MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 26350 bp
Accession: NZ_CP032615 Location: 1..26350 Organism: Pseudomonas sp. DY-1 Replicon: plasmid p.1
Accession: NZ_CP032615 Location: 1..26350 Organism: Pseudomonas sp. DY-1 Replicon: plasmid p.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D6Z43_RS27725 () | 500..808 | + | 309 | WP_120649759.1 | hypothetical protein | - |
| D6Z43_RS00010 () | 840..1208 | + | 369 | WP_162945784.1 | hypothetical protein | - |
| D6Z43_RS00015 () | 1208..1533 | + | 326 | Protein_3 | DUF2523 domain-containing protein | - |
| D6Z43_RS00020 () | 1546..2721 | + | 1176 | WP_120649738.1 | zonular occludens toxin | - |
| D6Z43_RS00025 () | 2887..4164 | + | 1278 | WP_120649739.1 | hypothetical protein | - |
| D6Z43_RS00030 () | 4146..5171 | + | 1026 | WP_120649740.1 | tyrosine-type recombinase/integrase | - |
| D6Z43_RS00035 () | 5215..5529 | + | 315 | WP_120649741.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D6Z43_RS00040 () | 5535..5822 | + | 288 | WP_120649742.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| D6Z43_RS00045 () | 6147..6899 | + | 753 | WP_120649743.1 | hypothetical protein | - |
| D6Z43_RS00050 () | 7054..8241 | - | 1188 | WP_120649744.1 | hypothetical protein | - |
| D6Z43_RS00055 () | 8250..9428 | - | 1179 | WP_120649745.1 | hypothetical protein | - |
| D6Z43_RS00060 () | 9568..9843 | - | 276 | WP_120649746.1 | helix-turn-helix transcriptional regulator | - |
| D6Z43_RS00065 () | 9971..10186 | + | 216 | WP_120649747.1 | DNA-binding protein | - |
| D6Z43_RS00070 () | 10183..10473 | + | 291 | WP_120649748.1 | hypothetical protein | - |
| D6Z43_RS00075 () | 10533..10700 | + | 168 | WP_120649749.1 | DNA-binding protein | - |
| D6Z43_RS00080 () | 10704..10990 | + | 287 | Protein_16 | DUF5447 family protein | - |
| D6Z43_RS00085 () | 10994..11206 | + | 213 | WP_120649750.1 | hypothetical protein | - |
| D6Z43_RS00090 () | 11454..11807 | + | 354 | WP_120649751.1 | hypothetical protein | - |
| D6Z43_RS27730 () | 11825..11992 | + | 168 | WP_162945785.1 | hypothetical protein | - |
| D6Z43_RS00100 () | 12214..12420 | + | 207 | WP_120649752.1 | phage coat protein | - |
| D6Z43_RS00105 () | 12905..13978 | + | 1074 | WP_120649753.1 | hypothetical protein | - |
| D6Z43_RS00110 () | 13978..14304 | + | 327 | WP_120649754.1 | DUF2523 domain-containing protein | - |
| D6Z43_RS00115 () | 14317..15492 | + | 1176 | WP_120649738.1 | zonular occludens toxin | - |
| D6Z43_RS00120 () | 15658..16935 | + | 1278 | WP_120649739.1 | hypothetical protein | - |
| D6Z43_RS00125 () | 16917..17942 | + | 1026 | WP_120649740.1 | tyrosine-type recombinase/integrase | - |
| D6Z43_RS00130 () | 17986..18300 | + | 315 | WP_120649741.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D6Z43_RS00135 () | 18306..18593 | + | 288 | WP_120649742.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| D6Z43_RS00140 () | 18918..19670 | + | 753 | WP_120649743.1 | hypothetical protein | - |
| D6Z43_RS00145 () | 19824..21011 | - | 1188 | WP_120649744.1 | hypothetical protein | - |
| D6Z43_RS00150 () | 21020..22198 | - | 1179 | WP_120649745.1 | hypothetical protein | - |
| D6Z43_RS00155 () | 22338..22613 | - | 276 | WP_120649746.1 | helix-turn-helix transcriptional regulator | - |
| D6Z43_RS00160 () | 22741..22956 | + | 216 | WP_120649747.1 | DNA-binding protein | - |
| D6Z43_RS00165 () | 22953..23243 | + | 291 | WP_120649748.1 | hypothetical protein | - |
| D6Z43_RS00170 () | 23247..23471 | + | 225 | WP_120649755.1 | DNA-binding protein | - |
| D6Z43_RS00175 () | 23475..23762 | + | 288 | WP_120649756.1 | DUF5447 family protein | - |
| D6Z43_RS00180 () | 23766..23978 | + | 213 | WP_120649750.1 | hypothetical protein | - |
| D6Z43_RS00185 () | 24226..24579 | + | 354 | WP_120649751.1 | hypothetical protein | - |
| D6Z43_RS27735 () | 24598..24765 | + | 168 | WP_162945785.1 | hypothetical protein | - |
| D6Z43_RS00190 () | 24762..24977 | + | 216 | WP_120649757.1 | hypothetical protein | - |
| D6Z43_RS00195 () | 24989..25195 | + | 207 | WP_120649752.1 | phage coat protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|