MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88392 bp
Accession: NZ_CP032425 Location: 1..88392 Organism: Escherichia coli strain SCEC020001 Replicon: plasmid pOXA1_020001
Accession: NZ_CP032425 Location: 1..88392 Organism: Escherichia coli strain SCEC020001 Replicon: plasmid pOXA1_020001
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7V21_RS00380 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| C7V21_RS00385 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| C7V21_RS00390 () | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| C7V21_RS00395 () | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| C7V21_RS00400 () | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| C7V21_RS00405 () | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| C7V21_RS00410 () | 5492..5928 | - | 437 | Protein_6 | IS3 family transposase IS2 | Transposase |
| C7V21_RS00415 () | 6210..8180 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| C7V21_RS00420 () | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| C7V21_RS00425 () | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| C7V21_RS00430 () | 9717..10499 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| C7V21_RS00435 () | 10496..11518 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| C7V21_RS00445 () | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| C7V21_RS00450 () | 12598..12972 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| C7V21_RS00455 () | 12997..13701 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C7V21_RS00460 () | 13755..14195 | - | 441 | Protein_15 | CatB-related O-acetyltransferase | - |
| C7V21_RS00465 () | 14333..15163 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| C7V21_RS00470 () | 15294..15848 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| C7V21_RS00475 () | 15992..16696 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C7V21_RS00480 () | 16762..18276 | + | 1515 | Protein_19 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C7V21_RS00485 () | 18318..18560 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| C7V21_RS00490 () | 18592..19242 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C7V21_RS00495 () | 19348..20547 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| C7V21_RS00500 () | 20579..21463 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| C7V21_RS00505 () | 21601..22008 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| C7V21_RS00510 () | 21997..22746 | + | 750 | Protein_25 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C7V21_RS00515 () | 22770..23375 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| C7V21_RS00520 () | 23470..26367 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| C7V21_RS00530 () | 26504..26905 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| C7V21_RS25350 () | 26838..27095 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| C7V21_RS00535 () | 27188..27841 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| C7V21_RS00545 () | 28780..29637 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| C7V21_RS00550 () | 29630..29704 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C7V21_RS00560 () | 29939..30196 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| C7V21_RS00565 () | 30601..31623 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| C7V21_RS00570 () | 32095..32448 | + | 354 | WP_000005489.1 | hypothetical protein | - |
| C7V21_RS00575 () | 32861..33439 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| C7V21_RS00580 () | 33472..34169 | + | 698 | Protein_37 | IS1 family transposase IS1A | Transposase |
| C7V21_RS00585 () | 34278..34640 | + | 363 | WP_059330006.1 | IS66 family transposase ISEc23 | Transposase |
| C7V21_RS00590 () | 34637..34987 | + | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
| C7V21_RS00595 () | 35018..35239 | + | 222 | WP_000080227.1 | IS66 family transposase ISEc43 | Transposase |
| C7V21_RS00600 () | 35191..35532 | + | 342 | Protein_41 | IS66 family transposase IS682 | Transposase |
| C7V21_RS00605 () | 35596..36075 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| C7V21_RS00610 () | 36156..37559 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
| C7V21_RS00615 () | 37607..38611 | - | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| C7V21_RS00620 () | 38696..39607 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| C7V21_RS00625 () | 39618..40838 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| C7V21_RS00630 () | 41731..42213 | + | 483 | Protein_47 | VENN motif pre-toxin domain-containing protein | - |
| C7V21_RS00635 () | 42159..42605 | - | 447 | Protein_48 | incFII family plasmid replication initiator RepA | - |
| C7V21_RS00640 () | 42598..42672 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| C7V21_RS00650 () | 42908..43165 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| C7V21_RS00655 () | 43449..43655 | - | 207 | WP_015387399.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 43642..43703 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43642..43703 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43642..43703 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43642..43703 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| C7V21_RS00665 () | 43842..44024 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| C7V21_RS00670 () | 44125..44741 | + | 617 | Protein_53 | IS1 family transposase | - |
| C7V21_RS00675 () | 44779..46350 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| C7V21_RS00680 () | 46370..46717 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| C7V21_RS00685 () | 46717..47394 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| C7V21_RS25645 () | 47449..47538 | + | 90 | Protein_57 | IS1 family transposase | - |
| C7V21_RS00700 () | 47839..48051 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| C7V21_RS00705 () | 48185..48745 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| C7V21_RS00710 () | 48800..49546 | - | 747 | WP_023149624.1 | conjugal transfer pilus acetylase TraX | - |
| C7V21_RS00715 () | 49566..51518 | - | 1953 | Protein_61 | Multifunctional conjugation protein TraI | Relaxase |
| C7V21_RS00720 () | 51615..52795 | - | 1181 | Protein_62 | hydrolase | - |
| C7V21_RS00725 () | 52847..53077 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| C7V21_RS00735 () | 53589..53837 | + | 249 | WP_071781657.1 | hypothetical protein | - |
| C7V21_RS00740 () | 54109..54300 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| C7V21_RS00745 () | 54297..54719 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C7V21_RS00750 () | 54766..55068 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| C7V21_RS00765 () | 55605..56375 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| C7V21_RS00770 () | 56420..56854 | - | 435 | WP_001546462.1 | DUF1380 family protein | - |
| C7V21_RS00775 () | 56868..57089 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| C7V21_RS00780 () | 57090..57773 | - | 684 | WP_032181561.1 | DNA methylase | - |
| C7V21_RS00785 () | 57850..58154 | - | 305 | Protein_72 | hypothetical protein | - |
| C7V21_RS00790 () | 58158..59060 | - | 903 | WP_087526123.1 | DUF1281 domain-containing protein | - |
| C7V21_RS00800 () | 59798..60769 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C7V21_RS00805 () | 60769..61935 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C7V21_RS00810 () | 62523..63278 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| C7V21_RS00815 () | 64000..64806 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| C7V21_RS00820 () | 64807..65112 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C7V21_RS00825 () | 65114..65332 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C7V21_RS00835 () | 65892..66122 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C7V21_RS00840 () | 66119..66535 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C7V21_RS00845 () | 66610..68175 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| C7V21_RS00850 () | 68160..69182 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| C7V21_RS00855 () | 69436..70133 | - | 698 | Protein_84 | IS1 family transposase IS1A | Transposase |
| C7V21_RS00865 () | 70659..72860 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| C7V21_RS00870 () | 72942..74219 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| C7V21_RS00875 () | 74216..75958 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| C7V21_RS00880 () | 75958..76905 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| C7V21_RS00885 () | 76906..78630 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| C7V21_RS00890 () | 78766..79959 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| C7V21_RS00895 () | 80339..80719 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| C7V21_RS00905 () | 81060..81473 | - | 414 | Protein_92 | phosphopyruvate hydratase | - |
| C7V21_RS00910 () | 81471..81728 | + | 258 | Protein_93 | Tn3 family transposase | - |
| C7V21_RS00915 () | 81962..82819 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| C7V21_RS00920 () | 82816..83673 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| C7V21_RS00925 () | 83670..84497 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| C7V21_RS00930 () | 84497..85411 | - | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| C7V21_RS00940 () | 85767..86464 | + | 698 | Protein_98 | IS1 family transposase IS1A | Transposase |
| C7V21_RS00945 () | 86644..87157 | - | 514 | Protein_99 | DUF4113 domain-containing protein | - |
| C7V21_RS25650 () | 87218..87322 | - | 105 | Protein_100 | AAA family ATPase | - |
| C7V21_RS00955 () | 87324..87647 | - | 324 | Protein_101 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|