MGE detailed information
MGE type: Prophage MGE length: 104333 bp
Accession: NZ_CP032296 Location: 741821..846153 Organism: Rahnella aquatilis strain ZF7 Replicon: chromosome
Accession: NZ_CP032296 Location: 741821..846153 Organism: Rahnella aquatilis strain ZF7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3Z09_RS03435 () | 737160..737465 | + | 306 | WP_173362082.1 | DUF3561 family protein | - |
| D3Z09_RS03440 () | 737633..737953 | + | 321 | WP_013574012.1 | cell division protein FtsB | - |
| D3Z09_RS03445 () | 737956..738675 | + | 720 | WP_013574013.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| D3Z09_RS03450 () | 738675..739148 | + | 474 | WP_013574014.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| D3Z09_RS03455 () | 739171..740217 | + | 1047 | WP_162906091.1 | tRNA pseudouridine(13) synthase TruD | - |
| D3Z09_RS03460 () | 740198..740962 | + | 765 | WP_013574016.1 | 5'/3'-nucleotidase SurE | - |
| D3Z09_RS03465 () | 740952..741578 | + | 627 | WP_037034145.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
| D3Z09_RS03470 () | 741821..742843 | + | 1023 | WP_013574018.1 | murein hydrolase activator NlpD | - |
| D3Z09_RS03475 () | 742895..743881 | + | 987 | WP_013574019.1 | RNA polymerase sigma factor RpoS | - |
| D3Z09_RS03480 () | 743980..746535 | - | 2556 | WP_112152126.1 | DNA mismatch repair protein MutS | - |
| D3Z09_RS03485 () | 746958..749618 | + | 2661 | WP_013574021.1 | hypothetical protein | - |
| D3Z09_RS03490 () | 749773..750876 | + | 1104 | WP_013574022.1 | lytic murein transglycosylase B | - |
| D3Z09_RS03495 () | 751038..751532 | + | 495 | WP_013574023.1 | nicotinamide-nucleotide amidase | - |
| D3Z09_RS03500 () | 751640..752704 | + | 1065 | WP_013574024.1 | recombinase RecA | - |
| D3Z09_RS03505 () | 752948..753514 | + | 567 | WP_187514555.1 | recombination regulator RecX | - |
| D3Z09_RS03515 () | 753653..756280 | + | 2628 | WP_119261248.1 | alanine--tRNA ligase | - |
| D3Z09_RS03520 () | 756537..756722 | + | 186 | WP_013574027.1 | carbon storage regulator CsrA | - |
| D3Z09_RS03545 () | 758021..758587 | + | 567 | WP_112152129.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| D3Z09_RS03550 () | 758584..759012 | + | 429 | WP_013574029.1 | DedA family protein | - |
| D3Z09_RS03555 () | 759098..760669 | + | 1572 | WP_013574030.1 | glutamate--cysteine ligase | - |
| D3Z09_RS03560 () | 760827..761342 | + | 516 | WP_013574031.1 | hypothetical protein | VF |
| D3Z09_RS03565 () | 761412..762701 | - | 1290 | WP_013574032.1 | HlyC/CorC family transporter | - |
| D3Z09_RS03570 () | 762718..763509 | - | 792 | WP_013574033.1 | inner membrane protein YpjD | - |
| D3Z09_RS03575 () | 763674..765035 | + | 1362 | WP_013574034.1 | signal recognition particle protein | - |
| D3Z09_RS03580 () | 765214..765462 | + | 249 | WP_015689395.1 | 30S ribosomal protein S16 | - |
| D3Z09_RS03585 () | 765481..766029 | + | 549 | WP_013574036.1 | ribosome maturation factor RimM | - |
| D3Z09_RS03590 () | 766097..766870 | + | 774 | WP_013574037.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| D3Z09_RS03595 () | 766919..767266 | + | 348 | WP_013574038.1 | 50S ribosomal protein L19 | - |
| D3Z09_RS03600 () | 767358..767537 | - | 180 | WP_013574039.1 | ogr/Delta-like zinc finger family protein | - |
| D3Z09_RS03605 () | 767602..768702 | - | 1101 | WP_119261249.1 | phage tail protein | - |
| D3Z09_RS03610 () | 768705..769175 | - | 471 | WP_015689398.1 | phage tail protein | - |
| D3Z09_RS03615 () | 769172..770803 | - | 1632 | WP_119261250.1 | phage tail tape measure protein | - |
| D3Z09_RS03620 () | 770796..770918 | - | 123 | WP_015689400.1 | GpE family phage tail protein | - |
| D3Z09_RS03625 () | 770951..771238 | - | 288 | WP_013574044.1 | phage tail assembly protein | - |
| D3Z09_RS03630 () | 771298..771807 | - | 510 | WP_013574045.1 | phage major tail tube protein | - |
| D3Z09_RS03635 () | 771822..772991 | - | 1170 | WP_013574046.1 | phage tail sheath protein | - |
| D3Z09_RS03640 () | 773133..773681 | - | 549 | WP_119261251.1 | tail fiber assembly protein | - |
| D3Z09_RS03645 () | 773678..775054 | - | 1377 | WP_119261252.1 | phage tail protein | - |
| D3Z09_RS03650 () | 775066..775593 | - | 528 | WP_119261253.1 | phage tail protein I | - |
| D3Z09_RS03655 () | 775586..776494 | - | 909 | WP_119261254.1 | baseplate assembly protein | - |
| D3Z09_RS03660 () | 776500..776850 | - | 351 | WP_013574050.1 | GPW/gp25 family protein | - |
| D3Z09_RS03665 () | 776847..777488 | - | 642 | WP_013574051.1 | phage baseplate assembly protein V | - |
| D3Z09_RS03670 () | 777570..778031 | - | 462 | WP_013574052.1 | phage tail protein | - |
| D3Z09_RS03675 () | 778124..778552 | - | 429 | WP_037034126.1 | Rz-like lysis system protein LysB | - |
| D3Z09_RS03680 () | 778553..779062 | - | 510 | WP_013574054.1 | lysozyme | - |
| D3Z09_RS03685 () | 779043..779264 | - | 222 | WP_119261255.1 | hypothetical protein | - |
| D3Z09_RS03690 () | 779255..779458 | - | 204 | WP_013574056.1 | tail protein X | - |
| D3Z09_RS03695 () | 779670..779864 | - | 195 | WP_013574057.1 | hypothetical protein | - |
| D3Z09_RS03700 () | 780013..781905 | - | 1893 | WP_119261256.1 | replication endonuclease | - |
| D3Z09_RS03705 () | 781999..782220 | - | 222 | WP_013574059.1 | TraR/DksA C4-type zinc finger protein | - |
| D3Z09_RS03710 () | 782220..782495 | - | 276 | WP_013574060.1 | DUF5347 family protein | - |
| D3Z09_RS03715 () | 782628..783218 | + | 591 | WP_013574061.1 | helix-turn-helix domain-containing protein | - |
| D3Z09_RS03720 () | 783507..784583 | + | 1077 | WP_013574062.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| D3Z09_RS03725 () | 784590..785711 | + | 1122 | WP_119261257.1 | bifunctional chorismate mutase/prephenate dehydrogenase | - |
| D3Z09_RS03730 () | 785789..786943 | - | 1155 | WP_119261258.1 | bifunctional chorismate mutase/prephenate dehydratase | - |
| D3Z09_RS03735 () | 787255..787599 | - | 345 | WP_013574065.1 | ribosome-associated translation inhibitor RaiA | - |
| D3Z09_RS03740 () | 787881..788615 | - | 735 | WP_013574066.1 | outer membrane protein assembly factor BamD | - |
| D3Z09_RS03750 () | 788746..789723 | + | 978 | WP_037034119.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| D3Z09_RS03755 () | 789723..790460 | + | 738 | WP_119261259.1 | polyphenol oxidase | - |
| D3Z09_RS03760 () | 790591..793164 | + | 2574 | WP_119261260.1 | hypothetical protein | VF |
| D3Z09_RS03785 () | 798994..800292 | + | 1299 | WP_119261261.1 | metabolite/H+ symporter | - |
| D3Z09_RS03790 () | 800482..801837 | - | 1356 | WP_153376683.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
| D3Z09_RS03795 () | 801922..804642 | - | 2721 | WP_119261262.1 | bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase | - |
| D3Z09_RS03800 () | 804674..805378 | - | 705 | WP_013574073.1 | DTW domain-containing protein | - |
| D3Z09_RS03805 () | 805508..805927 | - | 420 | WP_013574074.1 | thioredoxin TrxC | - |
| D3Z09_RS03810 () | 806172..807275 | + | 1104 | WP_013574075.1 | tRNA/rRNA methyltransferase | - |
| D3Z09_RS03815 () | 807351..808886 | - | 1536 | WP_015689403.1 | hypothetical protein | VF |
| D3Z09_RS03820 () | 808904..810079 | - | 1176 | WP_119261263.1 | hypothetical protein | VF |
| D3Z09_RS03825 () | 810105..811559 | - | 1455 | WP_119261264.1 | efflux transporter outer membrane subunit | - |
| D3Z09_RS03830 () | 811583..812104 | - | 522 | WP_013574079.1 | hypothetical protein | VF |
| D3Z09_RS03835 () | 812279..812617 | - | 339 | WP_013574080.1 | L-valine transporter subunit YgaH | - |
| D3Z09_RS03840 () | 812607..813368 | - | 762 | WP_013574081.1 | AzlC family ABC transporter permease | - |
| D3Z09_RS03845 () | 813543..814727 | - | 1185 | WP_119261265.1 | MFS transporter | - |
| D3Z09_RS03850 () | 814896..815327 | - | 432 | WP_013574083.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| D3Z09_RS03855 () | 815349..815531 | - | 183 | WP_013574084.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| D3Z09_RS03860 () | 815648..816643 | - | 996 | WP_013574085.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| D3Z09_RS03865 () | 816668..817678 | - | 1011 | WP_112152327.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| D3Z09_RS03870 () | 817784..818908 | - | 1125 | WP_187514584.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| D3Z09_RS03875 () | 818980..820176 | - | 1197 | WP_013574088.1 | hypothetical protein | VF |
| D3Z09_RS03880 () | 820765..821478 | - | 714 | WP_112152328.1 | hypothetical protein | VF |
| D3Z09_RS03885 () | 821471..823123 | - | 1653 | WP_119261267.1 | hypothetical protein | VF |
| D3Z09_RS03890 () | 823443..824798 | + | 1356 | WP_013574091.1 | 2-hydroxycarboxylate transporter family protein | - |
| D3Z09_RS03895 () | 824993..825553 | + | 561 | WP_013574092.1 | hypothetical protein | VF |
| D3Z09_RS03900 () | 825601..826644 | - | 1044 | WP_013574093.1 | L-glyceraldehyde 3-phosphate reductase | - |
| D3Z09_RS03905 () | 826762..827745 | - | 984 | WP_013574094.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| D3Z09_RS03910 () | 827767..829929 | - | 2163 | WP_119261268.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| D3Z09_RS03915 () | 829911..830315 | - | 405 | WP_013574096.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| D3Z09_RS03920 () | 830326..830565 | - | 240 | WP_013574097.1 | glutaredoxin-like protein NrdH | - |
| D3Z09_RS03925 () | 830822..831253 | - | 432 | WP_013574098.1 | carboxymuconolactone decarboxylase family protein | - |
| D3Z09_RS03930 () | 831377..832828 | + | 1452 | WP_015689407.1 | PLP-dependent aminotransferase family protein | - |
| D3Z09_RS25775 () | 832812..832985 | + | 174 | WP_015689408.1 | hypothetical protein | - |
| D3Z09_RS03935 () | 833223..833528 | - | 306 | WP_013574100.1 | YqjD family protein | - |
| D3Z09_RS03940 () | 833801..834997 | + | 1197 | WP_119261269.1 | MFS transporter | - |
| D3Z09_RS03945 () | 835124..835459 | + | 336 | WP_013574102.1 | DUF2002 family protein | - |
| D3Z09_RS03950 () | 835524..836411 | - | 888 | WP_013574103.1 | AraC family transcriptional regulator | - |
| D3Z09_RS03955 () | 836538..836978 | - | 441 | WP_013574104.1 | DUF1198 domain-containing protein | - |
| D3Z09_RS03960 () | 837138..838082 | - | 945 | WP_013574105.1 | 6-phosphofructokinase II | - |
| D3Z09_RS03965 () | 838267..838797 | + | 531 | WP_013574106.1 | class IV adenylate cyclase | - |
| D3Z09_RS03970 () | 838846..839838 | - | 993 | WP_013574107.1 | tRNA-modifying protein YgfZ | - |
| D3Z09_RS03975 () | 840117..840383 | + | 267 | WP_037035260.1 | FAD assembly factor SdhE | Antitoxin Detail |
| D3Z09_RS03980 () | 840364..840816 | + | 453 | WP_013574109.1 | protein YgfX | Toxin Detail |
| D3Z09_RS03985 () | 840862..841380 | - | 519 | WP_013574110.1 | flavodoxin FldB | - |
| D3Z09_RS03990 () | 841480..842439 | + | 960 | WP_013574111.1 | IS91 family transposase ISAzo26 | Transposase |
| D3Z09_RS03995 () | 842465..843184 | + | 720 | WP_013574112.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
| D3Z09_RS04000 () | 843191..844924 | + | 1734 | WP_013574113.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| D3Z09_RS04005 () | 845055..846153 | + | 1099 | WP_013574114.1 | peptide chain release factor 2 | - |
| D3Z09_RS04010 () | 846163..847692 | + | 1530 | WP_013574115.1 | lysine--tRNA ligase | - |
| D3Z09_RS04025 () | 848494..848715 | + | 222 | WP_119261271.1 | helix-turn-helix domain-containing protein | - |
| D3Z09_RS04030 () | 848787..850148 | - | 1362 | WP_015689414.1 | argininosuccinate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|