MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 74143 bp
Accession: NZ_CP031083 Location: 1..74143 Organism: Paracoccus yeei strain CCUG 32053 Replicon: plasmid pYEE5
Accession: NZ_CP031083 Location: 1..74143 Organism: Paracoccus yeei strain CCUG 32053 Replicon: plasmid pYEE5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PY32053_RS22340 () | 29..1585 | - | 1557 | WP_120445210.1 | IS66 family transposase | - |
| PY32053_RS22345 () | 1638..1991 | - | 354 | WP_120442336.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| PY32053_RS22350 () | 1988..2377 | - | 390 | WP_120442334.1 | transposase | - |
| PY32053_RS22355 () | 2417..2944 | + | 528 | WP_120445212.1 | transposase | - |
| PY32053_RS23675 () | 2859..3101 | - | 243 | WP_199722359.1 | hypothetical protein | - |
| PY32053_RS22360 () | 3381..3641 | - | 261 | WP_120445214.1 | hypothetical protein | - |
| PY32053_RS22365 () | 3778..4725 | + | 948 | WP_120445216.1 | IS30 family transposase | - |
| PY32053_RS22370 () | 4839..5204 | + | 366 | WP_120443392.1 | transposase | - |
| PY32053_RS22375 () | 5204..5557 | + | 354 | WP_120445299.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| PY32053_RS22380 () | 5626..7186 | + | 1561 | Protein_9 | IS66 family transposase | - |
| PY32053_RS22385 () | 7660..8325 | + | 666 | WP_120445218.1 | L,D-transpeptidase | - |
| PY32053_RS22390 () | 8374..8646 | - | 273 | WP_120445220.1 | hypothetical protein | - |
| PY32053_RS22395 () | 8858..9517 | + | 660 | WP_120445221.1 | L,D-transpeptidase | - |
| PY32053_RS22400 () | 9621..10145 | - | 525 | WP_120445223.1 | L,D-transpeptidase family protein | - |
| PY32053_RS22405 () | 10182..10646 | - | 465 | WP_120445224.1 | DUF411 domain-containing protein | - |
| PY32053_RS22410 () | 10643..11257 | - | 615 | WP_120445226.1 | SCO family protein | - |
| PY32053_RS22415 () | 11239..11715 | - | 477 | WP_120445228.1 | copper chaperone PCu(A)C | - |
| PY32053_RS22420 () | 11718..12299 | - | 582 | WP_120445230.1 | SCO family protein | - |
| PY32053_RS22425 () | 12314..12976 | - | 663 | WP_120445232.1 | thioredoxin domain-containing protein | - |
| PY32053_RS22430 () | 12973..13404 | - | 432 | WP_120445301.1 | disulfide bond formation protein B | - |
| PY32053_RS22435 () | 13483..14667 | - | 1185 | WP_158595052.1 | M23 family metallopeptidase | - |
| PY32053_RS22440 () | 15177..15611 | - | 435 | WP_120445235.1 | helix-turn-helix domain-containing protein | - |
| PY32053_RS22445 () | 15701..17956 | + | 2256 | WP_120445303.1 | cadmium-translocating P-type ATPase | - |
| PY32053_RS22450 () | 17961..18584 | + | 624 | WP_120445237.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| PY32053_RS22455 () | 18581..19057 | + | 477 | WP_120445238.1 | signal peptidase II | - |
| PY32053_RS22460 () | 19103..19555 | - | 453 | WP_120445240.1 | manganese-binding transcriptional regulator MntR | - |
| PY32053_RS22465 () | 19653..20975 | + | 1323 | WP_120445242.1 | Nramp family divalent metal transporter | - |
| PY32053_RS22470 () | 21141..22226 | - | 1086 | WP_120445244.1 | DUF475 domain-containing protein | - |
| PY32053_RS22475 () | 22553..22846 | - | 294 | WP_120445246.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PY32053_RS22480 () | 22834..23115 | - | 282 | WP_120445247.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| PY32053_RS22485 () | 23654..24235 | + | 582 | WP_120445249.1 | recombinase family protein | - |
| PY32053_RS22495 () | 24671..25930 | + | 1260 | WP_147405617.1 | AAA family ATPase | - |
| PY32053_RS23105 () | 25927..26970 | + | 1044 | WP_147405619.1 | hypothetical protein | - |
| PY32053_RS22500 () | 26973..28670 | + | 1698 | WP_120445252.1 | DUF262 domain-containing protein | - |
| PY32053_RS22505 () | 29274..30406 | - | 1133 | Protein_34 | IS110 family transposase | - |
| PY32053_RS22510 () | 30978..31682 | + | 705 | Protein_35 | DUF1738 domain-containing protein | - |
| PY32053_RS23400 () | 31855..32022 | + | 168 | WP_158595053.1 | hypothetical protein | - |
| PY32053_RS23110 () | 32303..32959 | - | 657 | WP_147405621.1 | hypothetical protein | - |
| PY32053_RS22520 () | 32959..33678 | - | 720 | WP_080623169.1 | hypothetical protein | - |
| PY32053_RS22525 () | 34443..34991 | + | 549 | WP_158595054.1 | plasmid mobilization relaxosome protein MobC | - |
| PY32053_RS22530 () | 34984..36783 | + | 1800 | WP_147405623.1 | relaxase/mobilization nuclease domain-containing protein | - |
| PY32053_RS22535 () | 36829..37104 | - | 276 | WP_120445305.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PY32053_RS22540 () | 37097..37390 | - | 294 | WP_080623172.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PY32053_RS22545 () | 37503..39614 | - | 2112 | WP_147405624.1 | type IV secretory system conjugative DNA transfer family protein | - |
| PY32053_RS22550 () | 39562..40551 | - | 990 | WP_120445260.1 | Flp pilus assembly complex ATPase component TadA | - |
| PY32053_RS22555 () | 40551..41852 | - | 1302 | WP_158595055.1 | TrbI/VirB10 family protein | - |
| PY32053_RS22560 () | 41857..42567 | - | 711 | WP_120445263.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| PY32053_RS22565 () | 42560..43237 | - | 678 | WP_158595056.1 | type IV secretion system protein | - |
| PY32053_RS22570 () | 43266..44312 | - | 1047 | WP_080623178.1 | type IV secretion system protein | - |
| PY32053_RS22575 () | 44312..44815 | - | 504 | WP_120445265.1 | hypothetical protein | - |
| PY32053_RS22580 () | 44821..45600 | - | 780 | WP_080623180.1 | hypothetical protein | - |
| PY32053_RS22585 () | 45600..46733 | - | 1134 | WP_120445267.1 | lytic transglycosylase domain-containing protein | - |
| PY32053_RS23405 () | 46717..46863 | - | 147 | WP_158595057.1 | hypothetical protein | - |
| PY32053_RS22590 () | 46856..49210 | - | 2355 | WP_120445269.1 | type IV secretion system protein B4 | - |
| PY32053_RS23410 () | 49203..49472 | - | 270 | WP_158595058.1 | VirB3 family type IV secretion system protein | - |
| PY32053_RS23415 () | 49472..49801 | - | 330 | WP_158595059.1 | hypothetical protein | - |
| PY32053_RS22600 () | 49813..50226 | - | 414 | WP_120445306.1 | lytic transglycosylase domain-containing protein | - |
| PY32053_RS22605 () | 50489..50887 | - | 399 | WP_080623184.1 | hypothetical protein | - |
| PY32053_RS22610 () | 51086..51745 | - | 660 | WP_120445273.1 | hypothetical protein | - |
| PY32053_RS22615 () | 51732..52028 | - | 297 | WP_120445275.1 | hypothetical protein | - |
| PY32053_RS22620 () | 52154..52774 | + | 621 | WP_120445277.1 | autoinducer binding domain-containing protein | - |
| PY32053_RS23420 () | 52986..53234 | - | 249 | WP_158595060.1 | hypothetical protein | - |
| PY32053_RS22630 () | 54019..55263 | + | 1245 | WP_158595061.1 | hypothetical protein | - |
| PY32053_RS22635 () | 55251..55598 | + | 348 | WP_080623190.1 | hypothetical protein | - |
| PY32053_RS22645 () | 56314..57348 | - | 1035 | WP_120445308.1 | IS110 family transposase | - |
| PY32053_RS22660 () | 58800..59561 | + | 762 | WP_120445284.1 | damage-inducible protein | - |
| PY32053_RS22665 () | 59476..60993 | + | 1518 | WP_120445286.1 | DNA polymerase Y family protein | - |
| PY32053_RS22670 () | 60993..64256 | + | 3264 | WP_120445288.1 | error-prone DNA polymerase | - |
| PY32053_RS22680 () | 65005..65774 | - | 770 | Protein_69 | IS5 family transposase | - |
| PY32053_RS22690 () | 66456..67979 | + | 1524 | WP_120445291.1 | type I restriction-modification system subunit M | - |
| PY32053_RS22695 () | 67976..69310 | + | 1335 | WP_120445292.1 | restriction endonuclease subunit S | - |
| PY32053_RS22700 () | 69319..69771 | + | 453 | WP_147405626.1 | hypothetical protein | - |
| PY32053_RS22705 () | 69771..70907 | + | 1137 | WP_120445296.1 | DUF4268 domain-containing protein | - |
| PY32053_RS22710 () | 70907..73999 | + | 3093 | WP_120445297.1 | type I restriction endonuclease subunit R | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|