MGE detailed information
MGE type: Genomic_island MGE length: 8641 bp
Accession: NZ_CP032073 Location: 4118414..4127054 Organism: Escherichia coli strain CT29 Replicon: chromosome
Accession: NZ_CP032073 Location: 4118414..4127054 Organism: Escherichia coli strain CT29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2194_RS19885 (4114292) | 4114292..4114630 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| D2194_RS19890 (4114606) | 4114606..4116303 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| D2194_RS19895 (4116340) | 4116340..4116915 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| D2194_RS19905 (4117714) | 4117714..4119241 | + | 1528 | Protein_3934 | lysine decarboxylation/transport transcriptional activator CadC | - |
| D2194_RS19910 (4119607) | 4119607..4120941 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| D2194_RS19915 (4121021) | 4121021..4123168 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| D2194_RS19920 (4123227) | 4123227..4124684 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| D2194_RS19925 (4124921) | 4124921..4126438 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| D2194_RS19930 (4126557) | 4126557..4126730 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| D2194_RS19935 (4126758) | 4126758..4127054 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| D2194_RS19940 (4127281) | 4127281..4127553 | - | 273 | WP_096991230.1 | GNAT family N-acetyltransferase | - |
| D2194_RS19945 (4127565) | 4127565..4127795 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| D2194_RS19950 (4127976) | 4127976..4129607 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| D2194_RS19955 (4129604) | 4129604..4130323 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.005 |