Z74_RS12875 () | 2524593..2525150 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2525371..2525429 | - | 59 | - | - | Antitoxin Detail |
| D8Z74_RS12880 () | 2525441..2525596 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| D8Z74_RS12885 () | 2525716..2526060 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| D8Z74_RS12890 () | 2526182..2526454 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| D8Z74_RS12895 () | 2526456..2527505 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| D8Z74_RS12900 () | 2527518..2527823 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| D8Z74_RS12905 () | 2527886..2528440 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| D8Z74_RS12910 () | 2528665..2528862 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| D8Z74_RS12915 () | 2528998..2529711 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| D8Z74_RS12930 () | 2530162..2530593 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| D8Z74_RS12935 () | 2530590..2530845 | + | 256 | Protein_2482 | DUF3927 family protein | - |
| D8Z74_RS12940 () | 2531071..2532921 | + | 1851 | WP_064234946.1 | SASA family carbohydrate esterase | - |
| D8Z74_RS12945 () | 2533361..2533576 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| D8Z74_RS12950 () | 2533581..2533925 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| D8Z74_RS12955 () | 2533976..2534509 | + | 534 | WP_000992137.1 | lysozyme | - |
| D8Z74_RS12960 () | 2534780..2535349 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| D8Z74_RS12965 () | 2535349..2535495 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| D8Z74_RS12970 () | 2535718..2535903 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| D8Z74_RS12975 () | 2536429..2536743 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| D8Z74_RS12980 () | 2536825..2537049 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| D8Z74_RS12990 () | 2537436..2537981 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| D8Z74_RS12995 () | 2537956..2539881 | + | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| D8Z74_RS13000 () | 2539878..2540084 | + | 207 | WP_000198153.1 | gpW family protein | - |
| D8Z74_RS13005 () | 2540081..2541682 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| D8Z74_RS13010 () | 2541663..2542982 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| D8Z74_RS13015 () | 2542992..2543324 | + | 333 | WP_001295978.1 | head decoration protein | - |
| D8Z74_RS13020 () | 2543380..2544405 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| D8Z74_RS13025 () | 2544447..2544845 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| D8Z74_RS13030 () | 2544857..2545210 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| D8Z74_RS13035 () | 2545225..2545758 | + | 534 | WP_000975020.1 | phage tail protein | - |
| D8Z74_RS13040 () | 2545755..2546150 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| D8Z74_RS13045 () | 2546158..2546910 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| D8Z74_RS13050 () | 2546924..2547346 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| D8Z74_RS13055 () | 2547373..2547786 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| D8Z74_RS13060 () | 2547767..2550379 | + | 2613 | WP_097340392.1 | phage tail tape measure protein | - |
| D8Z74_RS13065 () | 2550376..2550705 | + | 330 | WP_000847298.1 | phage tail protein | - |
| D8Z74_RS13070 () | 2550705..2551403 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| D8Z74_RS13075 () | 2551414..2552157 | + | 744 | WP_072619021.1 | C40 family peptidase | - |
| D8Z74_RS13080 () | 2552103..2552735 | + | 633 | WP_134791867.1 | tail assembly protein | - |
| D8Z74_RS13085 () | 2552984..2556463 | + | 3480 | WP_000514788.1 | host specificity protein J | - |
| D8Z74_RS13090 () | 2556531..2557130 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| D8Z74_RS13095 () | 2557195..2558508 | + | 1314 | WP_024748460.1 | ISNCY family transposase KIS | Transposase |
| D8Z74_RS13100 () | 2558510..2558779 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| D8Z74_RS13105 () | 2558893..2559468 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| D8Z74_RS13110 () | 2559541..2560170 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| D8Z74_RS13115 () | 2560252..2560893 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| D8Z74_RS13125 () | 2561055..2561297 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| D8Z74_RS13130 () | 2561429..2562711 | + | 1283 | Protein_2519 | MHS family MFS transporter YdfJ | - |
| D8Z74_RS13135 () | 2562800..2564260 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| D8Z74_RS13140 () | 2564296..2564499 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| D8Z74_RS13145 () | 2564676..2565362 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| D8Z74_RS13150 () | 2565451..2566197 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| D8Z74_RS13155 () | 2566334..2568379 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| D8Z74_RS13160 () | 2568424..2568942 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| D8Z74_RS13165 () | 2569218..2569610 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| D8Z74_RS13170 () | 2569865..2570755 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| D8Z74_RS28065 () | 2570870..2570974 | - | 105 | WP_211180496.1 | protein MgtT | - |
| D8Z74_RS13175 () | 2570974..2571069 | - | 96 | WP_000901365.1 | protein MgtS | - |
| D8Z74_RS13180 () | 2571177..2572148 | - | 972 | WP_139120696.1 | transcriptional regulator FtrA | - |
| D8Z74_RS13185 () | 2572243..2572638 | + | 396 | WP_001271101.1 | rhodanese | - |
| D8Z74_RS13190 () | 2572679..2573866 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|