MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 86046 bp
Accession: NZ_CP032552 Location: 5459604..5545649 Organism: Pseudomonas aeruginosa strain PA34 Replicon: chromosome
Accession: NZ_CP032552 Location: 5459604..5545649 Organism: Pseudomonas aeruginosa strain PA34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA34_RS26180 () | 5455120..5459373 | + | 4254 | WP_033989049.1 | two-partner secretion system exoprotein TpsA4 | - |
| PA34_RS26190 () | 5459741..5460601 | + | 861 | WP_023094840.1 | ParA family protein | - |
| PA34_RS26195 () | 5460603..5461337 | + | 735 | WP_033945060.1 | hypothetical protein | - |
| PA34_RS26200 () | 5461334..5461831 | + | 498 | WP_023104182.1 | hypothetical protein | - |
| PA34_RS33070 () | 5461837..5462259 | + | 423 | Protein_5054 | hypothetical protein | - |
| PA34_RS26210 () | 5462715..5463401 | + | 687 | WP_033986839.1 | hypothetical protein | - |
| PA34_RS26215 () | 5463401..5464102 | + | 702 | WP_033986841.1 | DUF2786 domain-containing protein | - |
| PA34_RS26220 () | 5464099..5464807 | + | 709 | Protein_5057 | HNH endonuclease | - |
| PA34_RS26225 () | 5464791..5465015 | + | 225 | WP_009315888.1 | hypothetical protein | - |
| PA34_RS26230 () | 5465012..5466355 | + | 1344 | WP_033945051.1 | replicative DNA helicase | - |
| PA34_RS32930 () | 5466352..5466942 | + | 591 | WP_058199331.1 | hypothetical protein | - |
| PA34_RS26240 () | 5467319..5467504 | + | 186 | WP_033945048.1 | hypothetical protein | - |
| PA34_RS26245 () | 5467494..5468021 | + | 528 | WP_003141385.1 | hypothetical protein | - |
| PA34_RS26250 () | 5468018..5468275 | + | 258 | WP_003134081.1 | hypothetical protein | - |
| PA34_RS32935 () | 5468268..5468762 | + | 495 | WP_003134082.1 | hypothetical protein | - |
| PA34_RS26255 () | 5468755..5468988 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PA34_RS26260 () | 5468988..5470004 | + | 1017 | WP_033945047.1 | nucleoid-associated protein YejK | - |
| PA34_RS26265 () | 5470007..5470255 | + | 249 | WP_016254076.1 | Arc family DNA-binding protein | - |
| PA34_RS26270 () | 5470252..5471988 | + | 1737 | WP_033945045.1 | ParB family protein | - |
| PA34_RS26275 () | 5472016..5472783 | + | 768 | WP_016264254.1 | DUF2857 domain-containing protein | - |
| PA34_RS26280 () | 5472780..5474105 | + | 1326 | WP_034008366.1 | hypothetical protein | - |
| PA34_RS32940 () | 5474148..5474828 | + | 681 | WP_154112681.1 | hypothetical protein | - |
| PA34_RS26290 () | 5474841..5475569 | + | 729 | WP_031275718.1 | TIGR03761 family integrating conjugative element protein | - |
| PA34_RS26295 () | 5475575..5476108 | + | 534 | WP_003134105.1 | DUF3158 family protein | - |
| PA34_RS26300 () | 5476122..5476610 | + | 489 | WP_003134107.1 | single-stranded DNA-binding protein | - |
| PA34_RS26305 () | 5476714..5476908 | + | 195 | WP_033945044.1 | hypothetical protein | - |
| PA34_RS26310 () | 5477152..5477319 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| PA34_RS26315 () | 5477385..5477603 | - | 219 | WP_033945042.1 | hypothetical protein | - |
| PA34_RS26320 () | 5477620..5477814 | - | 195 | WP_023094845.1 | hypothetical protein | - |
| PA34_RS26325 () | 5477830..5478240 | - | 411 | WP_033945041.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PA34_RS26330 () | 5478240..5478482 | - | 243 | WP_168928567.1 | antitoxin | Antitoxin Detail |
| PA34_RS26335 () | 5478788..5480707 | + | 1920 | WP_033945040.1 | type I DNA topoisomerase | - |
| PA34_RS26340 () | 5480715..5481467 | + | 753 | WP_033945033.1 | hypothetical protein | - |
| PA34_RS26345 () | 5481584..5482189 | - | 606 | WP_033945032.1 | LysE family translocator | - |
| PA34_RS26350 () | 5482311..5483180 | + | 870 | WP_023094849.1 | HTH-type transcriptional regulator MetR | VF |
| PA34_RS26355 () | 5483624..5485513 | + | 1890 | WP_033945085.1 | hypothetical protein | - |
| PA34_RS26360 () | 5485510..5487486 | + | 1977 | WP_114249722.1 | DEAD/DEAH box helicase | - |
| PA34_RS26365 () | 5487625..5487960 | + | 336 | WP_022579623.1 | hypothetical protein | - |
| PA34_RS26370 () | 5488043..5488333 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| PA34_RS26375 () | 5488330..5488629 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA34_RS26380 () | 5488831..5489943 | + | 1113 | WP_114249721.1 | hypothetical protein | VF |
| PA34_RS26385 () | 5489943..5491652 | + | 1710 | WP_114249720.1 | Outer membrane lipoprotein BfpB | VF |
| PA34_RS26390 () | 5491656..5492981 | + | 1326 | WP_033942384.1 | type 4b pilus protein PilO2 | - |
| PA34_RS26395 () | 5492971..5493504 | + | 534 | WP_023094340.1 | type IV pilus biogenesis protein PilP | - |
| PA34_RS26400 () | 5493513..5495093 | + | 1581 | WP_063896706.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| PA34_RS26405 () | 5495093..5496172 | + | 1080 | WP_003123335.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PA34_RS26410 () | 5496194..5496724 | + | 531 | WP_003120996.1 | pilus assembly protein PilX | - |
| PA34_RS26415 () | 5496721..5497677 | + | 957 | WP_003448639.1 | Twitching mobility protein | VF |
| PA34_RS26420 () | 5497670..5499049 | + | 1380 | WP_003099769.1 | hypothetical protein | VF |
| PA34_RS26425 () | 5499067..5499504 | + | 438 | WP_003120998.1 | hypothetical protein | VF |
| PA34_RS26435 () | 5500426..5500992 | + | 567 | WP_003120999.1 | hypothetical protein | - |
| PA34_RS26440 () | 5501069..5501248 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| PA34_RS26445 () | 5501707..5502195 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| PA34_RS32945 () | 5502333..5502491 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| PA34_RS26450 () | 5502565..5502762 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| PA34_RS26455 () | 5502954..5503667 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| PA34_RS26460 () | 5503903..5504253 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| PA34_RS26465 () | 5504310..5504942 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| PA34_RS26475 () | 5505214..5505576 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| PA34_RS26480 () | 5505644..5505904 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| PA34_RS26485 () | 5505997..5506602 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| PA34_RS26490 () | 5506632..5508077 | + | 1446 | WP_003099801.1 | class I SAM-dependent methyltransferase | - |
| PA34_RS26495 () | 5508182..5510431 | + | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| PA34_RS26500 () | 5510752..5511006 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| PA34_RS26515 () | 5511647..5511844 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| PA34_RS26520 () | 5512062..5512754 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| PA34_RS26525 () | 5512765..5513520 | + | 756 | WP_003086180.1 | TIGR03759 family integrating conjugative element protein | - |
| PA34_RS26530 () | 5513505..5514086 | + | 582 | WP_003086178.1 | hypothetical protein | - |
| PA34_RS26535 () | 5514083..5514583 | + | 501 | WP_003086176.1 | integrating conjugative element protein | - |
| PA34_RS26540 () | 5514592..5514861 | + | 270 | WP_003086175.1 | hypothetical protein | - |
| PA34_RS26545 () | 5514865..5517096 | + | 2232 | WP_003086174.1 | type IV conjugative transfer system coupling protein TraD | - |
| PA34_RS26550 () | 5517096..5517842 | + | 747 | WP_009316301.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PA34_RS26555 () | 5517860..5518351 | + | 492 | WP_023980742.1 | hypothetical protein | - |
| PA34_RS26560 () | 5518592..5520073 | + | 1482 | WP_012076865.1 | UvrD-helicase domain-containing protein | - |
| PA34_RS32950 () | 5520204..5521313 | + | 1110 | WP_023082058.1 | hypothetical protein | - |
| PA34_RS26570 () | 5521358..5521669 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| PA34_RS26575 () | 5521842..5522141 | + | 300 | WP_003109393.1 | hypothetical protein | - |
| PA34_RS26580 () | 5522234..5522572 | + | 339 | WP_020751097.1 | RAQPRD family integrative conjugative element protein | - |
| PA34_RS26585 () | 5522569..5522808 | + | 240 | WP_023443559.1 | TIGR03758 family integrating conjugative element protein | - |
| PA34_RS26590 () | 5522826..5523182 | + | 357 | WP_003109398.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PA34_RS26595 () | 5523193..5523579 | + | 387 | WP_003109399.1 | TIGR03750 family conjugal transfer protein | - |
| PA34_RS26600 () | 5523576..5524235 | + | 660 | WP_003109400.1 | TIGR03746 family integrating conjugative element protein | - |
| PA34_RS26605 () | 5524232..5525116 | + | 885 | WP_003109401.1 | TIGR03749 family integrating conjugative element protein | - |
| PA34_RS26610 () | 5525100..5526605 | + | 1506 | WP_020751098.1 | TIGR03752 family integrating conjugative element protein | - |
| PA34_RS26615 () | 5526583..5527026 | + | 444 | WP_020751099.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PA34_RS26620 () | 5527026..5529968 | + | 2943 | WP_020751100.1 | conjugative transfer ATPase | - |
| PA34_RS26625 () | 5529965..5530249 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| PA34_RS26630 () | 5530246..5530905 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| PA34_RS26635 () | 5530902..5531120 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| PA34_RS26650 () | 5533259..5533690 | + | 432 | WP_003456706.1 | TIGR03757 family integrating conjugative element protein | - |
| PA34_RS26655 () | 5533690..5534628 | + | 939 | WP_003456709.1 | TIGR03756 family integrating conjugative element protein | - |
| PA34_RS26660 () | 5534646..5536034 | + | 1389 | WP_023108760.1 | integrating conjugative element protein | - |
| PA34_RS26665 () | 5536034..5536378 | + | 345 | WP_003456714.1 | hypothetical protein | - |
| PA34_RS26670 () | 5536375..5537907 | + | 1533 | WP_023108761.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PA34_RS26675 () | 5537952..5538308 | - | 357 | WP_003111731.1 | hypothetical protein | - |
| PA34_RS26680 () | 5538427..5538699 | + | 273 | WP_022580142.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PA34_RS26685 () | 5538703..5539062 | + | 360 | WP_012076884.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PA34_RS26690 () | 5539072..5539989 | - | 918 | WP_023082681.1 | hypothetical protein | - |
| PA34_RS26695 () | 5540015..5540254 | - | 240 | WP_023082682.1 | hypothetical protein | - |
| PA34_RS26700 () | 5540638..5541888 | + | 1251 | WP_003119430.1 | IS256 family transposase ISRso7 | Transposase |
| PA34_RS26705 () | 5542048..5543970 | + | 1923 | WP_022580137.1 | helicase/relaxase domain-containing protein | - |
| PA34_RS26710 () | 5543967..5545268 | + | 1302 | WP_003454526.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| PA34_RS26730 () | 5546087..5548651 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| PA34_RS26735 () | 5548807..5549535 | - | 729 | WP_003094684.1 | peptidoglycan editing factor PgeF | - |
| PA34_RS26740 () | 5549532..5550494 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|