NZ_CP0315491..189020

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 189020 bp
Accession: NZ_CP031549        Location: 1..189020         Organism: Escherichia coli strain cq9       Replicon: plasmid unnamed3


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DS732_RS29770 () 45..1244 - 1200 WP_032153701.1 Tetracycline resistance protein, class C ARG
DS732_RS29775 () 1350..2000 + 651 WP_001493764.1 tetracycline resistance transcriptional repressor TetR(A) -
DS732_RS29780 () 2032..2274 - 243 WP_000844627.1 transposase -
DS732_RS29790 () 2580..3416 - 837 WP_000480968.1 hypothetical protein ARG
DS732_RS29795 () 3416..4219 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
DS732_RS29800 () 4280..5095 - 816 WP_001043260.1 Dihydropteroate synthase ARG
DS732_RS29810 () 5402..5713 + 312 WP_000338945.1 hypothetical protein -
DS732_RS29815 () 5887..6672 + 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
DS732_RS29820 () 6676..7857 + 1182 WP_001207227.1 ParB/RepB/Spo0J family partition protein -
DS732_RS29825 () 7906..8178 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
DS732_RS29830 () 8231..8866 - 636 WP_000074431.1 N-6 DNA methylase -
DS732_RS31815 () 8958..9101 - 144 WP_000939033.1 hypothetical protein -
DS732_RS29835 () 9420..9797 + 378 WP_001125905.1 hypothetical protein -
DS732_RS32020 () 9790..10071 + 282 WP_000044824.1 hypothetical protein -
DS732_RS29845 () 10046..10720 + 675 WP_000344151.1 thymidylate kinase -
DS732_RS29850 () 10788..11219 + 432 WP_005507681.1 hypothetical protein -
DS732_RS29855 () 11225..11536 + 312 WP_002210541.1 hypothetical protein -
DS732_RS29860 () 11545..12045 + 501 WP_000647189.1 hypothetical protein -
DS732_RS29865 () 12049..13476 + 1428 WP_000936896.1 DNA cytosine methyltransferase -
DS732_RS29870 () 13476..14132 + 657 WP_000268551.1 hypothetical protein -
DS732_RS29875 () 14338..14556 + 219 WP_000362482.1 hypothetical protein -
DS732_RS29880 () 14650..15267 + 618 WP_000464631.1 hypothetical protein -
DS732_RS29890 () 15479..15778 + 300 WP_000542259.1 hypothetical protein -
DS732_RS29895 () 15870..16358 - 489 WP_000468105.1 hypothetical protein -
DS732_RS29900 () 16373..18565 - 2193 WP_000366822.1 DNA topoisomerase 3 -
DS732_RS29905 () 18565..18798 - 234 WP_001191892.1 hypothetical protein -
DS732_RS29910 () 18780..19397 - 618 WP_001249396.1 hypothetical protein -
DS732_RS29915 () 19565..22537 + 2973 WP_064986968.1 hypothetical protein Relaxase
DS732_RS29920 () 22534..24399 + 1866 WP_000178857.1 conjugative transfer system coupling protein TraD -
DS732_RS29925 () 24410..24994 + 585 WP_000332868.1 hypothetical protein -
DS732_RS29930 () 24951..25580 + 630 WP_000743449.1 DUF4400 domain-containing protein -
DS732_RS29935 () 25590..26036 + 447 WP_000122507.1 hypothetical protein -
DS732_RS29940 () 26046..26423 + 378 WP_000869297.1 hypothetical protein -
DS732_RS29945 () 26423..27085 + 663 WP_001231464.1 hypothetical protein -
DS732_RS31830 () 27266..27409 + 144 WP_001275801.1 hypothetical protein -
DS732_RS29950 () 27409..27786 + 378 WP_001326174.1 hypothetical protein -
DS732_RS29955 () 27931..28212 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
DS732_RS29960 () 28209..28835 + 627 WP_001049717.1 hypothetical protein -
DS732_RS29965 () 28819..29736 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
DS732_RS29970 () 29736..31049 + 1314 WP_024131605.1 conjugal transfer protein TraB -
DS732_RS29975 () 31046..31624 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
DS732_RS29980 () 31628..32020 + 393 WP_064986969.1 conjugal transfer protein TraA -
DS732_RS29985 () 32305..33567 + 1263 WP_116794658.1 IS1380 family transposase ISEcp1 Transposase
DS732_RS29990 () 33891..35036 + 1146 WP_000976514.1 Beta-lactamase ARG
DS732_RS29995 () 35130..35663 + 534 WP_001221666.1 lipocalin family protein -
DS732_RS30000 () 35660..35977 - 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
DS732_RS30010 () 36705..42191 + 5487 WP_000606835.1 DUF4165 domain-containing protein -
DS732_RS30015 () 42340..43047 + 708 WP_001259346.1 DsbC family protein -
DS732_RS30020 () 43044..45491 + 2448 WP_000637384.1 type IV secretion system protein TraC -
DS732_RS30025 () 45506..45823 + 318 WP_000351984.1 hypothetical protein -
DS732_RS30030 () 45820..46350 + 531 WP_001010740.1 S26 family signal peptidase -
DS732_RS30035 () 46313..47578 + 1266 WP_001447719.1 conjugal transfer protein TraW -
DS732_RS30040 () 47575..48246 + 672 WP_000575345.1 EAL domain-containing protein -
DS732_RS30045 () 48243..49250 + 1008 WP_000983282.1 TraU family protein -
DS732_RS30050 () 49354..52161 + 2808 WP_001447718.1 conjugal transfer mating pair stabilization protein TraN -
DS732_RS30055 () 52200..53060 - 861 WP_000709517.1 hypothetical protein -
DS732_RS30060 () 53183..53824 - 642 WP_000796664.1 hypothetical protein -
DS732_RS30065 () 54119..54439 + 321 WP_000547566.1 hypothetical protein -
DS732_RS30070 () 54743..54928 + 186 WP_001186917.1 hypothetical protein -
DS732_RS30075 () 55148..56116 + 969 WP_000085160.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
DS732_RS30080 () 56127..57035 + 909 WP_000739139.1 hypothetical protein -
DS732_RS30085 () 57096..57626 + 531 WP_000987165.1 single-stranded DNA-binding protein -
DS732_RS30090 () 57721..58710 + 990 WP_001282585.1 phage recombination protein Bet -
DS732_RS30095 () 58773..59783 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
DS732_RS30105 () 59983..61260 + 1278 WP_000170087.1 DUF3150 domain-containing protein -
DS732_RS30110 () 61345..63141 + 1797 WP_000039319.1 VWA domain-containing protein -
DS732_RS30115 () 63203..63538 + 336 WP_001447572.1 hypothetical protein -
DS732_RS30120 () 63803..64342 + 540 WP_000018872.1 hypothetical protein -
DS732_RS30125 () 64433..64933 + 501 WP_000793769.1 hypothetical protein -
DS732_RS30130 () 65007..65891 + 885 WP_000477209.1 hypothetical protein -
DS732_RS30135 () 65957..66181 + 225 WP_001102700.1 2Fe-2S ferredoxin-like protein -
DS732_RS30140 () 66243..66632 + 390 WP_000026577.1 hypothetical protein -
DS732_RS30145 () 66622..67074 + 453 WP_001176699.1 hypothetical protein -
DS732_RS31835 () 67152..67394 - 243 WP_002210529.1 hypothetical protein -
DS732_RS30155 () 67412..67603 + 192 WP_000651508.1 hypothetical protein -
DS732_RS30160 () 67648..68025 + 378 WP_001337696.1 hypothetical protein -
DS732_RS30165 () 68217..68561 + 345 WP_000209093.1 hypothetical protein -
DS732_RS30170 () 68639..68941 + 303 WP_000410925.1 hypothetical protein -
DS732_RS30175 () 69019..70644 + 1626 WP_064986925.1 DNA cytosine methyltransferase -
DS732_RS30180 () 70705..71136 + 432 WP_000687894.1 hypothetical protein -
DS732_RS30185 () 71210..71764 + 555 WP_001093867.1 hypothetical protein -
DS732_RS30190 () 71997..72383 + 387 WP_000042274.1 hypothetical protein -
DS732_RS30195 () 72471..74924 + 2454 WP_001187969.1 phosphoadenosine phosphosulfate reductase -
DS732_RS30200 () 75126..75329 + 204 WP_000050847.1 hypothetical protein -
DS732_RS30205 () 75401..76006 + 606 WP_000071870.1 5'-deoxynucleotidase -
DS732_RS30210 () 75999..76268 + 270 WP_000184110.1 hypothetical protein -
DS732_RS30215 () 76282..76500 + 219 WP_000260293.1 hypothetical protein -
DS732_RS30220 () 76574..77131 + 558 WP_000064432.1 hypothetical protein -
DS732_RS30225 () 77206..78057 + 852 WP_000595210.1 hypothetical protein -
DS732_RS30230 () 78516..78902 + 387 WP_001077336.1 hypothetical protein -
DS732_RS30235 () 79080..80807 + 1728 WP_000122922.1 toprim domain-containing protein -
DS732_RS30240 () 80794..81072 + 279 WP_000268337.1 hypothetical protein -
DS732_RS30245 () 81145..81366 + 222 WP_000714163.1 hypothetical protein -
DS732_RS30250 () 81548..82552 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
DS732_RS30255 () 82631..85605 - 2975 Protein_95 Tn3 family transposase TnpA_TnAs3 Transposase
DS732_RS30260 () 85608..86078 - 471 WP_205418987.1 Tn3 family transposase TnpR_TnAs2 Transposase
DS732_RS30270 () 86474..87490 - 1017 Protein_97 class 1 integron integrase IntI1 -
DS732_RS30275 () 87635..88133 + 499 Protein_98 Dihydrofolate reductase ARG
DS732_RS30280 () 88245..88535 + 291 WP_001336345.1 DUF1010 domain-containing protein -
DS732_RS30285 () 88541..89332 + 792 WP_001206356.1 Streptomycin 3''-adenylyltransferase ARG
DS732_RS30290 () 89594..90853 + 1260 WP_000095725.1 Bicyclomycin resistance protein ARG
DS732_RS30295 () 90946..91737 + 792 WP_001206316.1 Streptomycin 3''-adenylyltransferase ARG
DS732_RS30300 () 91907..92239 + 333 WP_000800531.1 quaternary ammonium compound efflux SMR transporter QacL -
DS732_RS30310 () 92504..93139 - 636 Protein_104 IS256 family transposase IS406 Transposase
DS732_RS31845 () 93141..93416 + 276 WP_109023896.1 hypothetical protein -
DS732_RS30315 () 93419..94210 - 792 WP_000034420.1 Dihydropteroate synthase ARG
DS732_RS30325 () 94680..94925 - 246 WP_001354008.1 GrpB family protein -
DS732_RS30330 () 94963..95826 - 864 WP_000612791.1 SDR family oxidoreductase -
DS732_RS30335 () 96057..96765 - 709 Protein_109 IS6 family transposase IS15DI Transposase
DS732_RS30340 () 96916..97731 + 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
DS732_RS30345 () 97921..98625 - 705 WP_001067834.1 IS6 family transposase IS26 Transposase
DS732_RS30350 () 98690..99941 - 1252 Protein_112 IS3 family transposase ISNoc1 Transposase
DS732_RS30360 () 100016..100684 - 669 WP_001300294.1 putative signaling protein VF
DS732_RS30365 () 100720..100956 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
DS732_RS30370 () 100953..101315 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
DS732_RS30375 () 101333..103027 - 1695 WP_000105636.1 mercury(II) reductase -
DS732_RS30380 () 103079..103501 - 423 WP_001340589.1 organomercurial transporter MerC -
DS732_RS30385 () 103537..103812 - 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
DS732_RS30390 () 103826..104176 - 351 WP_001294663.1 mercuric transport protein MerT -
DS732_RS30395 () 104248..104682 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
DS732_RS30400 () 104729..105433 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
DS732_RS30405 () 105480..105752 - 273 WP_061602529.1 hypothetical protein -
DS732_RS30415 () 106048..106278 + 231 WP_001261287.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
DS732_RS30420 () 106275..106691 + 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
DS732_RS30425 () 106853..108991 - 2139 WP_000350638.1 AAA family ATPase -
DS732_RS30430 () 109345..109602 + 258 WP_000343085.1 hypothetical protein -
DS732_RS30435 () 109602..110192 + 591 WP_000194575.1 hypothetical protein -
DS732_RS30440 () 110455..112011 + 1557 WP_000818556.1 AAA family ATPase -
DS732_RS30445 () 112203..112820 + 618 WP_000521603.1 hypothetical protein -
DS732_RS30450 () 113113..114246 - 1134 WP_058650130.1 permease -
DS732_RS30455 () 114352..114675 + 324 WP_001175593.1 helix-turn-helix domain-containing protein -
DS732_RS30460 () 114776..115486 + 711 WP_057102336.1 arsenical resistance protein ArsH -
DS732_RS30465 () 115562..117871 - 2310 Protein_133 Tn3 family transposase TnpA_ISRsp12 Transposase
DS732_RS30470 () 117925..118629 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
DS732_RS30475 () 118666..119007 - 342 WP_064987020.1 hypothetical protein -
DS732_RS32025 () 119522..119692 - 171 WP_170852050.1 rRNA adenine methyltransferase -
DS732_RS30485 () 119637..120374 - 738 WP_013362818.1 rRNA adenine N-6-methyltransferase ARG
DS732_RS30490 () 120500..120595 - 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
DS732_RS30495 () 120730..121434 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
DS732_RS30505 () 121556..122461 + 906 WP_000219391.1 hypothetical protein ARG
DS732_RS30510 () 122458..123696 + 1239 WP_064986949.1 MFS transporter -
DS732_RS30515 () 123696..124280 + 585 WP_001137892.1 TetR family transcriptional regulator -
DS732_RS30530 () 124773..125537 - 765 WP_064986950.1 IS6 family transposase IS6100 Transposase
DS732_RS30540 () 125764..126069 - 306 WP_000130000.1 hypothetical protein Relaxase
DS732_RS30545 () 126080..127276 - 1197 WP_064986956.1 chromate efflux transporter -
DS732_RS30550 () 127504..128508 + 1005 WP_000427623.1 IS110 family transposase IS4321R Transposase
DS732_RS30555 () 128785..128904 + 120 Protein_147 permease -
DS732_RS31850 () 128914..129030 + 117 WP_000338626.1 hypothetical protein -
DS732_RS30560 () 129151..129525 + 375 WP_000868820.1 hypothetical protein -
DS732_RS30565 () 129639..130364 + 726 WP_000988731.1 hypothetical protein -
DS732_RS30575 () 130497..134750 + 4254 WP_001257735.1 RHS repeat protein -
DS732_RS30580 () 134722..135162 + 441 WP_001326394.1 hypothetical protein -
DS732_RS30585 () 135333..135785 + 453 Protein_153 hypothetical protein -
DS732_RS30590 () 135801..136403 - 603 WP_000278322.1 hypothetical protein -
DS732_RS30595 () 136673..136954 + 282 WP_000575657.1 hypothetical protein -
DS732_RS30605 () 137253..137789 + 537 WP_000949433.1 hypothetical protein -
DS732_RS30610 () 137792..138802 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
DS732_RS30615 () 138807..139676 + 870 WP_000997323.1 3'-5' exonuclease -
DS732_RS30620 () 139673..140164 + 492 WP_000139717.1 hypothetical protein -
DS732_RS30625 () 140491..141366 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
DS732_RS30630 () 141519..142559 + 1041 WP_000101568.1 DNA-binding protein -
DS732_RS30640 () 142846..144357 + 1512 WP_000811656.1 ATP-dependent helicase -
DS732_RS30645 () 144468..145508 + 1041 WP_001326396.1 conjugal transfer protein TraF -
DS732_RS30650 () 145510..146943 + 1434 WP_000256129.1 conjugal transfer protein TraH -
DS732_RS30655 () 146956..150570 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
DS732_RS30660 () 150608..150970 - 363 WP_000683483.1 hypothetical protein -
DS732_RS30665 () 151686..151958 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
DS732_RS30670 () 151958..152491 + 534 WP_032064504.1 transglycosylase SLT domain-containing protein -
DS732_RS30675 () 152502..153110 + 609 WP_000891157.1 hypothetical protein -
DS732_RS30680 () 153107..153658 + 552 WP_001020646.1 hypothetical protein -
DS732_RS30685 () 153718..154137 - 420 WP_000651490.1 H-NS histone family protein -
DS732_RS30690 () 154139..154432 - 294 WP_000919078.1 hypothetical protein -
DS732_RS30695 () 154449..155432 - 984 WP_000077458.1 ParM/StbA family protein -
DS732_RS30700 () 155931..156470 + 540 WP_001447712.1 hypothetical protein -
DS732_RS30705 () 156475..156762 + 288 WP_000127321.1 hypothetical protein -
DS732_RS30710 () 156747..157847 + 1101 WP_000350011.1 plasmid replication protein -
DS732_RS30725 () 158884..159318 - 435 WP_000883925.1 hypothetical protein -
DS732_RS30730 () 159336..159518 - 183 Protein_178 phosphohydrolase -
DS732_RS30740 () 159706..160893 - 1188 WP_000937614.1 IS91 family transposase IS91 Transposase
DS732_RS30745 () 160893..161258 - 366 WP_000124098.1 hypothetical protein -
DS732_RS30750 () 161345..162280 - 936 Protein_181 phosphoadenosine phosphosulfate reductase family protein -
DS732_RS30755 () 162549..163157 + 609 WP_000849071.1 hypothetical protein -
DS732_RS30760 () 163162..163683 + 522 WP_000393785.1 hypothetical protein -
DS732_RS30765 () 163686..164207 + 522 WP_000805800.1 hypothetical protein -
DS732_RS30770 () 164304..164777 + 474 WP_000057877.1 hypothetical protein -
DS732_RS30775 () 164788..165081 + 294 WP_001370730.1 hypothetical protein -
DS732_RS30780 () 165086..165940 + 855 WP_061602450.1 hypothetical protein -
DS732_RS30785 () 165940..166899 + 960 WP_000829616.1 S49 family peptidase -
DS732_RS30790 () 166915..167775 + 861 WP_000139698.1 DsbA family protein -
DS732_RS30795 () 167809..168237 + 429 WP_000591074.1 hypothetical protein -
DS732_RS30800 () 168294..168653 + 360 WP_000422768.1 hypothetical protein -
DS732_RS30805 () 168653..169099 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
DS732_RS30810 () 169096..169614 + 519 WP_000210756.1 nitrite reductase -
DS732_RS30815 () 169614..169844 + 231 WP_000972663.1 hypothetical protein -
DS732_RS30820 () 169831..170688 + 858 WP_001167032.1 hypothetical protein -
DS732_RS30825 () 170714..170902 + 189 WP_001270411.1 hypothetical protein -
DS732_RS30830 () 170919..171446 + 528 WP_001236377.1 thermonuclease family protein -
DS732_RS30835 () 171504..171776 + 273 WP_001043047.1 HU family DNA-binding protein -
DS732_RS30840 () 171864..172157 + 294 WP_001239997.1 chromosome segregation protein ParM -
DS732_RS30845 () 172184..172486 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
DS732_RS30850 () 172491..172841 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
DS732_RS30855 () 173004..173552 + 549 WP_001061574.1 transcriptional regulator -
DS732_RS30865 () 173893..174087 + 195 WP_000343597.1 hypothetical protein -
DS732_RS30870 () 174098..174469 + 372 WP_000516916.1 hypothetical protein -
DS732_RS30875 () 174462..174932 + 471 WP_001281821.1 hypothetical protein -
DS732_RS30880 () 174947..175282 - 336 WP_000683476.1 hypothetical protein -
DS732_RS30885 () 175379..175867 + 489 WP_001273096.1 DUF1643 domain-containing protein -
DS732_RS30890 () 175870..176367 + 498 WP_000062185.1 hypothetical protein -
DS732_RS30895 () 176582..177286 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
DS732_RS30900 () 177351..177530 - 180 Protein_210 winged helix-turn-helix domain-containing protein -
DS732_RS30905 () 177837..178541 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
DS732_RS31875 () 178547..178687 + 141 WP_001044210.1 hypothetical protein -
DS732_RS30915 () 179173..179910 + 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
DS732_RS30920 () 179907..180131 + 225 WP_000743213.1 hypothetical protein -
DS732_RS30925 () 180342..181835 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
DS732_RS32030 () 182304..182750 + 447 Protein_216 DUF3363 domain-containing protein -
DS732_RS30935 () 182967..184181 + 1215 WP_064987008.1 Bicyclomycin resistance protein ARG
DS732_RS30940 () 184209..184514 + 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
DS732_RS30945 () 184626..186119 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
DS732_RS32035 () 186588..187034 + 447 Protein_220 DUF3363 domain-containing protein -
DS732_RS30955 () 187251..188465 + 1215 WP_064987008.1 Bicyclomycin resistance protein ARG
DS732_RS30960 () 188493..188798 + 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance