MGE detailed information
MGE type: IS/Tn MGE length: 366 bp
Accession: NZ_CP032329 Location: 4234986..4235351 Organism: Xenorhabdus nematophila strain YL001 Replicon: chromosome
Accession: NZ_CP032329 Location: 4234986..4235351 Organism: Xenorhabdus nematophila strain YL001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3790_RS19455 () | 4230937..4232082 | - | 1146 | WP_162903994.1 | porin | - |
| D3790_RS19460 () | 4232629..4233267 | + | 639 | WP_010846277.1 | TetR/AcrR family transcriptional regulator | - |
| D3790_RS20050 () | 4233512..4233745 | - | 234 | WP_038251312.1 | hypothetical protein | - |
| D3790_RS20055 () | 4233888..4234064 | - | 177 | WP_161783437.1 | hypothetical protein | - |
| D3790_RS19470 () | 4234174..4234392 | + | 219 | WP_038219275.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| D3790_RS19475 () | 4234393..4234701 | + | 309 | WP_038251308.1 | CcdB family protein | Toxin Detail |
| D3790_RS19480 () | 4234986..4235351 | + | 366 | WP_081990783.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| D3790_RS19485 () | 4235610..4236287 | + | 678 | WP_010846273.1 | hypothetical protein | - |
| D3790_RS19490 () | 4236433..4237485 | - | 1053 | WP_013185288.1 | alpha-xenorhabdolysin subunit XaxB | - |
| D3790_RS19495 () | 4237526..4238752 | - | 1227 | WP_041976500.1 | alpha-xenorhabdolysin subunit XaxA | - |
| D3790_RS19505 () | 4239340..4239765 | - | 426 | WP_010846269.1 | TonB system transport protein ExbD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xenorhabdus nematophila ATCC 19061 | IS/Tn | TA24804 | NC_014228 | 3627715..3628080 | 0.002 |