MGE detailed information
MGE type: Prophage MGE length: 75753 bp
Accession: NZ_CP032789 Location: 2237297..2313049 Organism: Escherichia coli strain NZRM4169 Replicon: chromosome
Accession: NZ_CP032789 Location: 2237297..2313049 Organism: Escherichia coli strain NZRM4169 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z76_RS11440 () | 2233380..2234021 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| D8Z76_RS11445 () | 2234077..2235255 | - | 1179 | WP_151538907.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| D8Z76_RS11450 () | 2235389..2235679 | + | 291 | WP_000257740.1 | DNA damage-inducible protein YebG | - |
| D8Z76_RS11455 () | 2235746..2236102 | + | 357 | WP_001295500.1 | protein YebF | - |
| D8Z76_RS11460 () | 2236429..2237088 | + | 660 | WP_000024742.1 | tellurite resistance TerB family protein | - |
| D8Z76_RS11465 () | 2237297..2239357 | + | 2061 | WP_000936917.1 | oligopeptidase B | - |
| D8Z76_RS11470 () | 2239354..2240016 | - | 663 | WP_000944243.1 | exodeoxyribonuclease X | - |
| D8Z76_RS11475 () | 2240040..2240696 | - | 657 | WP_000011656.1 | carbon-nitrogen hydrolase family protein | - |
| D8Z76_RS11480 () | 2240798..2241028 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| D8Z76_RS11485 () | 2241167..2241541 | + | 375 | WP_000168751.1 | CopC domain-containing protein YobA | - |
| D8Z76_RS11490 () | 2241545..2242417 | + | 873 | WP_000879314.1 | copper homeostasis membrane protein CopD | - |
| D8Z76_RS11495 () | 2242430..2242771 | + | 342 | WP_000976483.1 | YebY family protein | - |
| D8Z76_RS11500 () | 2243164..2244240 | - | 1077 | WP_001189085.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| D8Z76_RS11505 () | 2244206..2244487 | - | 282 | WP_005127484.1 | excisionase | - |
| D8Z76_RS11510 () | 2244594..2244782 | - | 189 | WP_151538908.1 | DUF1187 family protein | - |
| - () | 2244598..2244776 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2244598..2244776 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2244598..2244776 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2244598..2244776 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| D8Z76_RS11515 () | 2244775..2244969 | - | 195 | WP_010989194.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| D8Z76_RS11520 () | 2245033..2246085 | - | 1053 | WP_001004413.1 | recombinase RecT | - |
| D8Z76_RS11525 () | 2246097..2249246 | - | 3150 | WP_069192725.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| D8Z76_RS11530 () | 2249347..2249622 | - | 276 | WP_151538909.1 | hypothetical protein | - |
| D8Z76_RS11535 () | 2249697..2249867 | - | 171 | WP_000358365.1 | hypothetical protein | - |
| D8Z76_RS11540 () | 2249867..2250088 | - | 222 | WP_000560219.1 | cell division protein FtsZ | - |
| D8Z76_RS11545 () | 2250529..2251017 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| D8Z76_RS11550 () | 2251014..2251169 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| D8Z76_RS11555 () | 2251180..2251359 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| D8Z76_RS11565 () | 2251602..2252021 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| D8Z76_RS11570 () | 2252101..2252355 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| D8Z76_RS11575 () | 2252352..2252774 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| D8Z76_RS11580 () | 2252852..2253640 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| D8Z76_RS11585 () | 2253647..2254393 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| D8Z76_RS11590 () | 2254416..2255177 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| D8Z76_RS11595 () | 2255193..2255615 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| D8Z76_RS11600 () | 2255721..2255933 | + | 213 | WP_000935424.1 | hypothetical protein | - |
| D8Z76_RS11605 () | 2255966..2256184 | + | 219 | WP_000209148.1 | DUF4014 family protein | - |
| D8Z76_RS11610 () | 2256200..2256448 | + | 249 | Protein_2214 | hypothetical protein | - |
| D8Z76_RS11615 () | 2256459..2256620 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| D8Z76_RS11620 () | 2256699..2256944 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| D8Z76_RS11625 () | 2257376..2258527 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| D8Z76_RS11630 () | 2258495..2259484 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| D8Z76_RS11635 () | 2259484..2260875 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| D8Z76_RS11640 () | 2261375..2261974 | + | 600 | WP_069192817.1 | DUF1367 family protein | - |
| D8Z76_RS11645 () | 2261974..2262264 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| D8Z76_RS11650 () | 2262261..2262815 | + | 555 | WP_000640148.1 | DUF1133 family protein | - |
| D8Z76_RS11655 () | 2263089..2263670 | + | 582 | WP_000211416.1 | ORF6N domain-containing protein | - |
| D8Z76_RS11660 () | 2263913..2264110 | + | 198 | WP_001369585.1 | hypothetical protein | - |
| D8Z76_RS11665 () | 2264245..2264958 | + | 714 | WP_151538910.1 | helix-turn-helix domain-containing protein | - |
| D8Z76_RS11685 () | 2265406..2265837 | + | 432 | WP_044805529.1 | tellurite resistance TerB family protein | - |
| D8Z76_RS11690 () | 2265834..2266089 | + | 256 | Protein_2227 | DUF3927 family protein | - |
| D8Z76_RS11695 () | 2266316..2268253 | + | 1938 | WP_151538911.1 | DUF1737 domain-containing protein | - |
| D8Z76_RS11700 () | 2268391..2268570 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| D8Z76_RS11705 () | 2268611..2268856 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| D8Z76_RS11710 () | 2268934..2269149 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| D8Z76_RS11715 () | 2269154..2269738 | + | 585 | WP_000731215.1 | YdfR family protein | - |
| D8Z76_RS11720 () | 2269696..2270142 | + | 447 | Protein_2233 | hypothetical protein | - |
| D8Z76_RS11725 () | 2270179..2270712 | + | 534 | WP_032241040.1 | lysozyme | - |
| D8Z76_RS28710 () | 2270872..2271009 | + | 138 | WP_000459345.1 | hypothetical protein | - |
| D8Z76_RS11730 () | 2271011..2271478 | + | 468 | WP_032241041.1 | lysis protein | - |
| D8Z76_RS11745 () | 2271817..2272143 | + | 327 | WP_000828070.1 | TonB family protein | - |
| D8Z76_RS11750 () | 2272275..2272415 | - | 141 | WP_001340952.1 | YlcI/YnfO family protein | - |
| D8Z76_RS11755 () | 2272516..2272881 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| D8Z76_RS11760 () | 2273170..2273733 | + | 564 | WP_000958366.1 | terminase small subunit | - |
| D8Z76_RS11765 () | 2273730..2275391 | + | 1662 | WP_151538912.1 | terminase large subunit | - |
| D8Z76_RS11770 () | 2275455..2277392 | + | 1938 | WP_069722247.1 | phage major capsid protein | - |
| D8Z76_RS11775 () | 2277437..2277658 | + | 222 | WP_001063096.1 | hypothetical protein | - |
| D8Z76_RS11780 () | 2277604..2279765 | + | 2162 | Protein_2244 | phage portal protein | - |
| D8Z76_RS28715 () | 2279793..2280511 | + | 719 | Protein_2245 | phage portal protein | - |
| D8Z76_RS11795 () | 2280508..2280834 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| D8Z76_RS11800 () | 2280844..2281194 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| D8Z76_RS11805 () | 2281191..2281637 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| D8Z76_RS11810 () | 2281634..2281978 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| D8Z76_RS11815 () | 2282037..2282753 | + | 717 | WP_001275508.1 | tail protein | - |
| D8Z76_RS11820 () | 2282759..2283133 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| D8Z76_RS11825 () | 2283229..2283438 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| D8Z76_RS11830 () | 2283490..2286732 | + | 3243 | WP_151538894.1 | phage tail tape measure protein | - |
| D8Z76_RS11835 () | 2286725..2287066 | + | 342 | WP_000807954.1 | phage tail protein | - |
| D8Z76_RS11840 () | 2287066..2287764 | + | 699 | WP_151538913.1 | phage minor tail protein L | - |
| D8Z76_RS11845 () | 2287770..2288513 | + | 744 | WP_137540389.1 | C40 family peptidase | - |
| D8Z76_RS11850 () | 2288459..2289091 | + | 633 | WP_151539051.1 | tail assembly protein | - |
| D8Z76_RS11855 () | 2289338..2292814 | + | 3477 | WP_151538915.1 | host specificity protein J | - |
| D8Z76_RS11860 () | 2292883..2293506 | + | 624 | WP_001360257.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| D8Z76_RS11865 () | 2293571..2294884 | + | 1314 | WP_151538917.1 | phage tail protein | - |
| D8Z76_RS11870 () | 2294886..2295155 | + | 270 | WP_053921583.1 | phage tail fiber C-terminal domain-containing protein | - |
| D8Z76_RS11885 () | 2295558..2296571 | + | 1014 | WP_122993102.1 | M85 family metallopeptidase | - |
| - () | 2297139..2297169 | + | 31 | - | - | Toxin Detail |
| - () | 2297139..2297207 | - | 69 | - | - | Antitoxin Detail |
| D8Z76_RS11890 () | 2297304..2297960 | + | 657 | WP_000812736.1 | protein-serine/threonine phosphatase | - |
| D8Z76_RS11895 () | 2297961..2298152 | - | 192 | WP_001296140.1 | YebW family protein | - |
| D8Z76_RS11900 () | 2298257..2298493 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| D8Z76_RS11905 () | 2298611..2300050 | - | 1440 | WP_001302304.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| D8Z76_RS11910 () | 2300131..2302764 | - | 2634 | WP_001302055.1 | lipid-binding membrane homeostasis protein YebT | - |
| D8Z76_RS11915 () | 2302733..2304016 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| D8Z76_RS11920 () | 2304146..2304643 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| D8Z76_RS11925 () | 2304740..2305438 | + | 699 | WP_000431368.1 | RNA chaperone ProQ | - |
| D8Z76_RS11930 () | 2305458..2307506 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| D8Z76_RS11935 () | 2307698..2308579 | + | 882 | WP_000984517.1 | protease HtpX | - |
| D8Z76_RS11940 () | 2308625..2309998 | - | 1374 | WP_001127211.1 | MFS transporter | - |
| D8Z76_RS11945 () | 2310175..2310966 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| D8Z76_RS11950 () | 2311110..2311349 | - | 240 | WP_001211007.1 | membrane protein | - |
| D8Z76_RS11955 () | 2311509..2311652 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| D8Z76_RS11960 () | 2311727..2312014 | + | 288 | WP_001006862.1 | YebO family protein | - |
| D8Z76_RS11965 () | 2312684..2312827 | + | 144 | WP_001295496.1 | YobF family protein | - |
| D8Z76_RS11970 () | 2312840..2313049 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| D8Z76_RS11975 () | 2313215..2314024 | + | 810 | WP_000010147.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| D8Z76_RS11980 () | 2314021..2314587 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| D8Z76_RS11985 () | 2315017..2315475 | - | 459 | WP_000156258.1 | DUF986 family protein | - |
| D8Z76_RS11990 () | 2315530..2316381 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| D8Z76_RS11995 () | 2316394..2317194 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|