MGE detailed information
MGE type: Conjugative plasmid MGE length: 93870 bp
Accession: NZ_CP032188 Location: 1..93870 Organism: Klebsiella pneumoniae strain AR_0075 Replicon: plasmid unnamed3
Accession: NZ_CP032188 Location: 1..93870 Organism: Klebsiella pneumoniae strain AR_0075 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM454_RS28620 () | 147..413 | - | 267 | WP_032441926.1 | hypothetical protein | VF |
| AM454_RS28625 () | 410..1597 | - | 1188 | WP_032495744.1 | putative protein YggR | VF |
| AM454_RS28630 () | 1575..2393 | - | 819 | WP_015632425.1 | hypothetical protein | VF |
| AM454_RS28635 () | 2390..2857 | - | 468 | WP_015632424.1 | DotD/TraH family lipoprotein | - |
| AM454_RS28640 () | 2880..3359 | - | 480 | WP_015632423.1 | hypothetical protein | VF |
| AM454_RS28645 () | 4057..4368 | - | 312 | WP_015632421.1 | hypothetical protein | - |
| AM454_RS31855 () | 4402..4605 | - | 204 | WP_032495743.1 | hypothetical protein | - |
| AM454_RS28650 () | 4623..5156 | - | 534 | WP_015632420.1 | hypothetical protein | - |
| AM454_RS28655 () | 5424..6002 | + | 579 | WP_015632419.1 | hypothetical protein | - |
| AM454_RS28660 () | 5984..6454 | + | 471 | WP_032441927.1 | hypothetical protein | - |
| AM454_RS28665 () | 6454..6840 | + | 387 | WP_015632417.1 | acyl-CoA thioesterase | - |
| AM454_RS28670 () | 7224..7925 | + | 702 | WP_157948106.1 | RepA protein | - |
| AM454_RS28680 () | 9025..9348 | + | 324 | WP_157833877.1 | hypothetical protein | - |
| AM454_RS28685 () | 9512..10420 | + | 909 | WP_015632416.1 | WYL domain-containing protein | - |
| AM454_RS28690 () | 10435..12165 | + | 1731 | WP_015632415.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| AM454_RS28695 () | 12177..14333 | + | 2157 | Protein_16 | SAM-dependent DNA methyltransferase | - |
| AM454_RS28700 () | 14475..16016 | + | 1542 | Protein_17 | Tn3 family transposase TnpA_IS3000 | Transposase |
| AM454_RS28705 () | 16059..16979 | - | 921 | WP_022631165.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| AM454_RS28710 () | 17092..17667 | - | 576 | WP_001173919.1 | Tn3 family transposase ISPsy42 | Transposase |
| AM454_RS28715 () | 17794..18042 | - | 249 | WP_012585400.1 | type II toxin-antitoxin system YafQ family toxin | - |
| AM454_RS28720 () | 18149..18310 | + | 162 | WP_023277723.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| AM454_RS28730 () | 18485..19498 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| AM454_RS28735 () | 19671..20123 | + | 453 | WP_000237816.1 | hypothetical protein | ARG |
| AM454_RS28740 () | 20204..21457 | - | 1254 | WP_022631163.1 | group II intron reverse transcriptase/maturase | - |
| AM454_RS28745 () | 22178..22732 | + | 555 | WP_022631510.1 | AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase | - |
| AM454_RS28750 () | 22962..23120 | + | 159 | Protein_26 | 16S rRNA (guanine(1405)-N(7))-methyltransferase RmtF | - |
| AM454_RS28755 () | 23143..23922 | + | 780 | WP_015632396.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| AM454_RS28760 () | 23934..24029 | + | 96 | Protein_28 | 16S rRNA (guanine(1405)-N(7))-methyltransferase RmtF | - |
| AM454_RS28765 () | 24028..25311 | + | 1284 | Protein_29 | IS91 family transposase ISVsa3 | Transposase |
| AM454_RS28775 () | 25571..26203 | - | 633 | WP_031281281.1 | Chloramphenicol acetyltransferase | VF |
| AM454_RS28780 () | 26446..27055 | + | 610 | Protein_31 | glutathione S-transferase family protein | - |
| AM454_RS28785 () | 26986..27486 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| AM454_RS31860 () | 27807..27875 | + | 69 | Protein_33 | EAL domain-containing protein | - |
| AM454_RS28795 () | 27993..28757 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| AM454_RS31865 () | 28897..28962 | - | 66 | Protein_35 | EAL domain-containing protein | - |
| AM454_RS28810 () | 29018..30232 | + | 1215 | WP_004098817.1 | type II site-specific deoxyribonuclease | - |
| AM454_RS28815 () | 30266..31669 | - | 1404 | WP_072094655.1 | DNA cytosine methyltransferase | - |
| AM454_RS28820 () | 31798..31983 | + | 186 | Protein_38 | IS1 family transposase | - |
| AM454_RS28830 () | 32018..32722 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM454_RS28835 () | 32792..35587 | - | 2796 | Protein_40 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM454_RS28840 () | 35601..35933 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AM454_RS28845 () | 35980..36855 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| AM454_RS28850 () | 37088..37792 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM454_RS28855 () | 37862..40657 | - | 2796 | Protein_44 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM454_RS28860 () | 40671..41003 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AM454_RS28865 () | 41050..41925 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| AM454_RS28870 () | 42158..42862 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM454_RS28875 () | 42909..43145 | - | 237 | WP_001348075.1 | AAA family ATPase | - |
| AM454_RS28880 () | 43219..43635 | - | 417 | WP_071854281.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AM454_RS28885 () | 43632..43862 | - | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AM454_RS28890 () | 43819..44280 | + | 462 | WP_162899471.1 | hypothetical protein | - |
| AM454_RS28895 () | 44425..44739 | + | 315 | WP_015632378.1 | hypothetical protein | - |
| AM454_RS28900 () | 44788..45099 | + | 312 | WP_024191724.1 | hypothetical protein | - |
| AM454_RS28905 () | 45164..46168 | + | 1005 | WP_016162067.1 | hypothetical protein | - |
| AM454_RS31870 () | 46212..46373 | + | 162 | WP_032495756.1 | hypothetical protein | - |
| AM454_RS28910 () | 46366..47160 | + | 795 | WP_015632375.1 | site-specific integrase | - |
| AM454_RS28915 () | 47632..47811 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| AM454_RS28920 () | 47931..48557 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| AM454_RS28925 () | 49190..50065 | - | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| AM454_RS28930 () | 50477..51748 | - | 1272 | WP_016162068.1 | Y-family DNA polymerase | - |
| AM454_RS28935 () | 51748..52179 | - | 432 | WP_015632467.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM454_RS28940 () | 52343..52828 | - | 486 | Protein_62 | IS5 family transposase | - |
| AM454_RS28945 () | 53123..54148 | - | 1026 | WP_015632466.1 | IS110 family transposase ISAve1 | Transposase |
| AM454_RS28950 () | 54334..54552 | + | 219 | WP_015632465.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AM454_RS28955 () | 54552..54857 | + | 306 | WP_015632464.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AM454_RS28960 () | 55002..55346 | + | 345 | WP_015632463.1 | hypothetical protein | - |
| AM454_RS28965 () | 55388..55954 | + | 567 | WP_015632462.1 | IS1595 family transposase ISNtsp4 | Transposase |
| AM454_RS28970 () | 56158..56415 | - | 258 | WP_016162071.1 | helix-turn-helix domain-containing protein | - |
| AM454_RS28975 () | 56845..57072 | + | 228 | WP_016162072.1 | hypothetical protein | - |
| AM454_RS28980 () | 57086..57208 | + | 123 | Protein_70 | transcriptional regulator | - |
| AM454_RS28985 () | 57414..57857 | - | 444 | WP_015632459.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AM454_RS28990 () | 57883..58065 | - | 183 | WP_015632458.1 | type II toxin-antitoxin system HicA family toxin | - |
| AM454_RS28995 () | 58426..59406 | + | 981 | WP_015632457.1 | partitioning protein | - |
| AM454_RS29000 () | 59399..59827 | + | 429 | WP_015632456.1 | plasmid partitioning/stability family protein | - |
| AM454_RS31880 () | 59980..60438 | + | 459 | WP_015632455.1 | hypothetical protein | - |
| AM454_RS29010 () | 60435..60923 | + | 489 | WP_015632454.1 | transcriptional regulator | - |
| AM454_RS29015 () | 61051..61488 | + | 438 | WP_015632453.1 | hypothetical protein | - |
| AM454_RS29020 () | 62082..62441 | + | 360 | WP_016162075.1 | hypothetical protein | - |
| AM454_RS29025 () | 62585..62764 | + | 180 | WP_032441934.1 | hypothetical protein | - |
| AM454_RS29030 () | 62838..63698 | + | 861 | WP_015632451.1 | DUF4942 domain-containing protein | - |
| AM454_RS29035 () | 63868..64305 | + | 438 | WP_015632450.1 | antirestriction protein | - |
| AM454_RS29040 () | 64997..65230 | + | 234 | WP_016162076.1 | hypothetical protein | - |
| AM454_RS29045 () | 65284..65604 | + | 321 | WP_015632449.1 | hypothetical protein | - |
| AM454_RS29050 () | 65875..66207 | - | 333 | WP_015632448.1 | hypothetical protein | - |
| AM454_RS29055 () | 66603..66914 | + | 312 | WP_016162079.1 | hypothetical protein | - |
| AM454_RS29060 () | 66917..68845 | + | 1929 | WP_015632446.1 | Protein TraI | Relaxase |
| AM454_RS29065 () | 68886..69137 | - | 252 | WP_016162080.1 | hypothetical protein | - |
| AM454_RS29070 () | 69149..69406 | - | 258 | WP_016162081.1 | Phospholipase D | VF |
| AM454_RS29075 () | 69482..69889 | + | 408 | WP_015632445.1 | IS66 family transposase ISCro1 | Transposase |
| AM454_RS29080 () | 69886..70224 | + | 339 | WP_032495749.1 | IS66 family transposase IS682 | Transposase |
| AM454_RS29085 () | 70265..71854 | + | 1590 | WP_015632444.1 | IS66 family transposase ISEcl6 | Transposase |
| AM454_RS29090 () | 71877..72182 | - | 306 | WP_015632443.1 | hypothetical protein | - |
| AM454_RS29095 () | 72228..74420 | - | 2193 | WP_015632442.1 | hypothetical protein | VF |
| AM454_RS29100 () | 74422..75513 | - | 1092 | WP_050484136.1 | thioredoxin fold domain-containing protein | - |
| AM454_RS29105 () | 75524..76942 | - | 1419 | WP_015632440.1 | hypothetical protein | - |
| AM454_RS29110 () | 77044..77667 | - | 624 | WP_015632439.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AM454_RS29115 () | 77733..79877 | - | 2145 | WP_015632438.1 | DotA/TraY family protein | - |
| AM454_RS29120 () | 79919..80500 | - | 582 | WP_015632437.1 | conjugal transfer protein TraX | - |
| AM454_RS29125 () | 80497..81693 | - | 1197 | WP_015632436.1 | conjugal transfer protein TraW | - |
| AM454_RS29130 () | 81704..84751 | - | 3048 | WP_015632435.1 | conjugal transfer protein | - |
| AM454_RS31885 () | 84761..85075 | - | 315 | WP_123677146.1 | hypothetical protein | - |
| AM454_RS29140 () | 85368..85769 | - | 402 | WP_015632433.1 | hypothetical protein | - |
| AM454_RS29145 () | 85823..86356 | - | 534 | WP_015632432.1 | conjugal transfer protein TraQ | - |
| AM454_RS29150 () | 86366..87085 | - | 720 | WP_015632431.1 | conjugal transfer protein TraP | - |
| AM454_RS29155 () | 87091..88431 | - | 1341 | WP_015632430.1 | conjugal transfer protein TraO | - |
| AM454_RS29160 () | 88435..89538 | - | 1104 | WP_015632429.1 | conjugal transfer protein | - |
| AM454_RS29165 () | 89549..90253 | - | 705 | WP_015632428.1 | DotI/IcmL/TraM family protein | - |
| AM454_RS29170 () | 90289..90642 | - | 354 | WP_015632427.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|