MGE detailed information
MGE type: Conjugative plasmid MGE length: 101614 bp
Accession: NZ_CP032264 Location: 1..101614 Organism: Escherichia coli strain AR_0089 Replicon: plasmid unnamed2
Accession: NZ_CP032264 Location: 1..101614 Organism: Escherichia coli strain AR_0089 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM468_RS00965 () | 93..1094 | - | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| AM468_RS00970 () | 1446..1700 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| AM468_RS00975 () | 1700..2290 | + | 591 | WP_000194550.1 | hypothetical protein | - |
| AM468_RS00980 () | 2308..2655 | - | 348 | WP_000142436.1 | hypothetical protein | - |
| AM468_RS00985 () | 2774..3121 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| AM468_RS00990 () | 3139..5019 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| AM468_RS00995 () | 5298..5768 | - | 471 | Protein_6 | hypothetical protein | - |
| AM468_RS01000 () | 5820..6137 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| AM468_RS01005 () | 6134..6667 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| AM468_RS01010 () | 6761..7906 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| AM468_RS01015 () | 8230..9492 | - | 1263 | WP_119178235.1 | IS1380 family transposase ISEcp1 | Transposase |
| AM468_RS01020 () | 9675..10559 | - | 885 | Protein_11 | hypothetical protein | - |
| AM468_RS01030 () | 10913..11515 | + | 603 | WP_000517695.1 | hypothetical protein | - |
| AM468_RS01035 () | 11571..12065 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| AM468_RS27360 () | 12065..12331 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| AM468_RS01050 () | 12808..13281 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| AM468_RS01055 () | 13398..14246 | - | 849 | WP_001057992.1 | 3'-5' exonuclease | - |
| AM468_RS01060 () | 14286..14567 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM468_RS01065 () | 14564..14833 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| AM468_RS01080 () | 15742..16773 | - | 1032 | WP_000907873.1 | replication initiation protein | - |
| AM468_RS01095 () | 17746..18009 | + | 264 | WP_001324596.1 | ash family protein | - |
| AM468_RS01100 () | 17927..18214 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| AM468_RS01110 () | 18656..19189 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| AM468_RS01120 () | 19443..20126 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| AM468_RS01125 () | 20140..20706 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| AM468_RS01135 () | 20974..21228 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| AM468_RS01140 () | 21271..21723 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| AM468_RS01150 () | 22397..23464 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| AM468_RS01155 () | 23464..23901 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| AM468_RS01160 () | 23915..25597 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| AM468_RS01165 () | 25590..26885 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| AM468_RS01170 () | 26872..27324 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| AM468_RS01175 () | 27335..28888 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| AM468_RS01180 () | 28901..29998 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| AM468_RS01185 () | 30016..30630 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| AM468_RS01190 () | 30640..31200 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| AM468_RS01195 () | 31185..31841 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| AM468_RS01200 () | 31841..32929 | + | 1089 | Protein_37 | hypothetical protein | VF |
| AM468_RS01215 () | 33978..35132 | + | 1155 | WP_001139958.1 | integrase | - |
| AM468_RS01220 () | 35283..36107 | + | 825 | WP_001238927.1 | hypothetical protein | - |
| AM468_RS01225 () | 36193..37395 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| AM468_RS01230 () | 37455..38039 | + | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| AM468_RS01235 () | 38434..38892 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| AM468_RS01240 () | 38889..39707 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| AM468_RS01245 () | 39704..40852 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| AM468_RS01250 () | 40849..41139 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| AM468_RS01255 () | 41154..41705 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| AM468_RS01260 () | 41795..45562 | + | 3768 | WP_001141535.1 | hypothetical protein | - |
| AM468_RS01265 () | 45580..45927 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| AM468_RS01270 () | 45924..46616 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| AM468_RS01275 () | 46627..47610 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| AM468_RS01280 () | 47613..48902 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| AM468_RS01285 () | 48902..49606 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| AM468_RS01290 () | 49606..50133 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| AM468_RS01295 () | 50184..50588 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| AM468_RS01300 () | 50652..50840 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| AM468_RS01305 () | 50824..51624 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| AM468_RS01310 () | 51714..54758 | + | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| AM468_RS01315 () | 54758..55372 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| AM468_RS01320 () | 55339..56541 | + | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| AM468_RS01325 () | 56570..57154 | + | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| AM468_RS01330 () | 57251..59419 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| AM468_RS01335 () | 59490..60152 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AM468_RS01340 () | 60224..60433 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| AM468_RS27080 () | 60825..61001 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - () | 61487..61538 | + | 52 | NuclAT_1 | - | - |
| - () | 61487..61538 | + | 52 | NuclAT_1 | - | - |
| - () | 61487..61538 | + | 52 | NuclAT_1 | - | - |
| - () | 61487..61538 | + | 52 | NuclAT_1 | - | - |
| AM468_RS01355 () | 61722..62744 | + | 1023 | WP_001572805.1 | IS21 family transposase IS100kyp | Transposase |
| AM468_RS01360 () | 62741..63523 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| AM468_RS01365 () | 63884..64135 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| AM468_RS01370 () | 64207..64359 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 64409..64471 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64409..64471 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64409..64471 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64409..64471 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| AM468_RS01375 () | 64651..65859 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| AM468_RS01380 () | 65878..66948 | + | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| AM468_RS01385 () | 66941..69232 | + | 2292 | WP_001289271.1 | hypothetical protein | - |
| AM468_RS01390 () | 69269..71968 | - | 2700 | WP_001474686.1 | Protein TraI | Relaxase |
| AM468_RS01395 () | 71979..72311 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| AM468_RS01400 () | 72545..72880 | + | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| AM468_RS01405 () | 72966..73814 | - | 849 | WP_032174273.1 | DUF4942 domain-containing protein | - |
| AM468_RS27365 () | 74163..74360 | + | 198 | WP_032174271.1 | hypothetical protein | - |
| AM468_RS01420 () | 74394..74645 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| AM468_RS01425 () | 74676..74894 | - | 219 | WP_000170750.1 | hypothetical protein | VF |
| AM468_RS01430 () | 74959..75636 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| AM468_RS01435 () | 75636..75983 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| AM468_RS01440 () | 76003..77574 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| AM468_RS01445 () | 77664..78566 | - | 903 | WP_000038404.1 | Recombination-promoting nuclease RpnA | VF |
| AM468_RS01450 () | 78631..78897 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| AM468_RS01455 () | 78991..79425 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| AM468_RS01470 () | 80154..80654 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| AM468_RS01480 () | 81101..82276 | - | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| AM468_RS01485 () | 82406..83125 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| AM468_RS01490 () | 83122..83556 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| AM468_RS01495 () | 83611..85569 | - | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| AM468_RS01500 () | 85628..85861 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| AM468_RS01505 () | 85919..86446 | - | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| AM468_RS27370 () | 86815..86883 | + | 69 | Protein_92 | pilus protein | - |
| AM468_RS01515 () | 87216..87407 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| AM468_RS01520 () | 87404..87826 | - | 423 | WP_000271725.1 | DUF1380 family protein | - |
| AM468_RS01525 () | 87873..88175 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| AM468_RS01535 () | 88716..89486 | - | 771 | WP_024133193.1 | hypothetical protein | - |
| AM468_RS01540 () | 89537..89971 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| AM468_RS01545 () | 89983..90204 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| AM468_RS01550 () | 90205..90888 | - | 684 | WP_000086178.1 | DNA methylase | - |
| AM468_RS01555 () | 90965..91276 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| AM468_RS01560 () | 91273..92175 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| AM468_RS01570 () | 92593..92841 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| AM468_RS01575 () | 92838..93275 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM468_RS01580 () | 93275..94549 | + | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| AM468_RS01585 () | 94551..94967 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| AM468_RS01590 () | 94960..95940 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| AM468_RS01595 () | 96354..96662 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| AM468_RS01600 () | 96749..97393 | - | 645 | WP_001144036.1 | ParA family protein | - |
| AM468_RS01605 () | 97573..98379 | - | 807 | WP_000016969.1 | site-specific integrase | - |
| AM468_RS01610 () | 98380..98685 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | - |
| AM468_RS01615 () | 98687..98905 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| AM468_RS01625 () | 99463..100389 | + | 927 | WP_001290416.1 | hypothetical protein | - |
| AM468_RS01630 () | 100434..100688 | + | 255 | WP_000678527.1 | hypothetical protein | - |
| AM468_RS01635 () | 101187..101531 | + | 345 | WP_000793307.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|