MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP031214 Location: 1140616..1172496 Organism: Escherichia coli strain C600 Replicon: chromosome
Accession: NZ_CP031214 Location: 1140616..1172496 Organism: Escherichia coli strain C600 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK885_RS05830 () | 1136800..1138068 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| DK885_RS05835 () | 1138088..1139065 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| DK885_RS05840 () | 1139401..1141653 | - | 2253 | Protein_1072 | alpha-amylase family protein | - |
| DK885_RS23855 () | 1143039..1144412 | + | 1374 | Protein_1073 | DUF5507 domain-containing protein | - |
| DK885_RS05865 () | 1144776..1144985 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| DK885_RS23860 () | 1145140..1145259 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| DK885_RS05875 () | 1145324..1149904 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| DK885_RS05880 () | 1150268..1150597 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| DK885_RS05885 () | 1150618..1150935 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| DK885_RS05890 () | 1150973..1151173 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| DK885_RS05895 () | 1151182..1151664 | - | 483 | WP_001407480.1 | RadC family protein | - |
| DK885_RS05900 () | 1151673..1152131 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| DK885_RS05905 () | 1152234..1152457 | - | 224 | Protein_1082 | DUF905 domain-containing protein | - |
| DK885_RS05910 () | 1153029..1154732 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| DK885_RS05915 () | 1154874..1155883 | + | 1010 | Protein_1084 | arsenic transporter | - |
| DK885_RS05920 () | 1155896..1156210 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| DK885_RS05925 () | 1156435..1156902 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| DK885_RS05930 () | 1156926..1157369 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| DK885_RS05935 () | 1157369..1157605 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| DK885_RS05940 () | 1157646..1158347 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| DK885_RS05945 () | 1158564..1159385 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| DK885_RS05950 () | 1159477..1160340 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| DK885_RS05955 () | 1160695..1161066 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| DK885_RS05960 () | 1161059..1162132 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| DK885_RS05965 () | 1162274..1162537 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| DK885_RS05970 () | 1162897..1164513 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| DK885_RS05975 () | 1164510..1166699 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| DK885_RS05980 () | 1166877..1167503 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| DK885_RS05985 () | 1167656..1169065 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| DK885_RS05990 () | 1169194..1169406 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| DK885_RS05995 () | 1169450..1170406 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| DK885_RS06000 () | 1170650..1171891 | - | 1242 | WP_000101723.1 | Chemotaxis protein methyltransferase ; Integrase | Integrase |
| DK885_RS06010 () | 1172672..1173154 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| DK885_RS06015 () | 1173325..1173762 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| DK885_RS06020 () | 1173752..1174042 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| DK885_RS06025 () | 1174104..1174445 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| DK885_RS06030 () | 1174594..1176255 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| DK885_RS06035 () | 1176341..1177219 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |