MGE detailed information
MGE type: Mobilizable plasmid MGE length: 159756 bp
Accession: NZ_CP032239 Location: 1..159756 Organism: Escherichia coli strain ECCWS199 Replicon: plasmid pTB222
Accession: NZ_CP032239 Location: 1..159756 Organism: Escherichia coli strain ECCWS199 Replicon: plasmid pTB222
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3W53_RS25135 () | 158..862 | + | 705 | WP_032193599.1 | replication initiation protein | - |
| D3W53_RS25145 () | 1752..3188 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| D3W53_RS25155 () | 3455..4159 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| D3W53_RS25160 () | 4213..6522 | + | 2310 | Protein_4 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| D3W53_RS25165 () | 6545..6805 | - | 261 | Protein_5 | PAS domain-containing protein | - |
| D3W53_RS25175 () | 6815..7519 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| D3W53_RS25180 () | 7724..8515 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| D3W53_RS25185 () | 8521..8811 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| D3W53_RS25190 () | 8923..9420 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| D3W53_RS25195 () | 9565..10578 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| D3W53_RS26490 () | 10781..11131 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| D3W53_RS25205 () | 11307..11867 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| D3W53_RS25210 () | 11871..14837 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| D3W53_RS25215 () | 14958..16034 | - | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| D3W53_RS25225 () | 16316..17172 | - | 857 | Protein_15 | IS3 family transposase ISEc14 | Transposase |
| D3W53_RS25230 () | 17377..17793 | - | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| D3W53_RS25235 () | 17790..18020 | - | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| D3W53_RS25245 () | 18219..18710 | - | 492 | Protein_18 | IS5 family transposase ISKpn26 | Transposase |
| D3W53_RS25250 () | 18816..19520 | - | 705 | Protein_19 | IS6 family transposase IS26 | Transposase |
| D3W53_RS26630 () | 19584..19706 | + | 123 | Protein_20 | IS66 family insertion sequence element accessory protein TnpB | - |
| D3W53_RS25260 () | 19798..20579 | - | 782 | Protein_21 | IS21 family transposase IS100kyp | Transposase |
| D3W53_RS25265 () | 20576..21184 | - | 609 | Protein_22 | IS21 family transposase IS100kyp | Transposase |
| D3W53_RS25270 () | 21198..21570 | - | 373 | Protein_23 | IS1 family transposase | - |
| D3W53_RS25275 () | 22080..22790 | + | 711 | WP_119173451.1 | cache domain-containing protein | - |
| D3W53_RS25280 () | 22951..24411 | + | 1461 | WP_119173452.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| D3W53_RS25285 () | 24401..25747 | + | 1347 | WP_158666848.1 | GGDEF domain-containing protein | - |
| D3W53_RS25290 () | 25794..26490 | - | 697 | Protein_27 | IS1 family transposase | - |
| D3W53_RS25300 () | 26571..28676 | + | 2106 | WP_050489276.1 | UDP-forming cellulose synthase catalytic subunit | - |
| D3W53_RS25305 () | 28740..30890 | + | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| D3W53_RS25315 () | 31634..32980 | + | 1347 | WP_059039599.1 | group II intron reverse transcriptase/maturase | - |
| D3W53_RS25325 () | 33167..33550 | + | 384 | WP_141094272.1 | IS200/IS605 family transposase | - |
| D3W53_RS25335 () | 33626..34854 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| D3W53_RS25345 () | 35356..38829 | + | 3474 | WP_104692566.1 | cellulose biosynthesis protein BcsC | - |
| D3W53_RS25355 () | 39029..39606 | + | 578 | Protein_34 | IS1 family transposase | - |
| D3W53_RS25360 () | 39605..40300 | + | 696 | Protein_35 | IS3 family transposase IS2 | Transposase |
| D3W53_RS25365 () | 40308..40448 | + | 141 | Protein_36 | L-threonine dehydrogenase | - |
| D3W53_RS25370 () | 40603..41337 | - | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| D3W53_RS25375 () | 41427..41618 | + | 192 | Protein_38 | PerC family transcriptional regulator | - |
| D3W53_RS25380 () | 41634..42331 | - | 698 | Protein_39 | IS1 family transposase | - |
| D3W53_RS25405 () | 43030..44127 | + | 1098 | WP_072647222.1 | hypothetical protein | - |
| D3W53_RS25410 () | 44200..44706 | + | 507 | WP_032203676.1 | 3'-phosphatase 5'-polynucleotide kinase phage-associated protein | - |
| D3W53_RS25415 () | 44973..48089 | - | 3117 | WP_119173453.1 | HsdR family type I site-specific deoxyribonuclease | - |
| D3W53_RS25420 () | 48211..49479 | - | 1269 | WP_072647224.1 | restriction endonuclease subunit S | - |
| D3W53_RS25425 () | 49476..51032 | - | 1557 | WP_072647227.1 | type I restriction-modification system subunit M | - |
| D3W53_RS25430 () | 51215..51436 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D3W53_RS25435 () | 51436..51816 | + | 381 | WP_072647225.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| D3W53_RS25440 () | 51821..52000 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| D3W53_RS25445 () | 52028..53071 | + | 1044 | WP_072647226.1 | DUF968 domain-containing protein | - |
| D3W53_RS25450 () | 53195..54163 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| D3W53_RS25455 () | 54332..54451 | + | 120 | WP_071527722.1 | ash family protein | - |
| D3W53_RS25460 () | 54470..54691 | + | 222 | WP_001361625.1 | host cell division inhibitor Icd-like protein | - |
| D3W53_RS25465 () | 54688..55803 | + | 1116 | WP_032203728.1 | phage antirepressor KilAC domain-containing protein | - |
| D3W53_RS25470 () | 55836..56687 | - | 852 | WP_000611664.1 | hypothetical protein | - |
| D3W53_RS25475 () | 56798..57007 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| D3W53_RS25490 () | 57178..57875 | + | 698 | Protein_55 | IS1 family transposase | - |
| D3W53_RS25495 () | 58044..59024 | + | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| D3W53_RS25505 () | 59661..59882 | + | 222 | WP_000542338.1 | hypothetical protein | - |
| D3W53_RS25510 () | 59890..60921 | + | 1032 | WP_000067537.1 | site-specific integrase | - |
| D3W53_RS25515 () | 60972..61283 | + | 312 | WP_001224232.1 | hypothetical protein | - |
| D3W53_RS25520 () | 61529..62089 | + | 561 | WP_000848370.1 | Ref family protein | - |
| D3W53_RS25525 () | 62176..62925 | + | 750 | WP_104692568.1 | DUF4145 domain-containing protein | - |
| D3W53_RS25530 () | 63081..63722 | + | 642 | WP_001351995.1 | hypothetical protein | - |
| D3W53_RS25535 () | 63825..64952 | + | 1128 | WP_071447930.1 | RelA/SpoT domain-containing protein | - |
| D3W53_RS25540 () | 64989..65237 | - | 249 | WP_000747845.1 | hypothetical protein | - |
| D3W53_RS25545 () | 65234..65674 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| D3W53_RS25550 () | 65794..66956 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| D3W53_RS26635 () | 66970..67218 | - | 249 | WP_089571553.1 | holin | - |
| D3W53_RS25560 () | 67211..67768 | - | 558 | WP_024175649.1 | lysozyme | - |
| D3W53_RS25565 () | 67938..68426 | + | 489 | WP_000068862.1 | single-stranded DNA-binding protein | - |
| D3W53_RS25570 () | 68660..69772 | - | 1113 | WP_089571554.1 | porin OmpC | - |
| D3W53_RS25575 () | 70439..70750 | - | 312 | WP_001165933.1 | hypothetical protein | - |
| D3W53_RS25580 () | 70740..72017 | - | 1278 | WP_104692586.1 | ddrB domain protein | - |
| D3W53_RS25590 () | 72292..72989 | + | 698 | Protein_73 | IS1 family transposase | - |
| D3W53_RS25595 () | 73463..76978 | + | 3516 | WP_089571546.1 | Outer membrane protein IcsA autotransporter | VF |
| D3W53_RS25600 () | 77153..77358 | - | 206 | Protein_75 | hypothetical protein | - |
| D3W53_RS25605 () | 77348..77548 | + | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| D3W53_RS25610 () | 77838..78125 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D3W53_RS25615 () | 78122..78373 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D3W53_RS25625 () | 78986..81847 | + | 2862 | Protein_79 | helicase | - |
| D3W53_RS25630 () | 81930..83143 | + | 1214 | WP_162895303.1 | IS3 family transposase IS629 | Transposase |
| D3W53_RS25635 () | 83146..83864 | - | 719 | Protein_81 | IS1 family transposase | - |
| D3W53_RS25645 () | 83970..84371 | - | 402 | Protein_82 | IS30 family transposase IS30D | Transposase |
| D3W53_RS25650 () | 84469..86130 | - | 1662 | Protein_83 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| D3W53_RS25655 () | 86120..86527 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| D3W53_RS25660 () | 86665..87549 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| D3W53_RS25665 () | 87581..88780 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| D3W53_RS25670 () | 88886..88960 | + | 75 | Protein_87 | TetR family transcriptional regulator | - |
| D3W53_RS25675 () | 89251..89955 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS26510 () | 89961..90101 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| D3W53_RS25685 () | 90587..91324 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D3W53_RS25690 () | 91321..91545 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| D3W53_RS25695 () | 91756..93249 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| D3W53_RS26640 () | 93718..94164 | + | 447 | Protein_93 | DUF3363 domain-containing protein | - |
| D3W53_RS25705 () | 94381..95595 | + | 1215 | WP_058657119.1 | Bicyclomycin resistance protein | ARG |
| D3W53_RS25710 () | 95623..95928 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| D3W53_RS25715 () | 96040..97533 | + | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| D3W53_RS25725 () | 97769..98011 | - | 243 | Protein_97 | phosphoglucosamine mutase | - |
| D3W53_RS25730 () | 98098..98913 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| D3W53_RS25735 () | 99003..100000 | + | 998 | Protein_99 | IS4 family transposase ISAba1 | Transposase |
| D3W53_RS25745 () | 100113..101321 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| D3W53_RS25765 () | 101628..102107 | - | 480 | WP_119173454.1 | phenol hydroxylase | - |
| D3W53_RS25770 () | 102163..102867 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS25775 () | 102932..103111 | - | 180 | Protein_103 | winged helix-turn-helix domain-containing protein | - |
| D3W53_RS25780 () | 103375..103943 | - | 569 | Protein_104 | IS1 family transposase IS1S | Transposase |
| D3W53_RS25790 () | 104045..104368 | - | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| D3W53_RS25795 () | 104474..105607 | + | 1134 | WP_001089729.1 | permease | - |
| D3W53_RS25800 () | 105735..106139 | - | 405 | Protein_107 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D3W53_RS25805 () | 106307..109294 | + | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| D3W53_RS26515 () | 109331..109471 | - | 141 | WP_020219413.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| D3W53_RS25815 () | 109635..110192 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| D3W53_RS25820 () | 110375..111235 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| D3W53_RS25825 () | 111493..112284 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| D3W53_RS25830 () | 112492..113460 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| D3W53_RS25840 () | 113818..114063 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| D3W53_RS25845 () | 114101..114964 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| D3W53_RS25850 () | 115110..115208 | - | 99 | Protein_116 | macrolide transporter | - |
| D3W53_RS25860 () | 115262..115966 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS25865 () | 116117..116932 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| D3W53_RS25870 () | 117122..117826 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS25880 () | 117935..118276 | - | 342 | WP_072796249.1 | Late promoter-activating protein | - |
| D3W53_RS25885 () | 118294..119955 | - | 1662 | Protein_121 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| D3W53_RS25890 () | 119945..120352 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| D3W53_RS25895 () | 120490..121374 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| D3W53_RS25900 () | 121406..122605 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| D3W53_RS25905 () | 122711..123361 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D3W53_RS25910 () | 123393..123635 | - | 243 | WP_000844627.1 | transposase | - |
| D3W53_RS25915 () | 123693..125207 | - | 1515 | Protein_127 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| D3W53_RS25920 () | 125273..125977 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS25930 () | 126106..126870 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| D3W53_RS25935 () | 126842..127282 | - | 441 | WP_162852153.1 | phage regulatory CII family protein | - |
| D3W53_RS25940 () | 127302..127520 | - | 219 | WP_042881802.1 | hypothetical protein | - |
| D3W53_RS25945 () | 127628..128320 | + | 693 | WP_064145616.1 | hypothetical protein | - |
| D3W53_RS25955 () | 128725..129309 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| D3W53_RS25960 () | 129309..130547 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| D3W53_RS25965 () | 130544..131449 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| D3W53_RS25970 () | 132042..132746 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS25975 () | 133391..134401 | - | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| D3W53_RS25980 () | 135142..136308 | + | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| D3W53_RS25985 () | 136308..137279 | + | 972 | WP_001698877.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| D3W53_RS26000 () | 138503..139711 | + | 1209 | WP_049239040.1 | IS200-IS605 family transposase IS609 | Transposase |
| D3W53_RS26005 () | 139734..139949 | - | 216 | Protein_141 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| D3W53_RS26010 () | 140028..141299 | - | 1272 | WP_097739798.1 | Y-family DNA polymerase | - |
| D3W53_RS26015 () | 141299..141724 | - | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| D3W53_RS26025 () | 142125..142496 | + | 372 | Protein_144 | group II intron reverse transcriptase/maturase | - |
| D3W53_RS26030 () | 142552..143765 | + | 1214 | WP_162895303.1 | IS3 family transposase IS629 | Transposase |
| D3W53_RS26035 () | 143879..144716 | + | 838 | Protein_146 | IS3 family transposase ISEhe3 | Transposase |
| D3W53_RS26040 () | 145113..145810 | + | 698 | Protein_147 | IS1 family transposase | - |
| D3W53_RS26045 () | 145968..146840 | - | 873 | WP_000794337.1 | hypothetical protein | - |
| D3W53_RS26050 () | 147016..147480 | - | 465 | WP_001352013.1 | helix-turn-helix domain-containing protein | - |
| D3W53_RS26055 () | 147623..148320 | - | 698 | Protein_150 | IS1 family transposase IS1X2 | Transposase |
| D3W53_RS26060 () | 148375..149358 | - | 984 | Protein_151 | hypothetical protein | Relaxase |
| D3W53_RS26065 () | 149369..150091 | - | 723 | WP_000133023.1 | hypothetical protein | - |
| D3W53_RS26070 () | 150088..150573 | - | 486 | WP_000071636.1 | hypothetical protein | - |
| D3W53_RS26075 () | 151331..152129 | + | 799 | Protein_154 | trhR | - |
| D3W53_RS26080 () | 152132..152643 | + | 512 | Protein_155 | hypothetical protein | - |
| D3W53_RS26085 () | 153258..153428 | + | 171 | Protein_156 | thioredoxin family protein | - |
| D3W53_RS26090 () | 153465..154673 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| D3W53_RS26100 () | 154818..155642 | + | 825 | Protein_158 | conjugal transfer protein TraF | - |
| D3W53_RS26105 () | 155632..156063 | + | 432 | Protein_159 | IncHI-type conjugal transfer protein TrhH | - |
| D3W53_RS26110 () | 156078..156962 | - | 885 | Protein_160 | IS3 family transposase ISEc52 | Transposase |
| D3W53_RS26120 () | 157027..157782 | + | 756 | Protein_161 | IS30 family transposase IS30D | Transposase |
| D3W53_RS26125 () | 157816..159114 | - | 1299 | Protein_162 | Tn3 family transposase TnpA_Tn3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|