MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94204 bp
Accession: NZ_CP032086 Location: 1..94204 Organism: Escherichia coli strain ATCC 25922 Replicon: plasmid pL25922_3
Accession: NZ_CP032086 Location: 1..94204 Organism: Escherichia coli strain ATCC 25922 Replicon: plasmid pL25922_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1792_RS24605 () | 135..1499 | - | 1365 | Protein_0 | ParB N-terminal domain-containing protein | - |
| D1792_RS24610 () | 1499..2122 | - | 624 | WP_000160645.1 | ParB/Srx family N-terminal domain-containing protein | - |
| D1792_RS24615 () | 2359..2769 | - | 411 | WP_000412080.1 | hypothetical protein | - |
| D1792_RS24620 () | 3158..3457 | - | 300 | WP_001141358.1 | hypothetical protein | - |
| D1792_RS24625 () | 3532..3729 | - | 198 | WP_001222808.1 | hypothetical protein | - |
| D1792_RS24630 () | 3729..3998 | - | 270 | WP_000867916.1 | hypothetical protein | - |
| D1792_RS24635 () | 4111..4697 | - | 587 | Protein_6 | S-adenosylmethionine-binding protein | - |
| D1792_RS24645 () | 5373..5651 | - | 279 | WP_000147212.1 | hypothetical protein | - |
| D1792_RS24650 () | 5671..6192 | - | 522 | Protein_8 | glycoside hydrolase family 108 protein | - |
| D1792_RS24655 () | 6176..6472 | - | 297 | WP_000254764.1 | phage holin family protein | - |
| D1792_RS24660 () | 6459..6854 | - | 396 | WP_001271967.1 | phage holin family protein | - |
| D1792_RS24665 () | 7233..7945 | - | 713 | Protein_11 | ead/Ea22-like family protein | - |
| D1792_RS24670 () | 7942..8579 | - | 638 | Protein_12 | hypothetical protein | - |
| D1792_RS24675 () | 8829..9191 | - | 363 | WP_207599255.1 | hypothetical protein | - |
| D1792_RS24680 () | 9544..10609 | - | 1066 | Protein_14 | DUF3560 domain-containing protein | - |
| D1792_RS24685 () | 10779..11156 | - | 378 | WP_001250512.1 | hypothetical protein | - |
| D1792_RS24690 () | 11160..11492 | - | 333 | WP_001270824.1 | DUF1064 domain-containing protein | - |
| D1792_RS24695 () | 11489..11893 | - | 405 | WP_001014473.1 | hypothetical protein | - |
| D1792_RS24700 () | 11893..12126 | - | 234 | WP_000017467.1 | hypothetical protein | - |
| D1792_RS24705 () | 12123..12638 | - | 516 | WP_000972942.1 | hypothetical protein | - |
| D1792_RS24710 () | 12635..13129 | - | 495 | WP_000143879.1 | hypothetical protein | - |
| D1792_RS24715 () | 13303..13965 | + | 663 | WP_000839974.1 | helix-turn-helix domain-containing protein | - |
| D1792_RS24720 () | 14058..14432 | + | 375 | WP_000418975.1 | hypothetical protein | - |
| D1792_RS24725 () | 14583..15236 | + | 654 | WP_000156167.1 | ParA family protein | - |
| D1792_RS24730 () | 15280..15528 | + | 249 | WP_000730007.1 | hypothetical protein | - |
| D1792_RS24735 () | 16300..16872 | - | 573 | WP_000137931.1 | helix-turn-helix transcriptional regulator | - |
| D1792_RS24740 () | 17446..17637 | + | 192 | WP_000183352.1 | hypothetical protein | - |
| D1792_RS24745 () | 17634..18776 | + | 1143 | WP_000854799.1 | ORF6N domain-containing protein | - |
| D1792_RS24750 () | 18787..18975 | - | 189 | WP_000986262.1 | hypothetical protein | - |
| D1792_RS24755 () | 19585..19857 | - | 273 | WP_000148349.1 | helix-turn-helix domain-containing protein | - |
| D1792_RS24760 () | 19921..20301 | - | 381 | WP_000061764.1 | hypothetical protein | - |
| D1792_RS24765 () | 20465..20764 | - | 300 | WP_001259436.1 | XRE family transcriptional regulator | Antitoxin Detail |
| D1792_RS24770 () | 20764..21111 | - | 348 | WP_000269913.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D1792_RS24775 () | 21356..21619 | - | 264 | WP_000424604.1 | hypothetical protein | - |
| D1792_RS24780 () | 21643..21930 | - | 288 | WP_000356589.1 | hypothetical protein | - |
| D1792_RS24785 () | 22574..23410 | - | 837 | WP_001139598.1 | hypothetical protein | - |
| D1792_RS24790 () | 23736..24290 | - | 555 | WP_001199265.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| D1792_RS24795 () | 24456..25382 | + | 927 | Protein_37 | phage tail protein | - |
| D1792_RS24800 () | 25384..25911 | + | 528 | WP_000972103.1 | tail fiber assembly protein | - |
| D1792_RS24805 () | 25940..26473 | - | 534 | WP_000972173.1 | tail fiber assembly protein | - |
| D1792_RS24810 () | 26476..28353 | - | 1878 | Protein_40 | tail fiber protein | - |
| D1792_RS24815 () | 28915..29496 | - | 582 | WP_000763348.1 | phage tail protein I | - |
| D1792_RS24820 () | 29489..30613 | - | 1125 | WP_000174657.1 | baseplate J/gp47 family protein | - |
| D1792_RS24825 () | 30610..30930 | - | 321 | WP_016265986.1 | hypothetical protein | - |
| D1792_RS24830 () | 30927..31394 | - | 468 | WP_000635200.1 | phage tail protein | - |
| D1792_RS24835 () | 31391..32011 | - | 621 | WP_000998643.1 | phage baseplate assembly protein V | - |
| D1792_RS24840 () | 32014..33015 | - | 1002 | WP_000944895.1 | hypothetical protein | - |
| D1792_RS24845 () | 33216..36008 | - | 2793 | WP_000157872.1 | phage tail tape measure protein | - |
| D1792_RS24850 () | 36163..36444 | - | 282 | WP_000450805.1 | phage tail assembly protein | - |
| D1792_RS24855 () | 36454..36975 | - | 522 | WP_000070729.1 | phage major tail tube protein | - |
| D1792_RS24860 () | 36992..38455 | - | 1464 | WP_000542268.1 | phage tail protein | - |
| D1792_RS24865 () | 38455..38745 | - | 291 | WP_001284547.1 | hypothetical protein | - |
| D1792_RS24870 () | 38746..39231 | - | 486 | WP_000609135.1 | hypothetical protein | - |
| D1792_RS24875 () | 39228..39572 | - | 345 | WP_001083981.1 | hypothetical protein | - |
| D1792_RS24880 () | 39572..39964 | - | 393 | WP_000113177.1 | hypothetical protein | - |
| D1792_RS24885 () | 39965..41008 | - | 1044 | WP_001132883.1 | major capsid protein | - |
| D1792_RS24890 () | 41029..41412 | - | 384 | WP_001209256.1 | hypothetical protein | - |
| D1792_RS24895 () | 41422..42486 | - | 1065 | WP_001134427.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| D1792_RS24900 () | 42479..44053 | - | 1575 | WP_001022885.1 | phage portal protein | - |
| D1792_RS24905 () | 44050..44289 | - | 240 | WP_001058287.1 | hypothetical protein | - |
| D1792_RS24910 () | 44301..46157 | - | 1857 | WP_000504844.1 | phage terminase large subunit family protein | - |
| D1792_RS24915 () | 46163..46714 | - | 552 | WP_001019010.1 | hypothetical protein | - |
| D1792_RS24920 () | 46714..47304 | - | 591 | WP_001185429.1 | ParB/Srx family N-terminal domain-containing protein | - |
| D1792_RS24925 () | 47862..48557 | - | 696 | WP_032196544.1 | hypothetical protein | - |
| D1792_RS24930 () | 48598..49971 | - | 1374 | WP_001443071.1 | ParB N-terminal domain-containing protein | - |
| D1792_RS24935 () | 49971..50594 | - | 624 | WP_000160645.1 | ParB/Srx family N-terminal domain-containing protein | - |
| D1792_RS24940 () | 50829..51239 | - | 411 | WP_000412080.1 | hypothetical protein | - |
| D1792_RS24945 () | 51287..51439 | - | 153 | WP_001013684.1 | hypothetical protein | - |
| D1792_RS24950 () | 51626..51925 | - | 300 | WP_001141358.1 | hypothetical protein | - |
| D1792_RS24955 () | 52000..52197 | - | 198 | WP_001222808.1 | hypothetical protein | - |
| D1792_RS24960 () | 52197..52466 | - | 270 | WP_000867916.1 | hypothetical protein | - |
| D1792_RS24965 () | 52578..53165 | - | 588 | WP_000387271.1 | hypothetical protein | - |
| D1792_RS24975 () | 53843..54121 | - | 279 | WP_000147212.1 | hypothetical protein | - |
| D1792_RS24980 () | 54118..54663 | - | 546 | WP_024179329.1 | glycoside hydrolase family 108 protein | - |
| D1792_RS24985 () | 54647..54943 | - | 297 | WP_000254764.1 | phage holin family protein | - |
| D1792_RS24990 () | 54930..55325 | - | 396 | WP_001271967.1 | phage holin family protein | - |
| D1792_RS24995 () | 55704..56417 | - | 714 | WP_000151167.1 | ead/Ea22-like family protein | - |
| D1792_RS25000 () | 56414..57058 | - | 645 | WP_001065193.1 | hypothetical protein | - |
| D1792_RS25005 () | 57308..57673 | - | 366 | WP_000023818.1 | hypothetical protein | - |
| D1792_RS25010 () | 57670..57951 | - | 282 | WP_000823235.1 | hypothetical protein | - |
| D1792_RS25015 () | 58029..59096 | - | 1068 | WP_001041904.1 | DUF3560 domain-containing protein | - |
| D1792_RS25020 () | 59266..59643 | - | 378 | WP_001250512.1 | hypothetical protein | - |
| D1792_RS25025 () | 59647..59979 | - | 333 | WP_001270824.1 | DUF1064 domain-containing protein | - |
| D1792_RS25030 () | 59976..60380 | - | 405 | WP_001014473.1 | hypothetical protein | - |
| D1792_RS25035 () | 60380..60613 | - | 234 | WP_000017467.1 | hypothetical protein | - |
| D1792_RS25040 () | 60610..61125 | - | 516 | WP_000972942.1 | hypothetical protein | - |
| D1792_RS25045 () | 61122..61616 | - | 495 | WP_000143879.1 | hypothetical protein | - |
| D1792_RS25050 () | 61790..62452 | + | 663 | WP_000839974.1 | helix-turn-helix domain-containing protein | - |
| D1792_RS25055 () | 62545..62919 | + | 375 | WP_000418975.1 | hypothetical protein | - |
| D1792_RS25060 () | 63070..63723 | + | 654 | WP_000156167.1 | ParA family protein | - |
| D1792_RS25065 () | 63767..64015 | + | 249 | WP_000730007.1 | hypothetical protein | - |
| D1792_RS25070 () | 64787..65359 | - | 573 | WP_000137931.1 | helix-turn-helix transcriptional regulator | - |
| D1792_RS25075 () | 65933..66124 | + | 192 | WP_000183352.1 | hypothetical protein | - |
| D1792_RS25080 () | 66121..67263 | + | 1143 | WP_000854799.1 | ORF6N domain-containing protein | - |
| D1792_RS25085 () | 67274..67462 | - | 189 | WP_000986262.1 | hypothetical protein | - |
| D1792_RS25090 () | 68073..68345 | - | 273 | WP_000148349.1 | helix-turn-helix domain-containing protein | - |
| D1792_RS25095 () | 68409..68789 | - | 381 | WP_000061764.1 | hypothetical protein | - |
| D1792_RS25100 () | 68953..69252 | - | 300 | WP_001259436.1 | XRE family transcriptional regulator | Antitoxin Detail |
| D1792_RS25105 () | 69252..69599 | - | 348 | WP_000269913.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D1792_RS25110 () | 69844..70107 | - | 264 | WP_000424604.1 | hypothetical protein | - |
| D1792_RS25115 () | 70131..70418 | - | 288 | WP_000356589.1 | hypothetical protein | - |
| D1792_RS25120 () | 71062..71898 | - | 837 | WP_001139598.1 | hypothetical protein | - |
| D1792_RS25125 () | 72224..72778 | - | 555 | WP_001199265.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| D1792_RS25130 () | 72842..73807 | + | 966 | WP_136858490.1 | phage tail protein | - |
| D1792_RS25135 () | 73810..74343 | + | 534 | WP_000972173.1 | tail fiber assembly protein | - |
| D1792_RS25140 () | 74372..74899 | - | 528 | WP_000972103.1 | tail fiber assembly protein | - |
| D1792_RS25145 () | 74901..77351 | - | 2451 | WP_145772481.1 | tail fiber protein | - |
| D1792_RS25150 () | 77403..77984 | - | 582 | WP_000763348.1 | phage tail protein I | - |
| D1792_RS25155 () | 77977..79101 | - | 1125 | WP_000174657.1 | baseplate J/gp47 family protein | - |
| D1792_RS25160 () | 79098..79418 | - | 321 | WP_016265986.1 | hypothetical protein | - |
| D1792_RS25165 () | 79415..79882 | - | 468 | WP_000635200.1 | phage tail protein | - |
| D1792_RS25170 () | 79879..80499 | - | 621 | WP_000998643.1 | phage baseplate assembly protein V | - |
| D1792_RS25175 () | 80502..81503 | - | 1002 | WP_000944895.1 | hypothetical protein | - |
| D1792_RS25180 () | 81704..84496 | - | 2793 | WP_000157872.1 | phage tail tape measure protein | - |
| D1792_RS25185 () | 84651..84932 | - | 282 | WP_000450805.1 | phage tail assembly protein | - |
| D1792_RS25190 () | 84942..85463 | - | 522 | WP_000070729.1 | phage major tail tube protein | - |
| D1792_RS25195 () | 85480..86943 | - | 1464 | WP_000542268.1 | phage tail protein | - |
| D1792_RS25200 () | 86943..87233 | - | 291 | WP_001284547.1 | hypothetical protein | - |
| D1792_RS25205 () | 87234..87719 | - | 486 | WP_000609135.1 | hypothetical protein | - |
| D1792_RS25210 () | 87716..88060 | - | 345 | WP_001083981.1 | hypothetical protein | - |
| D1792_RS25215 () | 88060..88451 | - | 392 | Protein_120 | hypothetical protein | - |
| D1792_RS25220 () | 88452..89462 | - | 1011 | WP_207599257.1 | major capsid protein | - |
| D1792_RS25225 () | 89515..89898 | - | 384 | WP_001209256.1 | hypothetical protein | - |
| D1792_RS25230 () | 89908..90971 | - | 1064 | Protein_123 | ATP-dependent Clp protease proteolytic subunit | VF |
| D1792_RS25235 () | 90964..92535 | - | 1572 | Protein_124 | phage portal protein | - |
| D1792_RS25240 () | 92532..92771 | - | 240 | Protein_125 | hypothetical protein | - |
| D1792_RS25245 () | 92783..94204 | - | 1422 | Protein_126 | phage terminase large subunit family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|